Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4EGY
DownloadVisualize
BU of 4egy by Molmil
Crystal Structure of AraR(DBD) in complex with operator ORA1
分子名称: 5'-D(*AP*AP*AP*AP*TP*TP*GP*TP*TP*CP*GP*TP*AP*CP*AP*AP*AP*TP*AP*TP*T)-3', 5'-D(*TP*AP*AP*TP*AP*TP*TP*TP*GP*TP*AP*CP*GP*AP*AP*CP*AP*AP*TP*TP*T)-3', ACETATE ION, ...
著者Jain, D, Nair, D.T.
登録日2012-04-02
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators.
Nucleic Acids Res., 41, 2013
4EGZ
DownloadVisualize
BU of 4egz by Molmil
Crystal Structure of AraR(DBD) in complex with operator ORR3
分子名称: 5'-D(*AP*AP*AP*TP*TP*TP*GP*TP*CP*CP*GP*TP*AP*TP*AP*CP*AP*TP*TP*TP*T)-3', 5'-D(*TP*AP*AP*AP*AP*TP*GP*TP*AP*TP*AP*CP*GP*GP*AP*CP*AP*AP*AP*TP*T)-3', ACETATE ION, ...
著者Jain, D, Nair, D.T.
登録日2012-04-02
公開日2013-02-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators.
Nucleic Acids Res., 41, 2013
4H0E
DownloadVisualize
BU of 4h0e by Molmil
Crystal Structure of mutant ORR3 in complex with NTD of AraR
分子名称: 5'-D(*AP*AP*AP*TP*TP*TP*GP*TP*CP*CP*GP*TP*AP*CP*AP*TP*TP*TP*TP*AP*T)-3', 5'-D(*TP*AP*TP*AP*AP*AP*AP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*AP*AP*TP*T)-3', ACETATE ION, ...
著者Nair, D.T, Jain, D.
登録日2012-09-08
公開日2013-02-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.973 Å)
主引用文献Spacing between core recognition motifs determines relative orientation of AraR monomers on bipartite operators.
Nucleic Acids Res., 41, 2013
4MGR
DownloadVisualize
BU of 4mgr by Molmil
The crystal structure of Bacillus subtilis GabR, an autorepressor and PLP- and GABA-dependent transcriptional activator of gabT
分子名称: ACETATE ION, HTH-type transcriptional regulatory protein GabR, IMIDAZOLE, ...
著者Wu, R, Edayathumangalam, R, Garcia, R, Wang, Y, Wang, W, Kreinbring, C.A, Bach, A, Liao, J, Stone, T, Terwilliger, T, Hoang, Q.Q, Belitsky, B.R, Petsko, G.A, Ringe, D, Liu, D.
登録日2013-08-28
公開日2013-10-30
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4N0B
DownloadVisualize
BU of 4n0b by Molmil
Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of GabT
分子名称: ACETYL GROUP, CALCIUM ION, HTH-type transcriptional regulatory protein GabR, ...
著者Edayathumangalam, R, Wu, R, Garcia, R, Wang, Y, Wang, W, Kreinbring, C.A, Bach, A, Liao, J, Stone, T, Terwilliger, T, Hoang, Q.Q, Belitsky, B.R, Petsko, G.A, Ringe, D, Liu, D.
登録日2013-10-01
公開日2013-10-30
最終更新日2014-04-02
実験手法X-RAY DIFFRACTION (2.705 Å)
主引用文献Crystal structure of Bacillus subtilis GabR, an autorepressor and transcriptional activator of gabT.
Proc.Natl.Acad.Sci.USA, 110, 2013
4R1H
DownloadVisualize
BU of 4r1h by Molmil
GntR family transcriptional regulator from Listeria monocytogenes
分子名称: ACETATE ION, Lmo0741 protein
著者Osipiuk, J, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2014-08-05
公開日2014-08-20
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献GntR family transcriptional regulator from Listeria monocytogenes
To be Published
4TV7
DownloadVisualize
BU of 4tv7 by Molmil
Crystal structure of Bacillus subtilis GabR at 2.05 Angstroms resolution
分子名称: HTH-type transcriptional regulatory protein GabR
著者Goto, M, Okuda, K, Yoshimura, T.
登録日2014-06-26
公開日2014-12-24
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Role of the aminotransferase domain in Bacillus subtilis GabR, a pyridoxal 5'-phosphate-dependent transcriptional regulator
Mol. Microbiol., 95, 2015
4U0V
DownloadVisualize
BU of 4u0v by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with glucosamine-6-phosphate
分子名称: 1,2-ETHANEDIOL, 2-amino-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, HTH-type transcriptional repressor YvoA
著者Fillenberg, S.B, Muller, Y.A.
登録日2014-07-14
公開日2015-01-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.051 Å)
主引用文献Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4U0W
DownloadVisualize
BU of 4u0w by Molmil
Crystal structure of YvoA from Bacillus subtilis in complex with N-acetylglucosamine-6-phosphate
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-6-O-phosphono-alpha-D-glucopyranose, GLYCEROL, ...
著者Fillenberg, S.B, Muller, Y.A.
登録日2014-07-14
公開日2015-01-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4U0Y
DownloadVisualize
BU of 4u0y by Molmil
Crystal structure of the DNA-binding domains of YvoA in complex with palindromic operator DNA
分子名称: CHLORIDE ION, DNA (5'-D(P*GP*TP*GP*GP*TP*CP*TP*AP*GP*AP*CP*CP*AP*CP*T)-3'), HTH-type transcriptional repressor YvoA
著者Fillenberg, S.B, Muller, Y.A.
登録日2014-07-14
公開日2015-01-14
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4WWC
DownloadVisualize
BU of 4wwc by Molmil
Crystal structure of full length YvoA in complex with palindromic operator DNA
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(P*CP*AP*GP*TP*GP*GP*TP*CP*TP*AP*GP*AP*CP*CP*AP*CP*TP*GP*G)-3'), HTH-type transcriptional repressor YvoA
著者Grau, F.C, Fillenberg, S.B, Muller, Y.A.
登録日2014-11-10
公開日2015-01-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Structural insight into operator dre-sites recognition and effector binding in the GntR/HutC transcription regulator NagR.
Nucleic Acids Res., 43, 2015
4P96
DownloadVisualize
BU of 4p96 by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae
分子名称: Fatty acid metabolism regulator protein
著者Shi, W, Kull, F.J.
登録日2014-04-02
公開日2015-02-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
4P9U
DownloadVisualize
BU of 4p9u by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with DNA
分子名称: DNA (31-MER), Fatty acid metabolism regulator protein
著者Kull, F.J, Shi, W.
登録日2014-04-05
公開日2015-02-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.208 Å)
主引用文献The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
4PDK
DownloadVisualize
BU of 4pdk by Molmil
FadR, Fatty Acid Responsive Transcription Factor from Vibrio cholerae, in Complex with oleoyl-CoA
分子名称: Fatty acid metabolism regulator protein, S-{(3R,5R,9R)-1-[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)tetrahydrofuran-2-yl]-3,5,9-trihydroxy-8,8-dimethyl-3,5-dioxido-10,14-dioxo-2,4,6-trioxa-11,15-diaza-3lambda~5~,5lambda~5~-diphosphaheptadecan-17-yl} (9Z)-octadec-9-enethioate (non-preferred name)
著者Shi, W, Kull, F.J.
登録日2014-04-19
公開日2015-02-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The 40-residue insertion in Vibrio cholerae FadR facilitates binding of an additional fatty acyl-CoA ligand.
Nat Commun, 6, 2015
5D4S
DownloadVisualize
BU of 5d4s by Molmil
Crystal Structure of AraR(DBD) in complex with operator ORX1
分子名称: Arabinose metabolism transcriptional repressor, DNA (5'-D(*AP*AP*AP*TP*AP*CP*AP*TP*AP*CP*GP*TP*AP*CP*AP*AP*AP*TP*AP*TP*T)-3'), DNA (5'-D(*TP*AP*AP*TP*AP*TP*TP*TP*GP*TP*AP*CP*GP*TP*AP*TP*GP*TP*AP*TP*T)-3')
著者Jain, D, Narayanan, N, Nair, D.T.
登録日2015-08-08
公開日2015-11-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.972 Å)
主引用文献Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.
J.Biol.Chem., 291, 2016
5D4R
DownloadVisualize
BU of 5d4r by Molmil
Crystal Structure of AraR(DBD) in complex with operator ORE1
分子名称: Arabinose metabolism transcriptional repressor, DNA (5'-D(*AP*TP*AP*TP*TP*TP*GP*TP*AP*CP*GP*TP*AP*CP*TP*AP*AP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*TP*TP*AP*GP*TP*AP*CP*GP*TP*AP*CP*AP*AP*AP*TP*A)-3')
著者Jain, D, Narayanan, N, Nair, D.T.
登録日2015-08-08
公開日2015-11-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Plasticity in Repressor-DNA Interactions Neutralizes Loss of Symmetry in Bipartite Operators.
J.Biol.Chem., 291, 2016
4ZS8
DownloadVisualize
BU of 4zs8 by Molmil
Crystal structure of ligand-free, full length DasR
分子名称: 1,2-ETHANEDIOL, HTH-type transcriptional repressor DasR
著者Fillenberg, S.B, Muller, Y.A.
登録日2015-05-13
公開日2016-06-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal Structures of the Global Regulator DasR from Streptomyces coelicolor: Implications for the Allosteric Regulation of GntR/HutC Repressors.
Plos One, 11, 2016
5KVR
DownloadVisualize
BU of 5kvr by Molmil
X-Ray Crystal Structure of a Fragment (1-75) of a Transcriptional Regulator PdhR from Escherichia coli CFT073
分子名称: Pyruvate dehydrogenase complex repressor
著者Brunzelle, J.S, Wawrzak, Z, Sandoval, J, Skarina, T, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-07-15
公開日2016-11-02
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.36 Å)
主引用文献X-Ray Crystal Structure of a Fragment (1-75) of a Transcriptional Regulator PdhR from Escherichia coli CFT073
To Be Published
5XGF
DownloadVisualize
BU of 5xgf by Molmil
The fatty acid-responsive FadR repressor of Vibrio alginolyticus
分子名称: Fatty acid metabolism regulator protein, NICKEL (II) ION
著者Lin, Y, Li, D.F, Feng, Y.J.
登録日2017-04-13
公開日2017-05-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Snapshort of Vibrio FadR-ligand complex structure reveals a new mechanism for bacterial fatty acid sensing
To Be Published
6AZ6
DownloadVisualize
BU of 6az6 by Molmil
Streptococcus agalactiae GntR
分子名称: GntR family transcriptional regulator
著者Pellock, S.J, Redinbo, M.R.
登録日2017-09-10
公開日2017-12-20
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.909 Å)
主引用文献Structural basis for the regulation of beta-glucuronidase expression by human gut Enterobacteriaceae.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6EP3
DownloadVisualize
BU of 6ep3 by Molmil
Lar controls the expression of the Listeria monocytogenes agr system and mediates virulence.
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Lmo0651 protein, ...
著者Pinheiro, J, Lisboa, J, Carvalho, F, Carreaux, A, Santos, N, Cabral, J, Sousa, S, Cabanes, D.
登録日2017-10-10
公開日2018-07-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献MouR controls the expression of the Listeria monocytogenes Agr system and mediates virulence.
Nucleic Acids Res., 46, 2018
6SBS
DownloadVisualize
BU of 6sbs by Molmil
YtrA from Sulfolobus acidocaldarius, a GntR-family transcription factor
分子名称: Regulatory protein
著者Lemmens, L, Valegard, K, Lindas, A.C, Peeters, E, Maes, D.
登録日2019-07-22
公開日2019-07-31
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献YtrASa, a GntR-Family Transcription Factor, Represses Two Genetic Loci Encoding Membrane Proteins inSulfolobus acidocaldarius.
Front Microbiol, 10, 2019
6ON4
DownloadVisualize
BU of 6on4 by Molmil
Crystal structure of the GntR-type sialoregulator NanR from Escherichia coli, in complex with sialic acid
分子名称: HTH-type transcriptional repressor NanR, N-acetyl-beta-neuraminic acid, ZINC ION, ...
著者Horne, C.R, Panjikar, S, North, R.A, Dobson, R.C.J.
登録日2019-04-19
公開日2020-07-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Control of the Escherichia coli sialoregulon by transcriptional repressor NanR.
J. Bacteriol., 195, 2013
6ZA0
DownloadVisualize
BU of 6za0 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) in complex with a fortuitous citrate from agrobacterium fabrum (P21212 space group)
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
著者Morera, S, Vigouroux, A, Legrand, P.
登録日2020-06-04
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021
6ZA3
DownloadVisualize
BU of 6za3 by Molmil
Structure of the transcriptional repressor Atu1419 (VanR) from agrobacterium fabrum in complex a palindromic DNA (C2221 space group)
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CHLORIDE ION, ...
著者Morera, S, Vigouroux, A, Legrand, P.
登録日2020-06-04
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Characterization of the first tetrameric transcription factor of the GntR superfamily with allosteric regulation from the bacterial pathogen Agrobacterium fabrum.
Nucleic Acids Res., 49, 2021

219869

件を2024-05-15に公開中

PDB statisticsPDBj update infoContact PDBjnumon