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8GK2
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BU of 8gk2 by Molmil
Porous framework formed by assembly of a bipyridyl-conjugated helical peptide
分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, LEU-AIB-ALA-SER-LEU-ALA-CYS-AIB-LEU, NICOTINIC ACID, ...
著者Hess, S.S, Nguyen, A.I.
登録日2023-03-16
公開日2023-11-15
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Noncovalent Peptide Assembly Enables Crystalline, Permutable, and Reactive Thiol Frameworks.
J.Am.Chem.Soc., 145, 2023
4U9H
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BU of 4u9h by Molmil
Ultra High Resolution Structure Of The Ni-R State Of [Nife]Hydrogenase From Desulufovibrio Vulgaris Miyazaki F
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE3-S4 CLUSTER, ...
著者Ogata, H, Nishikawa, K, Lubitz, W.
登録日2014-08-06
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Hydrogens detected by subatomic resolution protein crystallography in a [NiFe] hydrogenase.
Nature, 520, 2015
1JXX
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CRAMBIN MIXED SEQUENCE FORM AT 200 K. PROTEIN/WATER SUBSTATES
分子名称: Crambin, ETHANOL
著者Teeter, M.M, Yamano, A, Stec, B, Mohanty, U.
登録日2001-09-10
公開日2001-10-31
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献On the nature of a glassy state of matter in a hydrated protein: Relation to protein function.
Proc.Natl.Acad.Sci.USA, 98, 2001
8PB5
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PsiM in complex with sinefungin and norbaeocystin
分子名称: CHLORIDE ION, Norbaeocystin, Psilocybin synthase, ...
著者Werten, S, Hudspeth, J, Rupp, B.
登録日2023-06-08
公開日2024-04-03
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Methyl transfer in psilocybin biosynthesis.
Nat Commun, 15, 2024
1JXY
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BU of 1jxy by Molmil
CRAMBIN MIXED SEQUENCE FORM AT 220 K. PROTEIN/WATER SUBSTATES
分子名称: Crambin, ETHANOL
著者Teeter, M.M, Yamano, A, Stec, B, Mohanty, U.
登録日2001-09-10
公開日2001-10-31
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献On the nature of a glassy state of matter in a hydrated protein: Relation to protein function.
Proc.Natl.Acad.Sci.USA, 98, 2001
6KFN
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BU of 6kfn by Molmil
Crystal structure of alginate lyase from Paenibacillus sp. str. FPU-7
分子名称: IMIDAZOLE, SODIUM ION, alginate lyase
著者Itoh, T, Nakagawa, E, Yoda, M, Nakaichi, A, Hibi, T, Kimoto, H.
登録日2019-07-08
公開日2019-10-30
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Structural and biochemical characterisation of a novel alginate lyase from Paenibacillus sp. str. FPU-7.
Sci Rep, 9, 2019
3UI6
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BU of 3ui6 by Molmil
0.89 A resolution crystal structure of human Parvulin 14 in complex with oxidized DTT
分子名称: (4S,5S)-1,2-DITHIANE-4,5-DIOL, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4, SODIUM ION, ...
著者Mueller, J.W, Link, N.M, Matena, A, Hoppstock, L, Rueppel, A, Bayer, P, Blankenfeldt, W.
登録日2011-11-04
公開日2012-11-07
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献0.89 A resolution crystal structure of human Parvulin 14 in complex with oxidized DTT
To be Published
4OY5
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0.89 Angstrom resolution crystal structure of (Gly-Pro-Hyp)10
分子名称: Collagen
著者Suzuki, H, Mahapatra, D, Steel, P.J, Dyer, J, Dobson, R.C.J, Gerrard, J.A, Valery, C.
登録日2014-02-10
公開日2015-03-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Sub-angstrom structure of the collagen model peptide (GPO)10 shows a hydrated triple helix with pitch variation and two proline ring conformations
To Be Published
4O6U
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0.89A resolution structure of the hemophore HasA from Pseudomonas aeruginosa (H83A mutant)
分子名称: 1,2-ETHANEDIOL, HasAp, PROTOPORPHYRIN IX CONTAINING FE
著者Lovell, S, Kumar, R, Battaile, K.P, Matsumura, H, Yao, H, Rodriguez, J.C, Moenne-Loccoz, P, Rivera, M.
登録日2013-12-23
公開日2014-03-26
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献Replacing the Axial Ligand Tyrosine 75 or Its Hydrogen Bond Partner Histidine 83 Minimally Affects Hemin Acquisition by the Hemophore HasAp from Pseudomonas aeruginosa.
Biochemistry, 53, 2014
2QDV
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BU of 2qdv by Molmil
Structure of the Cu(II) form of the M51A mutant of amicyanin
分子名称: Amicyanin, COPPER (II) ION, PHOSPHATE ION
著者Carrell, C.J, Ma, J.K, Wang, Y, Davidson, V.L, Mathews, F.S.
登録日2007-06-21
公開日2007-12-11
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献A single methionine residue dictates the kinetic mechanism of interprotein electron transfer from methylamine dehydrogenase to amicyanin.
Biochemistry, 46, 2007
1SK5
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BU of 1sk5 by Molmil
The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
分子名称: 5'-D(*CP*TP*TP*TP*TP*AP*AP*AP*AP*G)-3', CALCIUM ION
著者Han, G.W, Langs, D, Kopka, M.L, Dickerson, R.E.
登録日2004-03-04
公開日2005-06-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (0.89 Å)
主引用文献The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
To be Published
4WEE
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BU of 4wee by Molmil
High-resolution structure of Synaptotagmin 1 C2A
分子名称: SODIUM ION, SULFATE ION, Synaptotagmin-1
著者Sutton, R.B, Fuson, K.L.
登録日2014-09-09
公開日2014-10-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (0.891 Å)
主引用文献High-resolution structure of Synaptotagmin 1 C2A
To Be Published
7LTD
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BU of 7ltd by Molmil
X-ray radiation damage series on Proteinase K at 100K, crystal structure, dataset 1
分子名称: CALCIUM ION, NITRATE ION, Proteinase K
著者Yabukarski, F, Doukov, T, Herschlag, D.
登録日2021-02-19
公開日2022-08-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Evaluating the impact of X-ray damage on conformational heterogeneity in room-temperature (277 K) and cryo-cooled protein crystals.
Acta Crystallogr D Struct Biol, 78, 2022
5AVH
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BU of 5avh by Molmil
The 0.90 angstrom structure (I222) of glucose isomerase crystallized in high-strength agarose hydrogel
分子名称: Xylose isomerase
著者Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
登録日2015-06-16
公開日2015-07-08
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
5GJI
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BU of 5gji by Molmil
PI3K p85 N-terminal SH2 domain/CD28-derived peptide complex
分子名称: GLYCEROL, Phosphatidylinositol 3-kinase regulatory subunit alpha, SULFATE ION, ...
著者Inaba, S, Numoto, N, Morii, H, Ogawa, S, Ikura, T, Abe, R, Ito, N, Oda, M.
登録日2016-06-30
公開日2016-12-14
最終更新日2017-05-10
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Crystal Structures and Thermodynamic Analysis Reveal Distinct Mechanisms of CD28 Phosphopeptide Binding to the Src Homology 2 (SH2) Domains of Three Adaptor Proteins
J. Biol. Chem., 292, 2017
5X9L
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BU of 5x9l by Molmil
Recombinant thaumatin I at 0.9 Angstrom
分子名称: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin I
著者Masuda, T, Okubo, K, Sugahara, M, Suzuki, M, Mikami, B.
登録日2017-03-08
公開日2018-03-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Subatomic structure of hyper-sweet thaumatin D21N mutant reveals the importance of flexible conformations for enhanced sweetness.
Biochimie, 157, 2019
3ZTM
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BU of 3ztm by Molmil
Cytochrome c prime from alcaligenes xylosoxidans: as isolated L16G variant at 0.9 A resolution: unrestraint refinement
分子名称: CARBON MONOXIDE, CYTOCHROME C', HEME C
著者Antonyuk, S.V, Rustage, N, Eady, R.R, Hasnain, S.S.
登録日2011-07-11
公開日2011-10-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
3G21
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BU of 3g21 by Molmil
Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein: Low pH
分子名称: Gag polyprotein, NITRATE ION
著者Kingston, R.L.
登録日2009-01-30
公開日2009-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly
Structure, 17, 2009
8ANM
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BU of 8anm by Molmil
Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from water
分子名称: Peptide LYIQWL from Tc5b
著者Durvanger, Z.
登録日2022-08-05
公開日2023-08-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation.
Nat Commun, 14, 2023
7OUZ
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BU of 7ouz by Molmil
Human OMPD-domain of UMPS in complex with 6-hydroxy-UMP at 0.9 Angstroms resolution, crystal 1
分子名称: 6-HYDROXYURIDINE-5'-PHOSPHATE, GLYCEROL, PROLINE, ...
著者Rindfleisch, S, Tittmann, K.
登録日2021-06-14
公開日2022-04-20
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Ground-state destabilization by electrostatic repulsion is not a driving force in orotidine-5-monophosphate decarboxylase catalysis
Nat Catal, 5, 2022
5B28
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BU of 5b28 by Molmil
The 0.90A structure of human FABP3 F16V mutant complexed with palmitic acid
分子名称: Fatty acid-binding protein, heart, PALMITIC ACID, ...
著者Matsuoka, D, Sugiyama, S, Kakinouchi, K, Niiyama, M, Murata, M, Matsuoka, S.
登録日2016-01-12
公開日2017-01-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献The 0.90A structure of human FABP3 F16V mutant complexed with palmitic acid.
To Be Published
7PGZ
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BU of 7pgz by Molmil
Structure of dark-adapted AsLOV2 Q513L
分子名称: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Gelfert, R, Weyand, M, Moeglich, A.
登録日2021-08-16
公開日2022-05-11
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine.
Nat Commun, 13, 2022
6UMZ
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Crystal structure of photoactive yellow protein (PYP); 3-Br-p-coumaric acid chromophore
分子名称: (2E)-3-(3-bromo-4-hydroxyphenyl)prop-2-enoic acid, Photoactive yellow protein
著者Lin, C.-Y, Romei, M.G, Boxer, S.G.
登録日2019-10-10
公開日2020-07-15
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
1N9B
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BU of 1n9b by Molmil
Ultrahigh resolution structure of a class A beta-lactamase: On the mechanism and specificity of the extended-spectrum SHV-2 enzyme
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BETA-LACTAMASE SHV-2, ...
著者Nukaga, M, Mayama, K, Hujer, A.M, Bonomo, R.A, Knox, J.R.
登録日2002-11-22
公開日2003-04-08
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Ultrahigh resolution structure of a class A beta-lactamase: On the mechanism and specificity of the extended-spectrum SHV-2 enzyme
J.Mol.Biol., 328, 2003
1BYZ
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DESIGNED PEPTIDE ALPHA-1, P1 FORM
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
著者Prive, G.G, Anderson, D.H, Wesson, L, Cascio, D, Eisenberg, D.
登録日1998-10-20
公開日1998-10-28
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (0.9 Å)
主引用文献Packed protein bilayers in the 0.90 A resolution structure of a designed alpha helical bundle.
Protein Sci., 8, 1999

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