Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8OH0
DownloadVisualize
BU of 8oh0 by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D08
Descriptor: 1-(2-ethylsulfonylethyl)-1,3,3-trimethyl-urea, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OGZ
DownloadVisualize
BU of 8ogz by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D06
Descriptor: (3-methoxyphenyl)-pyrrol-1-yl-methanone, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OGM
DownloadVisualize
BU of 8ogm by Molmil
Crystal structure of CdaA from Bacillus subtilis
Descriptor: Cyclic di-AMP synthase CdaA
Authors:Garbers, T.B, Neumann, P, Weiss, M.S, Wollenhaupt, J, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OGO
DownloadVisualize
BU of 8ogo by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry A12
Descriptor: 3-(propan-2-yl)-1,2,4-oxadiazol-5(4H)-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OGS
DownloadVisualize
BU of 8ogs by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry B08
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ethyl 1,3-dihydro-2H-pyrrolo[3,4-c]pyridine-2-carboxylate
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OGY
DownloadVisualize
BU of 8ogy by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry D04
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, methyl 4-fluoro-L-phenylalaninate
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-20
Release date:2024-03-27
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHJ
DownloadVisualize
BU of 8ohj by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry G08
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-ethyl-2-{[5-(propan-2-yl)-1,3,4-oxadiazol-2-yl]sulfanyl}acetamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHL
DownloadVisualize
BU of 8ohl by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H09
Descriptor: (2~{R})-2-fluoranyl-2-(4-fluoranyl-1,2,4$l^{4}-triazacyclopenta-2,4-dien-1-yl)-1-phenyl-ethanone, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHF
DownloadVisualize
BU of 8ohf by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F04
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-[(4-bromo-3-methylphenyl)methyl]-2-(methylsulfonyl)ethan-1-amine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHK
DownloadVisualize
BU of 8ohk by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H01
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ~{N},~{N}-diethyl-2-(4-nitrophenoxy)ethanamine
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHO
DownloadVisualize
BU of 8oho by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry H11
Descriptor: 1-cyclopentyl-3-[[(2~{S})-oxolan-2-yl]methyl]urea, Cyclic di-AMP synthase CdaA, MAGNESIUM ION, ...
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHH
DownloadVisualize
BU of 8ohh by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry G05
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-phenyl-N'-propan-2-ylurea
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHB
DownloadVisualize
BU of 8ohb by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E08
Descriptor: 5-(2-methoxyethyl)-1,3,4-oxadiazol-2-amine, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.11 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHC
DownloadVisualize
BU of 8ohc by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry E12
Descriptor: 6-azanyl-3-methyl-1,3-benzoxazol-2-one, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHG
DownloadVisualize
BU of 8ohg by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F09
Descriptor: 4-pyridin-2-ylphenol, Cyclic di-AMP synthase CdaA, MAGNESIUM ION
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
8OHE
DownloadVisualize
BU of 8ohe by Molmil
PanDDA analysis group deposition -- CdaA in complex with fragment F2X-Entry F03
Descriptor: Cyclic di-AMP synthase CdaA, MAGNESIUM ION, N-(3-fluorophenyl)-2-(2-methoxyethoxy)acetamide
Authors:Garbers, T.B, Neumann, P, Wollenhaupt, J, Weiss, M.S, Ficner, R.
Deposit date:2023-03-21
Release date:2024-04-03
Last modified:2025-05-14
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystallographic fragment screen of the c-di-AMP-synthesizing enzyme CdaA from Bacillus subtilis.
Acta Crystallogr.,Sect.F, 80, 2024
1MD9
DownloadVisualize
BU of 1md9 by Molmil
CRYSTAL STRUCTURE OF DhbE IN COMPLEX WITH DHB AND AMP
Descriptor: 2,3-DIHYDROXY-BENZOIC ACID, 2,3-dihydroxybenzoate-AMP ligase, ADENOSINE MONOPHOSPHATE
Authors:May, J.J, Kessler, N, Marahiel, M.A, Stubbs, M.T.
Deposit date:2002-08-07
Release date:2002-09-11
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of DhbE, an archetype for aryl acid activating domains of modular nonribosomal peptide synthetases.
Proc.Natl.Acad.Sci.USA, 99, 2002
2OOY
DownloadVisualize
BU of 2ooy by Molmil
Crystal structure of the adenylate sensor from AMP-activated protein kinase complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CITRATE ANION, Hypothetical protein C1556.08c in chromosome I, ...
Authors:Townley, R, Shapiro, L.
Deposit date:2007-01-26
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystal structures of the adenylate sensor from fission yeast AMP-activated protein kinase.
Science, 315, 2007
4M9D
DownloadVisualize
BU of 4m9d by Molmil
The Crystal structure of an adenylosuccinate synthetase from Bacillus anthracis str. Ames Ancestor in complex with AMP.
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, Adenylosuccinate synthetase, ...
Authors:Tan, K, Zhou, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2013-08-14
Release date:2013-08-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.821 Å)
Cite:The Crystal structure of an adenylosuccinate synthetase from Bacillus anthracis str. Ames Ancestor in complex with AMP.
To be Published
6PJW
DownloadVisualize
BU of 6pjw by Molmil
Adenylate kinase from Methanococcus igneus - AMP bound form
Descriptor: ADENOSINE MONOPHOSPHATE, Adenylate kinase, MAGNESIUM ION
Authors:Moon, S, Kim, J, Olmos, J.L, Bae, E, Phillips Jr, G.N.
Deposit date:2019-06-28
Release date:2020-01-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Adenylate kinase from Methanococcus igneus - AMP bound form
To Be Published
2QRD
DownloadVisualize
BU of 2qrd by Molmil
Crystal Structure of the Adenylate Sensor from AMP-activated Protein Kinase in complex with ADP and ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Protein C1556.08c, ...
Authors:Jin, X, Townley, R, Shapiro, L.
Deposit date:2007-07-28
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Structural Insight into AMPK Regulation: ADP Comes into Play.
Structure, 15, 2007
2QRE
DownloadVisualize
BU of 2qre by Molmil
Crystal structure of the adenylate sensor from AMP-activated protein kinase in complex with 5-aminoimidazole-4-carboxamide 1-beta-D-ribofuranotide (ZMP)
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, Protein C1556.08c, SNF1-like protein kinase ssp2, ...
Authors:Jin, X, Townley, R, Shapiro, L.
Deposit date:2007-07-28
Release date:2007-10-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structural Insight into AMPK Regulation: ADP Comes into Play.
Structure, 15, 2007
2QR1
DownloadVisualize
BU of 2qr1 by Molmil
Crystal structure of the adenylate sensor from AMP-activated protein kinase in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein C1556.08c, SNF1-like protein kinase ssp2, ...
Authors:Jin, X, Townley, R, Shapiro, L.
Deposit date:2007-07-27
Release date:2007-10-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Insight into AMPK Regulation: ADP Comes into Play.
Structure, 15, 2007
2UZT
DownloadVisualize
BU of 2uzt by Molmil
PKA structures of AKT, indazole-pyridine inhibitors
Descriptor: (2S)-1-{[5-(3-METHYL-1H-INDAZOL-5-YL)PYRIDIN-3-YL]OXY}-3-PHENYLPROPAN-2-AMINE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, CAMP-DEPENDENT PROTEIN KINASE, ...
Authors:Zhu, G.D, Gandhi, V.B, Gong, J, Thomas, S, Woods, K.W, Song, X, Li, T, Diebold, R.B, Luo, Y, Liu, X, Guan, R, Klinghofer, V, Johnson, E.F, Bouska, J, Olson, A, Marsh, K.C, Stoll, V.S, Mamo, M, Polakowski, J, Campbell, T.J, Penning, T.D, Li, Q, Rosenberg, S.H, Giranda, V.L.
Deposit date:2007-05-01
Release date:2007-06-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Syntheses of Potent, Selective, and Orally Bioavailable Indazole-Pyridine Series of Protein Kinase B/Akt Inhibitors with Reduced Hypotension.
J.Med.Chem., 50, 2007
2UZU
DownloadVisualize
BU of 2uzu by Molmil
PKA structures of indazole-pyridine series of AKT inhibitors
Descriptor: (2S)-1-(1H-INDOL-3-YL)-3-{[5-(3-METHYL-1H-INDAZOL-5-YL)PYRIDIN-3-YL]OXY}PROPAN-2-AMINE, CAMP-DEPENDENT PROTEIN KINASE INHIBITOR ALPHA, CAMP-DEPENDENT PROTEIN KINASE, ...
Authors:Zhu, G.D, Gandhi, V.B, Gong, J, Thomas, S, Woods, K.W, Song, X, Li, T, Diebold, R.B, Luo, Y, Liu, X, Guan, R, Klinghofer, V, Johnson, E.F, Bouska, J, Olson, A, Marsh, K.C, Stoll, V.S, Mamo, M, Polakowski, J, Campbell, T.J, Penning, T.D, Li, Q, Rosenberg, S.H, Giranda, V.L.
Deposit date:2007-05-01
Release date:2007-06-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Syntheses of Potent, Selective, and Orally Bioavailable Indazole-Pyridine Series of Protein Kinase B/Akt Inhibitors with Reduced Hypotension.
J.Med.Chem., 50, 2007

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon