Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3TI5
DownloadVisualize
BU of 3ti5 by Molmil
Crystal structure of 2009 pandemic H1N1 neuraminidase complexed with Zanamivir
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011
3TI6
DownloadVisualize
BU of 3ti6 by Molmil
Crystal structure of 2009 pandemic H1N1 neuraminidase complexed with oseltamivir
Descriptor: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-23
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011
3TIB
DownloadVisualize
BU of 3tib by Molmil
Crystal structure of 1957 pandemic H2N2 neuraminidase complexed with laninamivir octanoate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-9-O-octanoyl-D-glycero-D-galacto-non-2-enonic acid, CALCIUM ION, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011
3TI3
DownloadVisualize
BU of 3ti3 by Molmil
Crystal structure of 2009 pandemic H1N1 neuraminidase complexed with laninamivir
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5-acetamido-2,6-anhydro-4-carbamimidamido-3,4,5-trideoxy-7-O-methyl-D-glycero-D-galacto-non-2-enonic acid, ...
Authors:Vavricka, C.J, Li, Q, Wu, Y, Qi, J, Wang, M, Liu, Y, Gao, F, Liu, J, Feng, E, He, J, Wang, J, Liu, H, Jiang, H, Gao, G.F.
Deposit date:2011-08-20
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and functional analysis of laninamivir and its octanoate prodrug reveals group specific mechanisms for influenza NA inhibition
Plos Pathog., 7, 2011
4HUN
DownloadVisualize
BU of 4hun by Molmil
MATE transporter NorM-NG in complex with R6G and monobody
Descriptor: Multidrug efflux protein, RHODAMINE 6G, protein B
Authors:Lu, M.
Deposit date:2012-11-02
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Structures of a Na+-coupled, substrate-bound MATE multidrug transporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HUL
DownloadVisualize
BU of 4hul by Molmil
MATE transporter NorM-NG in complex with Cs+ and monobody
Descriptor: CESIUM ION, Multidrug efflux protein, Protein B
Authors:Lu, M.
Deposit date:2012-11-02
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Structures of a Na+-coupled, substrate-bound MATE multidrug transporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HUK
DownloadVisualize
BU of 4huk by Molmil
MATE transporter NorM-NG in complex with TPP and monobody
Descriptor: Multidrug efflux protein, Protein B, TETRAPHENYLPHOSPHONIUM
Authors:Lu, M.
Deposit date:2012-11-02
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Structures of a Na+-coupled, substrate-bound MATE multidrug transporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HUM
DownloadVisualize
BU of 4hum by Molmil
MATE transporter NorM-NG in complex with ethidium and monobody
Descriptor: ETHIDIUM, Multidrug efflux protein, Protein B
Authors:Lu, M.
Deposit date:2012-11-02
Release date:2013-02-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.49 Å)
Cite:Structures of a Na+-coupled, substrate-bound MATE multidrug transporter.
Proc.Natl.Acad.Sci.USA, 110, 2013
3K0G
DownloadVisualize
BU of 3k0g by Molmil
Crystal Structure of CNG mimicking NaK mutant, NaK-ETPP, Na+ complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Potassium channel protein NaK, SODIUM ION
Authors:Jiang, Y, Derebe, M.G.
Deposit date:2009-09-24
Release date:2011-01-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural studies of ion permeation and Ca2+ blockage of a bacterial channel mimicking the cyclic nucleotide-gated channel pore.
Proc.Natl.Acad.Sci.USA, 108, 2011
7T9F
DownloadVisualize
BU of 7t9f by Molmil
Structure of VcINDY-apo
Descriptor: DASS family sodium-coupled anion symporter
Authors:Sauer, D.B, Marden, J.J, Song, J.M, Wang, D.N.
Deposit date:2021-12-19
Release date:2022-05-25
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Structural basis of ion - substrate coupling in the Na + -dependent dicarboxylate transporter VcINDY.
Nat Commun, 13, 2022
3LDE
DownloadVisualize
BU of 3lde by Molmil
High resolution open MthK pore structure crystallized in 100 mM K+ and further soaked in 100 mM Na+.
Descriptor: Calcium-gated potassium channel mthK, SODIUM ION
Authors:Ye, S.
Deposit date:2010-01-12
Release date:2010-08-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Novel insights into K(+) selectivity from high-resolution structures of an open K(+) channel pore.
Nat.Struct.Mol.Biol., 17, 2010
6BV7
DownloadVisualize
BU of 6bv7 by Molmil
NMR structure of Sodium/Calcium Exchanger 1 (NCX1) Two-helix Bundle (THB) domain
Descriptor: Sodium/calcium exchanger 1
Authors:Yuan, J, Yuan, C, Bruschweiler, R.
Deposit date:2017-12-12
Release date:2018-06-20
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The Intracellular Loop of the Na+/Ca2+Exchanger Contains an "Awareness Ribbon"-Shaped Two-Helix Bundle Domain.
Biochemistry, 57, 2018
3IGA
DownloadVisualize
BU of 3iga by Molmil
Potassium Channel KcsA-Fab complex in Li+ and K+
Descriptor: Antibody Fab Fragment heavy chain, Antibody Fab fragment light chain, DIACYL GLYCEROL, ...
Authors:Thompson, A.N, Ilsoo, K, Panosian, T.D, Iverson, T.M, Allen, T.W, Nimigean, C.M.
Deposit date:2009-07-27
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Mechanism of potassium-channel selectivity revealed by Na(+) and Li(+) binding sites within the KcsA pore.
Nat.Struct.Mol.Biol., 16, 2009
6ZBI
DownloadVisualize
BU of 6zbi by Molmil
Ternary complex of Calmodulin bound to 2 molecules of NHE1
Descriptor: CALCIUM ION, Calmodulin-1, Sodium/hydrogen exchanger 1
Authors:Prestel, A, Kragelund, B.B, Pedersen, E.S, Pedersen, S.F, Sjoegaard-Frich, L.M.
Deposit date:2020-06-08
Release date:2021-03-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Dynamic Na + /H + exchanger 1 (NHE1) - calmodulin complexes of varying stoichiometry and structure regulate Ca 2+ -dependent NHE1 activation.
Elife, 10, 2021
7W9K
DownloadVisualize
BU of 7w9k by Molmil
Cryo-EM structure of human Nav1.7-beta1-beta2 complex at 2.2 angstrom resolution
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, (3beta,14beta,17beta,25R)-3-[4-methoxy-3-(methoxymethyl)butoxy]spirost-5-en, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Yan, N, Huang, G, Liu, D, Wei, P, Shen, H.
Deposit date:2021-12-09
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:High-resolution structures of human Na v 1.7 reveal gating modulation through alpha-pi helical transition of S6 IV.
Cell Rep, 39, 2022
7XVF
DownloadVisualize
BU of 7xvf by Molmil
Nav1.7 mutant class2
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Huang, G, Wu, Q, Li, Z, Pan, X, Yan, N.
Deposit date:2022-05-22
Release date:2022-08-10
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Unwinding and spiral sliding of S4 and domain rotation of VSD during the electromechanical coupling in Na v 1.7.
Proc.Natl.Acad.Sci.USA, 119, 2022
7XVE
DownloadVisualize
BU of 7xve by Molmil
Human Nav1.7 mutant class-I
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Huang, G, Wu, Q, Li, Z, Pan, X, Yan, N.
Deposit date:2022-05-21
Release date:2022-08-10
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Unwinding and spiral sliding of S4 and domain rotation of VSD during the electromechanical coupling in Na v 1.7.
Proc.Natl.Acad.Sci.USA, 119, 2022
4OFM
DownloadVisualize
BU of 4ofm by Molmil
Triclinic NaGST1
Descriptor: GLUTATHIONE, Glutathione S-transferase-1
Authors:Asojo, O.A.
Deposit date:2014-01-15
Release date:2014-12-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structure of glutathione S-transferase 1 from the major human hookworm parasite Necator americanus (Na-GST-1) in complex with glutathione.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4OFT
DownloadVisualize
BU of 4oft by Molmil
C- Orthorombic NaGST1
Descriptor: Glutathione S-transferase-1
Authors:Asojo, O.A.
Deposit date:2014-01-15
Release date:2014-12-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of glutathione S-transferase 1 from the major human hookworm parasite Necator americanus (Na-GST-1) in complex with glutathione.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4OFN
DownloadVisualize
BU of 4ofn by Molmil
Monoclinic NaGST1
Descriptor: GLUTATHIONE, Glutathione S-transferase-1
Authors:Asojo, O.A.
Deposit date:2014-01-15
Release date:2014-12-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structure of glutathione S-transferase 1 from the major human hookworm parasite Necator americanus (Na-GST-1) in complex with glutathione.
Acta Crystallogr F Struct Biol Commun, 70, 2014
4M8J
DownloadVisualize
BU of 4m8j by Molmil
Crystal structure of CaiT R262E bound to gamma-butyrobetaine
Descriptor: 3-CARBOXY-N,N,N-TRIMETHYLPROPAN-1-AMINIUM, L-carnitine/gamma-butyrobetaine antiporter
Authors:Kalayil, S.
Deposit date:2013-08-13
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.294 Å)
Cite:Arginine oscillation explains Na+ independence in the substrate/product antiporter CaiT.
Proc.Natl.Acad.Sci.USA, 110, 2013
7DTC
DownloadVisualize
BU of 7dtc by Molmil
voltage-gated sodium channel Nav1.5-E1784K
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Sodium channel protein type 5 subunit alpha
Authors:Yan, N, Pan, X, Li, Z.
Deposit date:2021-01-04
Release date:2021-03-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of human Na v 1.5 reveals the fast inactivation-related segments as a mutational hotspot for the long QT syndrome.
Proc.Natl.Acad.Sci.USA, 118, 2021
8K1T
DownloadVisualize
BU of 8k1t by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of MgCl2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Structural basis and synergism of ATP and Na+ activation in bacterial K+ uptake system KtrAB
Nat Commun, 15, 2024
8K1U
DownloadVisualize
BU of 8k1u by Molmil
Potassium transporter KtrAB from Bacillus subtilis in ATP-bound state with addition of EDTA and EGTA
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, Ktr system potassium uptake protein B, ...
Authors:Chang, Y.K, Chiang, W.T, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Structural basis and synergism of ATP and Na+ activation in bacterial K+ uptake system KtrAB
Nat Commun, 15, 2024
8K1K
DownloadVisualize
BU of 8k1k by Molmil
KtrA bound with ATP and sodium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Ktr system potassium uptake protein A, SODIUM ION
Authors:Chiang, W.T, Chang, Y.K, Hu, N.J, Tsai, M.D.
Deposit date:2023-07-11
Release date:2024-04-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis and synergism of ATP and Na+ activation in bacterial K+ uptake system KtrAB
Nat Commun, 15, 2024

219869

건을2024-05-15부터공개중

PDB statisticsPDBj update infoContact PDBjnumon