PDB: 674 件ウェブページステータス検索Chemie searchBIRD

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6ZVX	X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165H-P174L LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE 分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K. 登録日 2020-07-27 公開日 2021-08-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165H-P174L LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE To Be Published
6ZVW	X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165H LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... 著者 Tarnawski, M, Frei, M, Hiblot, J, Johnsson, K. 登録日 2020-07-27 公開日 2021-08-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 X-RAY STRUCTURE OF THE HALOALKANE DEHALOGENASE HALOTAG7-Q165H LABELED WITH A CHLOROALKANE-TETRAMETHYLRHODAMINE FLUOROPHORE SUBSTRATE To Be Published
7CLZ	Crystal structure of Alp1U W187F/Y247F in complex with fluostatin C 分子名称: BORIC ACID, D-MALATE, Fluostatin C, ... 著者 Zhang, L, De, B.C. 登録日 2020-07-22 公開日 2020-10-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.10001016 Å) 主引用文献 Mutation of an atypical oxirane oxyanion hole improves regioselectivity of the alpha / beta-fold epoxide hydrolase Alp1U. J.Biol.Chem., 295, 2020
7CG2	Vigna radiata Epoxide hydrolase mutant 分子名称: Epoxide hydrolase 著者 Li, F.L, Yu, H.L, Xu, J.H. 登録日 2020-06-30 公開日 2021-07-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.001 Å) 主引用文献 Reprogramming Epoxide Hydrolase to Improve Enantioconvergence in Hydrolysis of Styrene Oxide Scaffolds Adv.Synth.Catal., 362, 2021
7CG6	Vigna radiata Epoxide hydrolase mutant M263Q 分子名称: Epoxide hydrolase 著者 Li, F.L, Yu, H.L, Xu, J.H. 登録日 2020-06-30 公開日 2021-07-07 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Reprogramming Epoxide Hydrolase to Improve Enantioconvergence in Hydrolysis of Styrene Oxide Scaffolds Adv.Synth.Catal., 362, 2021
6ZCC	X-ray structure of the Haloalkane dehalogenase HOB (HaloTag7-based Oligonucleotide Binder) labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate 分子名称: ACETATE ION, CALCIUM ION, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2020-06-10 公開日 2021-04-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
7C4D	Marine microorganism esterase 分子名称: 1,2-ETHANEDIOL, ACETATE ION, Putative esterase, ... 著者 Zhu, C.H, Wu, Y.K, Isupov, M.N. 登録日 2020-05-16 公開日 2021-05-26 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Structural Insights into a Novel Esterase from the East Pacific Rise and Its Improved Thermostability by a Semirational Design. J.Agric.Food Chem., 69, 2021
6YNY	Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1Fo composite dimer model 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Kock Flygaard, R, Muhleip, A, Amunts, A. 登録日 2020-04-14 公開日 2020-09-30 最終更新日 2020-11-11 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization. Nat Commun, 11, 2020
6YNX	Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - Fo-subcomplex 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Kock Flygaard, R, Muhleip, A, Amunts, A. 登録日 2020-04-14 公開日 2020-09-30 最終更新日 2020-11-11 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization. Nat Commun, 11, 2020
6YNZ	Cryo-EM structure of Tetrahymena thermophila mitochondrial ATP synthase - F1Fo composite tetramer model 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, ADENOSINE-5'-DIPHOSPHATE, ... 著者 Kock Flygaard, R, Muhleip, A, Amunts, A. 登録日 2020-04-14 公開日 2020-09-30 最終更新日 2020-11-11 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Type III ATP synthase is a symmetry-deviated dimer that induces membrane curvature through tetramerization. Nat Commun, 11, 2020
6YN2	Crystal structure of Renilla reniformis luciferase variant RLuc8-W121F/E144Q in complex with a coelenteramide (the postcatalytic enzyme-product complex) 分子名称: ACETATE ION, Coelenterazine h 2-monooxygenase, GLYCEROL, ... 著者 Damborsky, J, Marek, M. 登録日 2020-04-10 公開日 2021-04-21 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Engineering the protein dynamics of an ancestral luciferase. Nat Commun, 12, 2021
6YL4	Soluble epoxide hydrolase in complex with 3-((R)-3-(1-hydroxyureido)but-1-yn-1-yl)-N-((S)-3-phenyl-3-(4-trifluoromethoxy)phenyl)propyl)benzamide 分子名称: 3-[(3~{R})-3-[aminocarbonyl(oxidanyl)amino]but-1-ynyl]-~{N}-[(3~{S})-3-phenyl-3-[4-(trifluoromethyloxy)phenyl]propyl]benzamide, Bifunctional epoxide hydrolase 2 著者 Kramer, J.S, Pogoryelov, D, Hiesinger, K, Proschak, E. 登録日 2020-04-06 公開日 2020-10-21 最終更新日 2021-02-24 実験手法 X-RAY DIFFRACTION (2.001 Å) 主引用文献 Design, Synthesis, and Structure-Activity Relationship Studies of Dual Inhibitors of Soluble Epoxide Hydrolase and 5-Lipoxygenase. J.Med.Chem., 63, 2020
6Y7B	X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-carbopyronine fluorophore substrate 分子名称: 4-[2-[2-(6-chloranylhexoxy)ethoxy]ethylcarbamoyl]-2-[3-(dimethylamino)-6-(dimethyl-$l^{4}-azanylidene)-10,10-dimethyl-anthracen-9-yl]benzoic acid, CHLORIDE ION, Haloalkane dehalogenase 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2020-02-28 公開日 2021-03-31 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
6Y7A	X-ray structure of the Haloalkane dehalogenase HaloTag7 labeled with a chloroalkane-tetramethylrhodamine fluorophore substrate 分子名称: CHLORIDE ION, GLYCEROL, Haloalkane dehalogenase, ... 著者 Tarnawski, M, Johnsson, K, Hiblot, J. 登録日 2020-02-28 公開日 2021-03-31 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Kinetic and Structural Characterization of the Self-Labeling Protein Tags HaloTag7, SNAP-tag, and CLIP-tag. Biochemistry, 60, 2021
6XY9	Crystal structure of haloalkane dehalogenase DbeA-M1 loop variant from Bradyrhizobium elkanii 分子名称: ACETATE ION, CHLORIDE ION, Haloalkane dehalogenase 著者 Prudnikova, T, Rezacova, P, Kuta Smatanova, I, Chaloupkova, R, Damborsky, J. 登録日 2020-01-29 公開日 2020-07-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family. Comput Struct Biotechnol J, 18, 2020
6XTC	Crystal structure of haloalkane dehalogenase variant DhaA177 domain-swapped dimer type-3 分子名称: GLYCEROL, Haloalkane dehalogenase variant DhaA177 domain-swapped dimer type-3, SULFATE ION 著者 Markova, K, Damborsky, J, Marek, M. 登録日 2020-01-16 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.543 Å) 主引用文献 Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers Acs Catalysis, 11, 2021
6TY7	Crystal structure of haloalkane dehalogenase variant DhaA115 domain-swapped dimer type-1 分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ... 著者 Markova, K, Chaloupkova, R, Damborsky, J, Marek, M. 登録日 2020-01-15 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers Acs Catalysis, 11, 2021
6XT8	Crystal structure of haloalkane dehalogenase variant DhaA115 domain-swapped dimer type-2 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ... 著者 Markova, K, Damborsky, J, Marek, M. 登録日 2020-01-15 公開日 2021-01-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers Acs Catalysis, 11, 2021
6V7N	Crystal Structure of a human Lysosome Resident Glycoprotein, Lysosomal Acid Lipase, and its Implications in Cholesteryl Ester Storage Disease (CESD) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Lysosomal acid lipase/cholesteryl ester hydrolase, ... 著者 Han, S. 登録日 2019-12-09 公開日 2020-06-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.62 Å) 主引用文献 Crystal structure of human lysosomal acid lipase and its implications in cholesteryl ester storage disease. J.Lipid Res., 61, 2020
6L7M	Characterization and structural analysis of a thermostable zearalenone-degrading enzyme 分子名称: AB hydrolase-1 domain-containing protein 著者 Wei, X.H, Meng, G. 登録日 2019-11-01 公開日 2020-11-04 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Characterization and structural analysis of a thermostable zearalenone-degrading enzyme To Be published
6T6X	Structure of the Bottromycin epimerase BotH in complex with substrate 分子名称: (4~{R})-2-[(1~{R})-1-[[(2~{S})-2-[[(2~{S})-3-methyl-2-[[(4~{Z},6~{S},9~{S},12~{S})-2,8,11-tris(oxidanylidene)-6,9-di(propan-2-yl)-1,4,7,10-tetrazabicyclo[10.3.0]pentadec-4-en-5-yl]amino]butanoyl]amino]-3-phenyl-propanoyl]amino]-3-oxidanyl-3-oxidanylidene-propyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid, BotH 著者 Koehnke, J, Sikandar, A. 登録日 2019-10-20 公開日 2020-07-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes. Nat.Chem.Biol., 16, 2020
6T6Z	Structure of the Bottromycin epimerase BotH in complex with a bottromycin A2 derivative 分子名称: BotH, Bottromycin A2 derivative 著者 Koehnke, J, Sikandar, A. 登録日 2019-10-20 公開日 2020-07-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes. Nat.Chem.Biol., 16, 2020
6T6Y	Structure of the Bottromycin epimerase BotH in complex with Bottromycin A2 分子名称: BotH, Bottromycin A2 著者 Koehnke, J, Sikandar, A. 登録日 2019-10-20 公開日 2020-07-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes. Nat.Chem.Biol., 16, 2020
6T70	Structure of the Bottromycin epimerase BotH in complex with Bottromycin A2 derivative 分子名称: BotH, Bottromycin A2 derivative, CHLORIDE ION, ... 著者 Koehnke, J, Sikandar, A. 登録日 2019-10-20 公開日 2020-07-15 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes. Nat.Chem.Biol., 16, 2020
6T6H	Apo structure of the Bottromycin epimerase BotH 分子名称: BotH, SODIUM ION, SULFATE ION 著者 Koehnke, J, Sikandar, A. 登録日 2019-10-18 公開日 2020-07-15 最終更新日 2020-08-26 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 The bottromycin epimerase BotH defines a group of atypical alpha / beta-hydrolase-fold enzymes. Nat.Chem.Biol., 16, 2020

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