Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4TX3
DownloadVisualize
BU of 4tx3 by Molmil
Complex of the X-domain and OxyB from Teicoplanin Biosynthesis
Descriptor: 1,2-ETHANEDIOL, OxyB protein, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Peschke, M, Haslinger, K, Cryle, M.J.
Deposit date:2014-07-02
Release date:2015-02-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-domain of peptide synthetases recruits oxygenases crucial for glycopeptide biosynthesis.
Nature, 521, 2015
4TVU
DownloadVisualize
BU of 4tvu by Molmil
Crystal structure of trehalose synthase from Deinococcus radiodurans reveals a closed conformation for catalysis of the intramolecular isomerization
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MAGNESIUM ION, ...
Authors:Wang, Y.L, Chow, S.Y, Lin, Y.T, Liaw, S.H.
Deposit date:2014-06-28
Release date:2014-12-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of trehalose synthase from Deinococcus radiodurans reveal that a closed conformation is involved in catalysis of the intramolecular isomerization.
Acta Crystallogr.,Sect.D, 70, 2014
2G0F
DownloadVisualize
BU of 2g0f by Molmil
Crystal Structure of P144A mutant of E.coli CcmG protein
Descriptor: Thiol:disulfide interchange protein dsbE
Authors:Ouyang, N, Gao, Y.G, Hu, H.Y, Xia, Z.X.
Deposit date:2006-02-12
Release date:2006-12-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of E. coli CcmG and its mutants reveal key roles of the N-terminal beta-sheet and the fingerprint region
Proteins, 65, 2006
3CXI
DownloadVisualize
BU of 3cxi by Molmil
Structure of BthTX-I complexed with alpha-tocopherol
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, Myotoxic phospholipase A2-like, SULFATE ION, ...
Authors:dos Santos, J.I, Fontes, M.R.M.
Deposit date:2008-04-24
Release date:2009-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Comparative structural studies on Lys49-phospholipases A(2) from Bothrops genus reveal their myotoxic site.
J.Struct.Biol., 167, 2009
3QGZ
DownloadVisualize
BU of 3qgz by Molmil
Re-investigated high resolution crystal structure of histidine triad nucleotide-binding protein 1 (HINT1) from rabbit complexed with adenosine
Descriptor: ADENOSINE, Histidine triad nucleotide-binding protein 1
Authors:Dolot, R.M, Ozga, M, Krakowiak, A, Nawrot, B, Stec, W.J.
Deposit date:2011-01-25
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:High-resolution X-ray crystal structure of rabbit histidine triad nucleotide-binding protein 1 (rHINT1) - adenosine complex at 1.10A resolution
Acta Crystallogr.,Sect.D, 67, 2011
2D31
DownloadVisualize
BU of 2d31 by Molmil
Crystal structure of disulfide-linked HLA-G dimer
Descriptor: 9-mer peptide from Histone H2A, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
Authors:Shiroishi, M, Kuroki, K, Ose, T, Rasubala, L, Shiratori, I, Arase, H, Tsumoto, K, Kumagai, I, Kohda, D, Maenaka, K.
Deposit date:2005-09-23
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Efficient Leukocyte Ig-like Receptor Signaling and Crystal Structure of Disulfide-linked HLA-G Dimer
J.Biol.Chem., 281, 2006
2D2K
DownloadVisualize
BU of 2d2k by Molmil
Crystal Structure of a minimal, native (U39) all-RNA hairpin ribozyme
Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*GP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ...
Authors:Alam, S, Grum-Tokars, V, Krucinska, J, Kundracik, M.L, Wedekind, J.E.
Deposit date:2005-09-11
Release date:2005-11-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Conformational heterogeneity at position U37 of an all-RNA hairpin ribozyme with implications for metal binding and the catalytic structure of the S-turn
Biochemistry, 44, 2005
2D2L
DownloadVisualize
BU of 2d2l by Molmil
Crystal Structure of a minimal, all-RNA hairpin ribozyme with a propyl linker (C3) at position U39
Descriptor: 5'-R(*CP*GP*GP*UP*GP*AP*GP*AP*AP*GP*GP*G)-3', 5'-R(*GP*GP*CP*AP*GP*AP*GP*AP*AP*AP*CP*AP*CP*AP*CP*GP*A)-3', 5'-R(*UP*CP*CP*CP*(A2M)P*GP*UP*CP*CP*AP*CP*CP*G)-3', ...
Authors:Alam, S, Grum-Tokars, V, Krucinska, J, Kundracik, M.L, Wedekind, J.E.
Deposit date:2005-09-11
Release date:2005-11-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Conformational heterogeneity at position U37 of an all-RNA hairpin ribozyme with implications for metal binding and the catalytic structure of the S-turn
Biochemistry, 44, 2005
3TQ0
DownloadVisualize
BU of 3tq0 by Molmil
Crystal structure of Leishmania major dihydroorotate dehydrogenase in complex with fumarate
Descriptor: Dihydroorotate dehydrogenase, FLAVIN MONONUCLEOTIDE, FUMARIC ACID, ...
Authors:Cordeiro, A.T, Feliciano, P.R, Nonato, M.C.
Deposit date:2011-09-08
Release date:2012-05-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of dihydroorotate dehydrogenase from Leishmania major.
Biochimie, 94, 2012
2JUL
DownloadVisualize
BU of 2jul by Molmil
NMR Structure of DREAM
Descriptor: CALCIUM ION, Calsenilin
Authors:Ames, J.
Deposit date:2007-08-30
Release date:2008-04-22
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR structure of DREAM: Implications for Ca(2+)-dependent DNA binding and protein dimerization.
Biochemistry, 47, 2008
3UCM
DownloadVisualize
BU of 3ucm by Molmil
Coccomyxa beta-carbonic anhydrase in complex with thiocyanate
Descriptor: Carbonic anhydrase, THIOCYANATE ION, ZINC ION
Authors:Huang, S, Hainzl, T, Sauer-Eriksson, A.E.
Deposit date:2011-10-27
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.513 Å)
Cite:Structural studies of [beta]-carbonic anhydrase from the green alga Coccomyxa: inhibitor complexes with anions and acetazolamide.
Plos One, 6, 2011
2JU0
DownloadVisualize
BU of 2ju0 by Molmil
Structure of Yeast Frequenin bound to PdtIns 4-kinase
Descriptor: CALCIUM ION, Calcium-binding protein NCS-1, Phosphatidylinositol 4-kinase PIK1
Authors:Ames, J.
Deposit date:2007-08-11
Release date:2007-08-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insights into activation of phosphatidylinositol 4-kinase (Pik1) by yeast frequenin (Frq1).
J.Biol.Chem., 282, 2007
2GA9
DownloadVisualize
BU of 2ga9 by Molmil
Crystal Structure of the Heterodimeric Vaccinia Virus Polyadenylate Polymerase with Bound ATP-gamma-S
Descriptor: CALCIUM ION, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Moure, C.M, Bowman, B.R, Gershon, P.D, Quiocho, F.A.
Deposit date:2006-03-08
Release date:2006-05-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of the vaccinia virus polyadenylate polymerase heterodimer: insights into ATP selectivity and processivity.
Mol.Cell, 22, 2006
2FU3
DownloadVisualize
BU of 2fu3 by Molmil
Crystal structure of gephyrin E-domain
Descriptor: gephyrin
Authors:Kim, E.Y, Schindelin, H.
Deposit date:2006-01-25
Release date:2006-03-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Deciphering the structural framework of glycine receptor anchoring by gephyrin.
Embo J., 25, 2006
2GAF
DownloadVisualize
BU of 2gaf by Molmil
Crystal Structure of the Vaccinia Polyadenylate Polymerase Heterodimer (apo form)
Descriptor: Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase, Poly(A) polymerase catalytic subunit
Authors:Moure, C.M, Bowman, B.R, Gershon, P.D, Quiocho, F.A.
Deposit date:2006-03-08
Release date:2006-05-16
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of the vaccinia virus polyadenylate polymerase heterodimer: insights into ATP selectivity and processivity.
Mol.Cell, 22, 2006
2GB2
DownloadVisualize
BU of 2gb2 by Molmil
The P52G mutant of amicyanin in the Cu(II) state.
Descriptor: Amicyanin, COPPER (II) ION
Authors:Ma, J.K, Carrell, C.J, Mathews, F.S, Davidson, V.L.
Deposit date:2006-03-09
Release date:2006-08-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Site-Directed Mutagenesis of Proline 52 To Glycine in Amicyanin Converts a True Electron Transfer Reaction into One that Is Conformationally Gated.
Biochemistry, 45, 2006
2LAE
DownloadVisualize
BU of 2lae by Molmil
NMR solution structure of the C-terminal domain of the E. coli lipoprotein BamC
Descriptor: Lipoprotein 34
Authors:Pardi, A, Warner, L.
Deposit date:2011-03-11
Release date:2011-06-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the BamC Two-Domain Protein Obtained by Rosetta with a Limited NMR Data Set.
J.Mol.Biol., 411, 2011
2L23
DownloadVisualize
BU of 2l23 by Molmil
NMR structure of the ACID (ACtivator Interacting Domain) of the human mediator Med25 protein
Descriptor: Mediator of RNA polymerase II transcription subunit 25
Authors:Bontems, F, Monte, D, Dewitte, F, Villeret, V.
Deposit date:2010-08-10
Release date:2010-11-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of the human Mediator MED25 ACID domain.
J.Struct.Biol., 174, 2011
2L65
DownloadVisualize
BU of 2l65 by Molmil
HADDOCK calculated model of the complex of the resistance protein CalC and Calicheamicin-Gamma
Descriptor: 2,4-dideoxy-4-(ethylamino)-3-O-methyl-alpha-L-threo-pentopyranose-(1-2)-4-amino-4,6-dideoxy-beta-D-glucopyranose, 2,6-dideoxy-4-thio-beta-D-allopyranose, 3-O-methyl-alpha-L-rhamnopyranose, ...
Authors:Singh, S, Markley, J.L, Thorson, J.S, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2010-11-15
Release date:2011-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006
2LAF
DownloadVisualize
BU of 2laf by Molmil
NMR solution structure of the N-terminal domain of the E. coli lipoprotein BamC
Descriptor: Lipoprotein 34
Authors:Pardi, A, Warner, L.
Deposit date:2011-03-11
Release date:2011-06-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the BamC Two-Domain Protein Obtained by Rosetta with a Limited NMR Data Set.
J.Mol.Biol., 411, 2011
4V67
DownloadVisualize
BU of 4v67 by Molmil
Crystal structure of a translation termination complex formed with release factor RF2.
Descriptor: 16S RRNA, 23S RRNA, 30S ribosomal protein S10, ...
Authors:Korostelev, A, Asahara, H, Lancaster, L, Laurberg, M, Hirschi, A, Noller, H.F.
Deposit date:2008-10-27
Release date:2014-07-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a translation termination complex formed with release factor RF2.
Proc.Natl.Acad.Sci.USA, 105, 2008
8F56
DownloadVisualize
BU of 8f56 by Molmil
Dimer of aminoglycoside efflux pump AcrD treated with gentamicin
Descriptor: Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-11
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023
1QZN
DownloadVisualize
BU of 1qzn by Molmil
Crystal Structure Analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus
Descriptor: cellulosomal scaffoldin adaptor protein B
Authors:Frolow, F, Noach, I, Rosenheck, S, Lamed, R, Qi, X, Shimon, L.J.W, Bayer, E.A.
Deposit date:2003-09-17
Release date:2004-09-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a type-II cohesin module from the Bacteroides cellulosolvens cellulosome reveals novel and distinctive secondary structural elements.
J.Mol.Biol., 348, 2005
2AWE
DownloadVisualize
BU of 2awe by Molmil
Base-Tetrad Swapping Results in Dimerization of RNA Quadruplexes: Implications for Formation of I-Motif RNA Octaplex
Descriptor: 5'-R(*UP*(BGM)P*GP*UP*GP*U)-3', POTASSIUM ION, STRONTIUM ION
Authors:Pan, B, Shi, K, Sundaralingam, M.
Deposit date:2005-08-31
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Base-tetrad swapping results in dimerization of RNA quadruplexes: implications for formation of the i-motif RNA octaplex.
Proc.Natl.Acad.Sci.Usa, 103, 2006
8F4N
DownloadVisualize
BU of 8f4n by Molmil
Dimer of aminoglycoside efflux pump AcrD
Descriptor: Efflux pump membrane transporter
Authors:Zhang, Z.
Deposit date:2022-11-11
Release date:2022-12-28
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Cryo-EM Structures of AcrD Illuminate a Mechanism for Capturing Aminoglycosides from Its Central Cavity.
Mbio, 14, 2023

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon