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2I87
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Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: D-alanine-D-alanine ligase, SULFATE ION
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-10-03
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I8C
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BU of 2i8c by Molmil
Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, MAGNESIUM ION, ...
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-09-01
公開日2006-09-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2I80
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Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies
分子名称: 3-CHLORO-2,2-DIMETHYL-N-[4-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE, D-alanine-D-alanine ligase
著者Liu, S, Chang, J.S, Herberg, J.T, Horng, M.-M, Tomich, P.K, Lin, A.H, Marotti, K.R.
登録日2006-08-31
公開日2006-09-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Allosteric inhibition of Staphylococcus aureus D-alanine:D-alanine ligase revealed by crystallographic studies.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3LWB
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BU of 3lwb by Molmil
Crystal Structure of apo D-alanine:D-alanine Ligase (Ddl) from Mycobacterium tuberculosis
分子名称: D-alanine--D-alanine ligase, NITRATE ION
著者Bruning, J.B, Murillo, A.C, Chacon, O, Barletta, R.G, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC)
登録日2010-02-23
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the Mycobacterium tuberculosis D-Alanine:D-Alanine Ligase, a Target of the Antituberculosis Drug D-Cycloserine.
Antimicrob.Agents Chemother., 55, 2011
8EVW
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DdlA from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase A, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVX
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BU of 8evx by Molmil
DdlA from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase A, MAGNESIUM ION, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVV
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Apo form of DdlA from Pseudomonas aeruginosa PAO1
分子名称: D-alanine--D-alanine ligase A
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVY
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DdlB from Pseudomonas aeruginosa PAO1 in complex with ATP and D-ala-D-ala
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase B, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
8EVZ
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DdlB from Pseudomonas aeruginosa PAO1 in complex with ADP and phosphorylated D-cycloserine
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase B, MAGNESIUM ION, ...
著者Pederick, J.L, Woolman, J.C, Bruning, J.B.
登録日2022-10-21
公開日2023-08-30
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Comparative functional and structural analysis of Pseudomonas aeruginosa d-alanine-d-alanine ligase isoforms as prospective antibiotic targets.
Febs J., 290, 2023
3N8D
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BU of 3n8d by Molmil
Crystal structure of Staphylococcus aureus VRSA-9 D-Ala:D-Ala ligase
分子名称: CHLORIDE ION, D-alanine--D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Saul, F.A, Haouz, A, Meziane-Cherif, D.
登録日2010-05-28
公開日2010-10-13
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Molecular basis of vancomycin dependence in VanA-type Staphylococcus aureus VRSA-9.
J.Bacteriol., 192, 2010
4C5A
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BU of 4c5a by Molmil
The X-ray crystal structures of D-alanyl-D-alanine ligase in complex ADP and D-cycloserine phosphate
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE--D-ALANINE LIGASE, GLYCEROL, ...
著者Batson, S, Majce, V, Lloyd, A.J, Rea, D, Fishwick, C.W.G, Simmons, K.J, Fulop, V, Roper, D.I.
登録日2013-09-10
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Inhibition of D-Ala:D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine.
Nat Commun, 8, 2017
4C5B
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The X-ray crystal structure of D-alanyl-D-alanine ligase in complex with ATP and D-ala-D-ala
分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBONATE ION, D-ALANINE, ...
著者Batson, S, Majce, V, Lloyd, A.J, Rea, D, Fishwick, C.W.G, Simmons, K.J, Fulop, V, Roper, D.I.
登録日2013-09-10
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Inhibition of D-Ala:D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine.
Nat Commun, 8, 2017
4C5C
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BU of 4c5c by Molmil
The X-ray crystal structure of D-alanyl-D-alanine ligase in complex with ADP and D-ala-D-ala
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-ALANINE--D-ALANINE LIGASE, ...
著者Batson, S, Majce, V, Lloyd, A.J, Rea, D, Fishwick, C.W.G, Simmons, K.J, Fulop, V, Roper, D.I.
登録日2013-09-10
公開日2015-01-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Inhibition of D-Ala:D-Ala ligase through a phosphorylated form of the antibiotic D-cycloserine.
Nat Commun, 8, 2017
3Q1K
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BU of 3q1k by Molmil
The Crystal Structure of the D-alanyl-alanine Synthetase A from Salmonella enterica Typhimurium Complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-alanine--D-alanine ligase A, FORMIC ACID, ...
著者Zhang, R, Maltseva, N, Papazisi, L, Anderson, W, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2010-12-17
公開日2011-01-12
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献The Crystal Structure of the D-alanyl-alanine Synthetase A from Salmonella enterica Typhimurium Complexed with ADP
To be Published
4EGJ
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BU of 4egj by Molmil
Crystal structure of D-alanine-D-alanine ligase from Burkholderia xenovorans
分子名称: D-alanine--D-alanine ligase
著者SSGCID, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-03-31
公開日2012-07-18
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
4EG0
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BU of 4eg0 by Molmil
Crystal Structure of D-alanine--D-alanine ligase from Burkholderia ambifaria
分子名称: 1,2-ETHANEDIOL, D-alanine--D-alanine ligase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2012-03-30
公開日2012-05-09
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013
3R5X
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BU of 3r5x by Molmil
Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis complexed with ATP
分子名称: 1,2-ETHANEDIOL, ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Kim, Y, Mulligan, R, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-20
公開日2011-04-06
最終更新日2015-07-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis complexed with ATP
To be Published
3R23
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BU of 3r23 by Molmil
Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis
分子名称: 1,2-ETHANEDIOL, D-alanine--D-alanine ligase
著者Kim, Y, Mulligan, R, Hasseman, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2011-03-12
公開日2011-03-30
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of D-alanine--D-Alanine Ligase from Bacillus anthracis
To be Published
5BPF
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BU of 5bpf by Molmil
Crystal structure of ADP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-alanine-D-alanine ligase, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-05-28
公開日2016-03-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5BPH
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BU of 5bph by Molmil
Crystal structure of AMP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE MONOPHOSPHATE, D-alanine--D-alanine ligase, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-05-28
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5C1O
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BU of 5c1o by Molmil
Crystal structure of AMP-PNP complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: D-alanine--D-alanine ligase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
著者Tran, H.T, Kang, L.W, Hong, M.K.
登録日2015-06-15
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5C1P
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BU of 5c1p by Molmil
Crystal structure of ADP and D-alanyl-D-alanine complexed D-alanine-D-alanine ligase(DDL) from Yersinia pestis
分子名称: ACETATE ION, ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, ...
著者Tran, H.T, Kang, L.W, Hong, M.K, Ngo, H.P.T.
登録日2015-06-15
公開日2016-03-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of D-alanine-D-alanine ligase from Yersinia pestis: nucleotide phosphate recognition by the serine loop.
Acta Crystallogr D Struct Biol, 72, 2016
5D8D
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BU of 5d8d by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii
分子名称: D-alanine--D-alanine ligase
著者Huynh, K.H, Hong, M.K, Kang, L.W.
登録日2015-08-17
公開日2016-08-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
5DMX
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BU of 5dmx by Molmil
Crystal structure of D-alanine-D-alanine ligase from Acinetobacter baumannii, space group p212121
分子名称: D-alanine--D-alanine ligase
著者Huynh, K.H, Hong, M.K, Kang, L.W.
登録日2015-09-09
公開日2016-08-17
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献The crystal structure of the D-alanine-D-alanine ligase from Acinetobacter baumannii suggests a flexible conformational change in the central domain before nucleotide binding
J. Microbiol., 53, 2015
2YZN
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BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
分子名称: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-05-06
公開日2007-11-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published

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