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7AQ0
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BU of 7aq0 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, D576A/S550A
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.584 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ2
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BU of 7aq2 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583A
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.683 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ3
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BU of 7aq3 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583D
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.639 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ4
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BU of 7aq4 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583E
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.708 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ5
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BU of 7aq5 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583N
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ6
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BU of 7aq6 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583F
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.514 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ7
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BU of 7aq7 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583Y
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.608 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ8
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BU of 7aq8 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583Y/D576A
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQ9
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BU of 7aq9 by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H583W
Descriptor: (MU-4-SULFIDO)-TETRA-NUCLEAR COPPER ION, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-13
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.585 Å)
Cite:Histidine-Gated Proton-Coupled Electron Transfer to the Cu A Site of Nitrous Oxide Reductase.
J.Am.Chem.Soc., 143, 2021
7AQA
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BU of 7aqa by Molmil
Pseudomonas stutzeri nitrous oxide reductase mutant, H382A
Descriptor: (dicuprio-$l^{3}-sulfanyl)-sulfanyl-copper, 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Zhang, L, Bill, E, Kroneck, P.M.H, Einsle, O.
Deposit date:2020-10-20
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.497 Å)
Cite:A [3Cu:2S] cluster provides insight into the assembly and function of the Cu Z site of nitrous oxide reductase.
Chem Sci, 12, 2021
7ATE
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BU of 7ate by Molmil
Cytochrome c oxidase structure in P-state
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, ...
Authors:Kolbe, F, Safarian, S, Michel, H.
Deposit date:2020-10-30
Release date:2021-12-01
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Cytochrome c oxidase structure in P-state
To Be Published
7ATN
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BU of 7atn by Molmil
Cytochrome c oxidase structure in R-state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, COPPER (II) ION, ...
Authors:Kolbe, F, Safarian, S, Michel, H.
Deposit date:2020-10-30
Release date:2021-12-01
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Cytochrome c oxidase structure in R-state
To Be Published
7AU3
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BU of 7au3 by Molmil
Cytochrome c oxidase structure in F-state
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, CALCIUM ION, COPPER (II) ION, ...
Authors:Kolbe, F, Safarian, S, Michel, H.
Deposit date:2020-11-02
Release date:2021-12-01
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Cytochrome c oxidase structure in F-state
To Be Published
7AU6
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BU of 7au6 by Molmil
Cytochrome c oxidase structure in O-state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, COPPER (II) ION, ...
Authors:Kolbe, F, Safarian, S, Michel, H.
Deposit date:2020-11-02
Release date:2021-12-01
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Cytochrome c oxidase structure in O-state
To Be Published
7COH
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BU of 7coh by Molmil
Dimeric Form of Bovine Heart Cytochrome c Oxidase in the Fully Oxidized State
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, 1,2-ETHANEDIOL, ...
Authors:Shinzawa-Itoh, K, Muramoto, K.
Deposit date:2020-08-04
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The 1.3-A Resolution structure of bovine cytochrome c oxidase suggests a dimerization mechanism
Biochim.Biophys.Acta, 2021
7CP5
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BU of 7cp5 by Molmil
Bovine heart cytochrome c oxidase in a catalytic intermediate of E at 1.76 angstrom resolution
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Tsukihara, T, Shimada, A.
Deposit date:2020-08-06
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Critical roles of the Cu B site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates.
J.Biol.Chem., 297, 2021
7CUB
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BU of 7cub by Molmil
2.55-Angstrom Cryo-EM structure of Cytochrome bo3 from Escherichia coli in Native Membrane
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome bo(3) ubiquinol oxidase subunit 1, ...
Authors:Li, J, Han, L, Gennis, R.B, Zhu, J.P, Zhang, K.
Deposit date:2020-08-22
Release date:2021-08-25
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Cryo-EM structures of Escherichia coli cytochrome bo3 reveal bound phospholipids and ubiquinone-8 in a dynamic substrate binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CUQ
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BU of 7cuq by Molmil
2.55-Angstrom Cryo-EM structure of Cytochrome bo3 from Escherichia coli in Native Membrane
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome bo(3) ubiquinol oxidase subunit 1, ...
Authors:Li, J, Han, L, Gennis, R.B, Zhu, J.P, Zhang, K.
Deposit date:2020-08-24
Release date:2021-08-25
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Cryo-EM structures of Escherichia coli cytochrome bo3 reveal bound phospholipids and ubiquinone-8 in a dynamic substrate binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7CUW
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BU of 7cuw by Molmil
Ubiquinol Binding Site of Cytochrome bo3 from Escherichia coli
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, COPPER (II) ION, Cytochrome bo(3) ubiquinol oxidase subunit 1, ...
Authors:Li, J, Han, L, Gennis, R.B, Zhu, J.P, Zhang, K.
Deposit date:2020-08-25
Release date:2021-08-25
Last modified:2022-03-09
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Cryo-EM structures of Escherichia coli cytochrome bo3 reveal bound phospholipids and ubiquinone-8 in a dynamic substrate binding site.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D5W
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BU of 7d5w by Molmil
Bovine heart cytochrome c oxidase in a catalytic intermediate of O at 1.84 angstrom resolution
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Tsukihara, T, Shimada, A.
Deposit date:2020-09-28
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Critical roles of the Cu B site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates.
J.Biol.Chem., 297, 2021
7D5X
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BU of 7d5x by Molmil
Bovine heart cytochrome c oxidase in a catalytic intermediate, IO10, at 1.74 angstrom resolution
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
Authors:Tsukihara, T, Shimada, A.
Deposit date:2020-09-28
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Critical roles of the Cu B site in efficient proton pumping as revealed by crystal structures of mammalian cytochrome c oxidase catalytic intermediates.
J.Biol.Chem., 297, 2021
7DEG
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BU of 7deg by Molmil
Cryo-EM structure of a heme-copper terminal oxidase dimer provides insights into its catalytic mechanism
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-[(2~{E},6~{E},10~{Z},14~{Z},18~{Z},23~{R})-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18-pentaenyl]naphthalene-1,4-dione, ...
Authors:Fei, S, Hartmut, M, Yun, Z, Guoliang, Z, Shuangbo, Z.
Deposit date:2020-11-04
Release date:2021-08-04
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The Unusual Homodimer of a Heme-Copper Terminal Oxidase Allows Itself to Utilize Two Electron Donors.
Angew.Chem.Int.Ed.Engl., 60, 2021
7DGQ
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BU of 7dgq by Molmil
Activity optimized supercomplex state1
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (5 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGR
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BU of 7dgr by Molmil
Activity optimized supercomplex state2
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022
7DGS
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BU of 7dgs by Molmil
Activity optimized supercomplex state3
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ...
Authors:Jeon, T.J, Lee, S.G, Yoo, S.H, Ryu, J.H, Kim, D.S, Hyun, J.K, Kim, H.M, Ryu, S.E.
Deposit date:2020-11-12
Release date:2022-05-18
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:A Dynamic Substrate Pool Revealed by cryo-EM of a Lipid-Preserved Respiratory Supercomplex.
Antioxid.Redox Signal., 2022

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PDB entries from 2024-05-15

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