Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5QQT
DownloadVisualize
BU of 5qqt by Molmil
PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z2856434834
Descriptor: 5-aminolevulinate synthase, erythroid-specific, mitochondrial, ...
Authors:Bezerra, G.A, Foster, W, Bailey, H, Shrestha, L, Krojer, T, Talon, R, Brandao-Neto, J, Douangamath, A, Nicola, B.B, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Brennan, P.E, Yue, W.W.
Deposit date:2019-05-22
Release date:2019-08-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:PanDDA analysis group deposition
To Be Published
5QR8
DownloadVisualize
BU of 5qr8 by Molmil
PanDDA analysis group deposition -- Crystal Structure of human ALAS2A in complex with Z57258487
Descriptor: 5-aminolevulinate synthase, erythroid-specific, mitochondrial, ...
Authors:Bezerra, G.A, Foster, W, Bailey, H, Shrestha, L, Krojer, T, Talon, R, Brandao-Neto, J, Douangamath, A, Nicola, B.B, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Brennan, P.E, Yue, W.W.
Deposit date:2019-05-22
Release date:2019-08-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:PanDDA analysis group deposition
To Be Published
5QT3
DownloadVisualize
BU of 5qt3 by Molmil
Ground state model of human erythroid-specific 5'-aminolevulinate synthase, ALAS2 - SGC Diamond Xchem fragment screening
Descriptor: 5-aminolevulinate synthase, erythroid-specific, mitochondrial, ...
Authors:Bezerra, G.A, Foster, W, Bailey, H, Shrestha, L, Krojer, T, Talon, R, Brandao-Neto, J, Douangamath, A, Nicola, B.B, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Brennan, P.E, Yue, W.W.
Deposit date:2019-06-28
Release date:2019-08-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:PanDDA analysis group deposition of ground-state model
To Be Published
1BKG
DownloadVisualize
BU of 1bkg by Molmil
ASPARTATE AMINOTRANSFERASE FROM THERMUS THERMOPHILUS WITH MALEATE
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, MALEIC ACID
Authors:Nakai, T, Okada, K, Kuramitsu, S, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1998-07-07
Release date:1999-07-22
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate.
Biochemistry, 38, 1999
1GEX
DownloadVisualize
BU of 1gex by Molmil
CRYSTAL STRUCTURE OF HISTIDINOL-PHOSPHATE AMINOTRANSFERASE COMPLEXED WITH HISTIDINOL-PHOSPHATE
Descriptor: HISTIDINOL-PHOSPHATE AMINOTRANSFERASE, PHOSPHORIC ACID MONO-[2-AMINO-3-(3H-IMIDAZOL-4-YL)-PROPYL]ESTER, PYRIDOXAL-5'-PHOSPHATE
Authors:Haruyama, K, Nakai, T, Miyahara, I, Hirotsu, K, Mizuguchi, H, Hayashi, H, Kagamiyama, H.
Deposit date:2000-11-30
Release date:2001-04-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Escherichia coli histidinol-phosphate aminotransferase and its complexes with histidinol-phosphate and N-(5'-phosphopyridoxyl)-L-glutamate: double substrate recognition of the enzyme.
Biochemistry, 40, 2001
3AOW
DownloadVisualize
BU of 3aow by Molmil
Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with AKG
Descriptor: 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207
Authors:Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S.
Deposit date:2010-10-07
Release date:2011-10-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine
To be Published
1DJU
DownloadVisualize
BU of 1dju by Molmil
CRYSTAL STRUCTURE OF AROMATIC AMINOTRANSFERASE FROM PYROCOCCUS HORIKOSHII OT3
Descriptor: AROMATIC AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Matsui, I, Matsui, E, Sakai, Y, Kikuchi, H, Kawarabayashi, H.
Deposit date:1999-12-06
Release date:2001-04-11
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The molecular structure of hyperthermostable aromatic aminotransferase with novel substrate specificity from Pyrococcus horikoshii.
J.Biol.Chem., 275, 2000
1GDE
DownloadVisualize
BU of 1gde by Molmil
CRYSTAL STRUCTURE OF PYROCOCCUS PROTEIN A-1 E-FORM
Descriptor: ASPARTATE AMINOTRANSFERASE, GLUTAMIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Ura, H, Harata, K, Matsui, I, Kuramitsu, S.
Deposit date:2000-09-23
Release date:2001-09-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Temperature dependence of the enzyme-substrate recognition mechanism.
J.Biochem., 129, 2001
2ZY4
DownloadVisualize
BU of 2zy4 by Molmil
dodecameric L-aspartate beta-decarboxylase
Descriptor: CHLORIDE ION, L-aspartate beta-decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Chen, H.-J, Ko, T.-P, Lee, C.-Y, Wang, N.-C, Wang, A.H.-J.
Deposit date:2009-01-13
Release date:2009-01-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure, Assembly, and Mechanism of a PLP-Dependent Dodecameric l-Aspartate beta-Decarboxylase
Structure, 17, 2009
3A2B
DownloadVisualize
BU of 3a2b by Molmil
Crystal Structure of Serine Palmitoyltransferase from Sphingobacterium multivorum with substrate L-serine
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SERINE, Serine palmitoyltransferase
Authors:Okamoto, A, Hoseki, J.
Deposit date:2009-05-09
Release date:2009-07-14
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Insights into the Enzymatic Mechanism of Serine Palmitoyltransferase from Sphingobacterium multivorum
J.Biochem., 146, 2009
3AAT
DownloadVisualize
BU of 3aat by Molmil
ACTIVITY AND STRUCTURE OF THE ACTIVE-SITE MUTANTS R386Y AND R386F OF ESCHERICHIA COLI ASPARTATE AMINOTRANSFERASE
Descriptor: ASPARTATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION
Authors:Danishefsky, A.T, Ringe, D, Petsko, G.A.
Deposit date:1990-12-06
Release date:1992-01-15
Last modified:2012-07-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Activity and structure of the active-site mutants R386Y and R386F of Escherichia coli aspartate aminotransferase.
Biochemistry, 30, 1991
1D2F
DownloadVisualize
BU of 1d2f by Molmil
X-RAY STRUCTURE OF MALY FROM ESCHERICHIA COLI: A PYRIDOXAL-5'-PHOSPHATE-DEPENDENT ENZYME ACTING AS A MODULATOR IN MAL GENE EXPRESSION
Descriptor: MALY PROTEIN, PYRIDOXAL-5'-PHOSPHATE
Authors:Clausen, T.
Deposit date:1999-09-23
Release date:2000-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure of MalY from Escherichia coli: a pyridoxal 5'-phosphate-dependent enzyme acting as a modulator in mal gene expression.
EMBO J., 19, 2000
1CZC
DownloadVisualize
BU of 1czc by Molmil
ASPARTATE AMINOTRANSFERASE MUTANT ATB17/139S/142N WITH GLUTARIC ACID
Descriptor: GLUTARIC ACID, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Okamoto, A, Oue, S, Yano, T, Kagamiyama, H.
Deposit date:1999-09-02
Release date:2000-02-28
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cocrystallization of a mutant aspartate aminotransferase with a C5-dicarboxylic substrate analog: structural comparison with the enzyme-C4-dicarboxylic analog complex.
J.Biochem.(Tokyo), 127, 2000
1CQ8
DownloadVisualize
BU of 1cq8 by Molmil
ASPARTATE AMINOTRANSFERASE (E.C. 2.6.1.1) COMPLEXED WITH C6-PYRIDOXAL-5P-PHOSPHATE
Descriptor: 2-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID, ASPARTATE AMINOTRANSFERASE (2.6.1.1)
Authors:Ishijima, J, Nakai, T, Kawaguchi, S, Hirotsu, K, Kuramitsu, S.
Deposit date:1999-08-06
Release date:2000-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Free energy requirement for domain movement of an enzyme
J.Biol.Chem., 275, 2000
3CBF
DownloadVisualize
BU of 3cbf by Molmil
Crystal structure of LysN, alpha-aminoadipate aminotransferase, from Thermus thermophilus HB27
Descriptor: (2S)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]hexanedioic acid, Alpha-aminodipate aminotransferase
Authors:Tomita, T, Miyazaki, T, Miyagawa, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
Deposit date:2008-02-21
Release date:2009-01-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Mechanism for multiple-substrates recognition of alpha-aminoadipate aminotransferase from Thermus thermophilus
Proteins, 2008
1H1C
DownloadVisualize
BU of 1h1c by Molmil
Histidinol-phosphate aminotransferase (HisC) from Thermotoga maritima
Descriptor: HISTIDINOL-PHOSPHATE AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Vega, M.C, Fernandez, F.J, Wilmanns, M.
Deposit date:2002-07-08
Release date:2004-03-19
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural Studies of the Catalytic Reaction Pathway of a Hyperthermophilic Histidinol-Phosphate Aminotransferase
J.Biol.Chem., 279, 2004
3EI9
DownloadVisualize
BU of 3ei9 by Molmil
Crystal structure of K270N variant of LL-diaminopimelate aminotransferase from Arabidopsis thaliana complexed with L-Glu: External aldimine form
Descriptor: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-glutamic acid, GLYCEROL, LL-diaminopimelate aminotransferase, ...
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008
3E2Y
DownloadVisualize
BU of 3e2y by Molmil
Crystal structure of mouse kynurenine aminotransferase III in complex with glutamine
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GLUTAMINE, GLYCEROL, ...
Authors:Han, Q, Robinson, R, Cai, T, Tagle, D.A, Li, J.
Deposit date:2008-08-06
Release date:2008-12-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Correction for Han et al., "Biochemical and Structural Properties of Mouse Kynurenine Aminotransferase III".
Mol. Cell. Biol., 38, 2018
3EI8
DownloadVisualize
BU of 3ei8 by Molmil
Crystal structure of K270N variant of LL-diaminopimelate aminotransferase from Arabidopsis thaliana complexed with LL-DAP: External aldimine form
Descriptor: (2S,6S)-2-amino-6-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}heptanedioic acid, GLYCEROL, LL-diaminopimelate aminotransferase, ...
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008
3E2Z
DownloadVisualize
BU of 3e2z by Molmil
Crystal structure of mouse kynurenine aminotransferase III in complex with kynurenine
Descriptor: (2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, GLYCEROL, ...
Authors:Han, Q, Robinson, R, Cai, T, Tagle, D.A, Li, J.
Deposit date:2008-08-06
Release date:2008-12-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Correction for Han et al., "Biochemical and Structural Properties of Mouse Kynurenine Aminotransferase III".
Mol. Cell. Biol., 38, 2018
3EIB
DownloadVisualize
BU of 3eib by Molmil
Crystal structure of K270N variant of LL-diaminopimelate aminotransferase from Arabidopsis thaliana
Descriptor: GLYCEROL, LL-diaminopimelate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008
3EI6
DownloadVisualize
BU of 3ei6 by Molmil
Crystal structure of LL-diaminopimelate aminotransferase from Arabidopsis thaliana complexed with PLP-DAP: an external aldimine mimic
Descriptor: (2S,6S)-2-amino-6-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]heptanedioic acid, GLYCEROL, LL-diaminopimelate aminotransferase, ...
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008
3EI5
DownloadVisualize
BU of 3ei5 by Molmil
Crystal structure of LL-diaminopimelate aminotransferase from Arabidopsis thaliana complexed with PLP-Glu: an external aldimine mimic
Descriptor: GLYCEROL, LL-diaminopimelate aminotransferase, N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acid, ...
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008
3EIA
DownloadVisualize
BU of 3eia by Molmil
Crystal structure of K270Q variant of LL-diaminopimelate aminotransferase from Arabidopsis thaliana complexed with L-Glu: External aldimine form
Descriptor: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-glutamic acid, LL-diaminopimelate aminotransferase, SULFATE ION
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008
3EI7
DownloadVisualize
BU of 3ei7 by Molmil
Crystal structure of apo-LL-diaminopimelate aminotransferase from Arabidopsis thaliana (no PLP)
Descriptor: LL-diaminopimelate aminotransferase, SULFATE ION
Authors:Watanabe, N, Clay, M.D, van Belkum, M.J, Cherney, M.M, Vederas, J.C, James, M.N.G.
Deposit date:2008-09-15
Release date:2008-10-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Mechanism of substrate recognition and PLP-induced conformational changes in LL-diaminopimelate aminotransferase from Arabidopsis thaliana.
J.Mol.Biol., 384, 2008

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon