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4UY0
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BU of 4uy0 by Molmil
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Atherton, J, Farabella, I, Yu, I.M, Rosenfeld, S.S, Houdusse, A, Topf, M, Moores, C.
Deposit date:2014-08-27
Release date:2014-09-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Conserved Mechanisms of Microtubule-Stimulated Adp Release, ATP Binding, and Force Generation in Transport Kinesins.
Elife, 3, 2014
5DJX
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BU of 5djx by Molmil
Fc Heterodimer Design 2.9 L368M/K370E + E357A/S364G
Descriptor: Fc-III peptide, Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Demarest, S.J, Kuhlman, B.
Deposit date:2015-09-02
Release date:2016-03-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Computationally Designed Bispecific Antibodies using Negative State Repertoires.
Structure, 24, 2016
4UXO
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BU of 4uxo by Molmil
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, KINESIN-3 MOTOR DOMAIN, ...
Authors:Atherton, J, Farabella, I, Yu, I.M, Rosenfeld, S.S, Houdusse, A, Topf, M, Moores, C.
Deposit date:2014-08-27
Release date:2014-09-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Conserved Mechanisms of Microtubule-Stimulated Adp Release, ATP Binding, and Force Generation in Transport Kinesins.
Elife, 3, 2014
5DVK
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BU of 5dvk by Molmil
Fc Design 7.7 B chain homodimer T366V/K409I
Descriptor: Ig gamma-1 chain C region
Authors:Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Demarest, S.J, Kuhlman, B.
Deposit date:2015-09-21
Release date:2016-03-30
Last modified:2016-04-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Computationally Designed Bispecific Antibodies using Negative State Repertoires.
Structure, 24, 2016
6DHY
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BU of 6dhy by Molmil
Crystallogrpahic tetramer of Zn-bound RIDC1 variant bearing two disulfide bonded cysteines
Descriptor: CALCIUM ION, HEME C, Soluble cytochrome b562, ...
Authors:Tezcan, F.A, Churchfield, L.A.
Deposit date:2018-05-21
Release date:2018-07-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Determining the Structural and Energetic Basis of Allostery in a De Novo Designed Metalloprotein Assembly.
J. Am. Chem. Soc., 140, 2018
6DHZ
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BU of 6dhz by Molmil
Crystallographic octamer of a metal-free RIDC1 variant bearing two disulfide bonded cysteines
Descriptor: CALCIUM ION, HEME C, Soluble cytochrome b562
Authors:Tezcan, F.A, Churchfield, L.A.
Deposit date:2018-05-21
Release date:2018-07-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Determining the Structural and Energetic Basis of Allostery in a De Novo Designed Metalloprotein Assembly.
J. Am. Chem. Soc., 140, 2018
5DVM
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BU of 5dvm by Molmil
Fc Design 20.8.37 B chain homodimer E357D/S364R/Y407A
Descriptor: Fc-III peptide, Ig gamma-1 chain C region
Authors:Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Demarest, S.J, Kuhlman, B.
Deposit date:2015-09-21
Release date:2016-03-30
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Computationally Designed Bispecific Antibodies using Negative State Repertoires.
Structure, 24, 2016
4UXP
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BU of 4uxp by Molmil
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, KINESIN-3 MOTOR DOMAIN, ...
Authors:Atherton, J, Farabella, I, Yu, I.M, Rosenfeld, S.S, Houdusse, A, Topf, M, Moores, C.
Deposit date:2014-08-27
Release date:2014-09-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.3 Å)
Cite:Conserved Mechanisms of Microtubule-Stimulated Adp Release, ATP Binding, and Force Generation in Transport Kinesins.
Elife, 3, 2014
4UXY
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BU of 4uxy by Molmil
Conserved mechanisms of microtubule-stimulated ADP release, ATP binding, and force generation in transport kinesins
Descriptor: ALPHA TUBULIN, BETA TUBULIN, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Atherton, J, Farabella, I, Yu, I.M, Rosenfeld, S.S, Houdusse, A, Topf, M, Moores, C.
Deposit date:2014-08-27
Release date:2014-09-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Conserved Mechanisms of Microtubule-Stimulated Adp Release, ATP Binding, and Force Generation in Transport Kinesins.
Elife, 3, 2014
1BH5
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BU of 1bh5 by Molmil
HUMAN GLYOXALASE I Q33E, E172Q DOUBLE MUTANT
Descriptor: LACTOYLGLUTATHIONE LYASE, S-HEXYLGLUTATHIONE, ZINC ION
Authors:Cameron, A.D, Jones, T.A.
Deposit date:1998-06-13
Release date:1998-11-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Involvement of an active-site Zn2+ ligand in the catalytic mechanism of human glyoxalase I.
J.Biol.Chem., 273, 1998
1BYZ
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BU of 1byz by Molmil
DESIGNED PEPTIDE ALPHA-1, P1 FORM
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
Authors:Prive, G.G, Anderson, D.H, Wesson, L, Cascio, D, Eisenberg, D.
Deposit date:1998-10-20
Release date:1998-10-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Packed protein bilayers in the 0.90 A resolution structure of a designed alpha helical bundle.
Protein Sci., 8, 1999
1PG5
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BU of 1pg5 by Molmil
CRYSTAL STRUCTURE OF THE UNLIGATED (T-STATE) ASPARTATE TRANSCARBAMOYLASE FROM THE EXTREMELY THERMOPHILIC ARCHAEON SULFOLOBUS ACIDOCALDARIUS
Descriptor: Aspartate carbamoyltransferase, Aspartate carbamoyltransferase regulatory chain, ZINC ION
Authors:De Vos, D, Van Petegem, F, Remaut, H, Legrain, C, Glansdorff, N, Van Beeumen, J.J.
Deposit date:2003-05-27
Release date:2004-06-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of T State Aspartate Carbamoyltransferase of the Hyperthermophilic Archaeon Sulfolobus acidocaldarius.
J.Mol.Biol., 339, 2004
8PTP
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BU of 8ptp by Molmil
Structure of Rho pentamer in complex with Rof
Descriptor: Protein rof, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTN
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BU of 8ptn by Molmil
Structure of the transcription termination factor Rho in complex with Rof
Descriptor: Protein rof, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTG
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BU of 8ptg by Molmil
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTM
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BU of 8ptm by Molmil
Structure of the transcription termination factor Rho in complex with Rof and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein rof, ...
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
1B4F
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BU of 1b4f by Molmil
OLIGOMERIC STRUCTURE OF THE HUMAN EPHB2 RECEPTOR SAM DOMAIN
Descriptor: EPHB2
Authors:Thanos, C.D, Goodwill, K.E, Bowie, J.U.
Deposit date:1998-12-20
Release date:1999-02-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Oligomeric structure of the human EphB2 receptor SAM domain.
Science, 283, 1999
8PTO
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BU of 8pto by Molmil
Structure of Rho pentamer in complex with Rof and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein rof, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
5DVL
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BU of 5dvl by Molmil
Fc Design 20.8.37 A chain homodimer Y349S/T366M/K370Y/K409V
Descriptor: Fc-III peptide, Ig gamma-1 chain C region
Authors:Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Demarest, S.J, Kuhlman, B.
Deposit date:2015-09-21
Release date:2016-03-30
Last modified:2016-07-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Computationally Designed Bispecific Antibodies using Negative State Repertoires.
Structure, 24, 2016
8QAM
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BU of 8qam by Molmil
vaccinia virus Uracil DNA glycosidase mutant I197K-V200E-L204K
Descriptor: GLYCEROL, SULFATE ION, Uracil-DNA glycosylase
Authors:Tarbouriech, N, Burmeister, W.P.
Deposit date:2023-08-23
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus.
Plos Pathog., 20, 2024
8Q3R
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BU of 8q3r by Molmil
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
Descriptor: DNA polymerase, DNA polymerase processivity factor component OPG148, Uracil-DNA glycosylase
Authors:Burmeister, W.P, Ballandras-Colas, A, Boettcher, B, Grimm, C.
Deposit date:2023-08-04
Release date:2024-05-08
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus.
Plos Pathog., 20, 2024
5DJY
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BU of 5djy by Molmil
Fc Heterodimer Design 20.8 Y349S/T366V/K370Y/K409V + E357D/S364Q/Y407A
Descriptor: Fc-III peptide, Ig gamma-1 chain C region, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Atwell, S, Leaver-Fay, A, Froning, K.J, Aldaz, H, Pustilnik, A, Lu, F, Huang, F, Yuan, R, Dhanani, S.H, Chamberlain, A.K, Fitchett, J.R, Gutierrez, B, Hendle, J, Demarest, S.J, Kuhlman, B.
Deposit date:2015-09-02
Release date:2016-03-30
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Computationally Designed Bispecific Antibodies using Negative State Repertoires.
Structure, 24, 2016
1CDC
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BU of 1cdc by Molmil
CD2, N-TERMINAL DOMAIN (1-99), TRUNCATED FORM
Descriptor: CD2
Authors:Murray, A.J, Barclay, A.N, Brady, R.L.
Deposit date:1995-05-23
Release date:1995-09-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:One sequence, two folds: a metastable structure of CD2.
Proc.Natl.Acad.Sci.USA, 92, 1995
2CAX
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BU of 2cax by Molmil
STRUCTURAL BASIS FOR COOPERATIVE BINDING OF RIBBON-HELIX-HELIX REPRESSOR OMEGA TO MUTATED DIRECT DNA HEPTAD REPEATS
Descriptor: 5'-D(*CP*TP*TP*GP*TP*GP*AP*CP*TP*TP *GP*TP*GP*AP*TP*TP*CP*G)-3', 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*AP *TP*CP*AP*CP*AP*AP*G)-3', 5'-D(*GP*AP*AP*TP*CP*AP*CP*AP*AP*GP *TP*CP*AP*CP*AP*AP*GP*C)-3', ...
Authors:Weihofen, W.A, Cicek, A, Pratto, F, Alonso, J.C, Saenger, W.
Deposit date:2005-12-23
Release date:2006-03-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structures of Omega Repressors Bound to Direct and Inverted DNA Repeats Explain Modulation of Transcription.
Nucleic Acids Res., 34, 2006
5H2F
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BU of 5h2f by Molmil
Crystal structure of the PsbM-deletion mutant of photosystem II
Descriptor: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Uto, S, Kawakami, K, Umena, Y, Iwai, M, Ikeuchi, M, Shen, J.R, Kamiya, N.
Deposit date:2016-10-15
Release date:2017-03-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mutual relationships between structural and functional changes in a PsbM-deletion mutant of photosystem II.
Faraday Discuss., 198, 2017

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