PDB: 1099 resultsInfo pagesStatus searchChemie searchBIRD

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3CFF	Photoswitchable red fluorescent protein psRFP, on-state Descriptor: GFP-like photoswitchable fluorescent protein Authors: Kachalova, G.S, Gundel, S, Bartunik, H.D, Wiedenmann, J. Deposit date: 2008-03-03 Release date: 2009-03-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of Anemonia sulcata red fluorescent protein asRFP To be Published
2GX2	Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa Descriptor: MAGNESIUM ION, fluorescent protein Dronpa Authors: Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K. Deposit date: 2006-05-08 Release date: 2007-05-08 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S Biochem.Biophys.Res.Commun., 354, 2007
2OGR	Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution Descriptor: FLUORESCENT PROTEIN FP538 Authors: Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z. Deposit date: 2007-01-08 Release date: 2007-09-25 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom Bioorg.Khim., 33
1JBY	CRYSTAL STRUCTURE ANALYSIS OF A DUAL-WAVELENGTH EMISSION GREEN FLUORESCENT PROTEIN VARIANT AT LOW PH Descriptor: GREEN FLUORESCENT PROTEIN Authors: Hanson, G.T, McAnaney, T.B, Park, E.S, Rendell, M.E.P, Yarbrough, D.K, Chu, S, Xi, L, Boxer, S.G, Montrose, M.H, Remington, S.J. Deposit date: 2001-06-07 Release date: 2003-01-07 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Green Fluorescent Protein Variants as Ratiometric Dual Emission pH Sensors. 1. Structural Characterization and Preliminary Application. Biochemistry, 41, 2002
2O29	Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-BR Complex Descriptor: BROMIDE ION, Green fluorescent protein Authors: Garau, G. Deposit date: 2006-11-29 Release date: 2007-05-15 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP. Biophys.J., 93, 2007
3P28	Structure of a Circular Permutant of Green Fluorescent Protein Descriptor: Green fluorescent protein Authors: Melief, E.H, Kim, H, Kim, T.S, Wachter, R.M, Tonge, P.J. Deposit date: 2010-10-01 Release date: 2011-10-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Construction and Characterization of a Stable Circular Permutant of Green Fluorescent Protein To be Published
2P4M	High pH structure of Rtms5 H146S variant Descriptor: GFP-like non-fluorescent chromoprotein, IODIDE ION Authors: Battad, J.M, Wilmann, P.G, Olsen, S, Byres, E, Smith, S.C, Dove, S.G, Turcic, K.N, Devenish, R.J, Rossjohn, J, Prescott, M. Deposit date: 2007-03-12 Release date: 2007-04-03 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: A structural basis for the pH-dependent increase in fluorescence efficiency of chromoproteins J.Mol.Biol., 368, 2007
2IB5	Structural characterization of a blue chromoprotein and its yellow mutant from the sea anemone cnidopus japonicus Descriptor: Chromo protein, PHOSPHATE ION Authors: Chan, M.C.Y, Bosanac, I, Ikura, M. Deposit date: 2006-09-10 Release date: 2006-10-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural Characterization of a Blue Chromoprotein and Its Yellow Mutant from the Sea Anemone Cnidopus Japonicus J.Biol.Chem., 281, 2006
2IOV	Bright-state structure of the reversibly switchable fluorescent protein Dronpa Descriptor: Fluorescent protein Dronpa Authors: Stiel, A.C, Trowitzsch, S, Weber, G, Andresen, M, Eggeling, C, Hell, S.W, Jakobs, S, Wahl, M.C. Deposit date: 2006-10-11 Release date: 2006-12-05 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.8 Å) Cite: 1.8 A bright-state structure of the reversibly switchable fluorescent protein Dronpa guides the generation of fast switching variants Biochem.J., 402, 2007
2PSJ	Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla Reniformis Descriptor: N-[3-BENZYL-5-(4-HYDROXYPHENYL)PYRAZIN-2-YL]-2-(4-HYDROXYPHENYL)ACETAMIDE, Renilla-luciferin 2-monooxygenase Authors: Loening, A.M, Fenn, T.D, Gambhir, S.S. Deposit date: 2007-05-06 Release date: 2007-06-05 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Crystal Structures of the Luciferase and Green Fluorescent Protein from Renilla reniformis. J.Mol.Biol., 374, 2007
4EES	Crystal structure of iLOV Descriptor: FLAVIN MONONUCLEOTIDE, Phototropin-2 Authors: Hitomi, K, Christie, J.M, Arvai, A.S, Hartfield, K.A, Pratt, A.J, Tainer, J.A, Getzoff, E.D. Deposit date: 2012-03-28 Release date: 2012-05-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.805 Å) Cite: Structural Tuning of the Fluorescent Protein iLOV for Improved Photostability. J.Biol.Chem., 287, 2012
8DTA	Metal sensitive GFP (mseGFP) complexed with phenylarsine oxide. Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ... Authors: Rosenbaum, J.C, Carlson, A.E. Deposit date: 2022-07-25 Release date: 2023-07-05 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Glutathione modulates metal binding to proteins. TBD
8A83	rsEGFP2 with a chlorinated chromophore in the fluorescent ON-state in a crystal dehydrated after illumination Descriptor: Green fluorescent protein, SULFATE ION Authors: Fadini, A, van Thor, J, Chang, J. Deposit date: 2022-06-21 Release date: 2023-07-19 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Serial Femtosecond Crystallography Reveals that Photoactivation in a Fluorescent Protein Proceeds via the Hula Twist Mechanism. J.Am.Chem.Soc., 145, 2023
7LG4	Green fluorescent protein from Aequorea macrodactyla - amacGFP Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Bozhanova, N.G, Meiler, J. Deposit date: 2021-01-19 Release date: 2021-01-27 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Heterogeneity of the GFP fitness landscape and data-driven protein design. Elife, 11, 2022
6M9X	X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10A Descriptor: Fluorescent protein lanFP10A Authors: Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S. Deposit date: 2018-08-24 Release date: 2019-03-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.81 Å) Cite: Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue. J. Mol. Biol., 431, 2019
7Z01	Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex Descriptor: 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ... Authors: Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M. Deposit date: 2022-02-21 Release date: 2022-03-30 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.82 Å) Cite: In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M. J.Am.Chem.Soc., 144, 2022
2C9I	Structure of the fluorescent protein asFP499 from Anemonia sulcata Descriptor: GREEN FLUORESCENT PROTEIN ASFP499 Authors: Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U. Deposit date: 2005-12-12 Release date: 2007-01-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein Asfp499 Biophys.J., 91, 2006
6QQ9	Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 5.8 MGy Descriptor: CARBON DIOXIDE, Green fluorescent protein Authors: Gotthard, G, Aumonier, S, Royant, A. Deposit date: 2019-02-18 Release date: 2019-06-19 Last modified: 2019-07-31 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Specific radiation damage is a lesser concern at room temperature. Iucrj, 6, 2019
2H9W	Green fluorescent protein ground states: the influence of a second protonation site near the chromophore Descriptor: Green fluorescent protein, SULFATE ION Authors: Garau, G. Deposit date: 2006-06-12 Release date: 2007-04-24 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore. Biochemistry, 46, 2007
4ZF4	Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(Cl1Y), H148D; circular permutant (50-51) Descriptor: Green fluorescent protein Authors: Oltrogge, L.M, Boxer, S.G. Deposit date: 2015-04-21 Release date: 2015-06-10 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.823 Å) Cite: Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP). Acs Cent.Sci., 1, 2015
8SFV	High affinity nanobodies to GFP Descriptor: GLYCEROL, Green fluorescent protein, LaG19, ... Authors: Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C. Deposit date: 2023-04-11 Release date: 2024-05-22 Method: X-RAY DIFFRACTION (1.83 Å) Cite: High affinity nanobodies to GFP To Be Published
8I4K	Structure of Azami Red1.0, a red fluorescent protein engineered from Azami Green Descriptor: Azami Red1.0, CALCIUM ION Authors: Otsubo, S, Takekawa, N, Imamura, H, Imada, K. Deposit date: 2023-01-19 Release date: 2023-11-01 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Red fluorescent proteins engineered from green fluorescent proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
2AG5	Crystal Structure of Human DHRS6 Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, dehydrogenase/reductase (SDR family) member 6 Authors: Kunde, G, Lukacik, P, Papagrigoriou, E, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC) Deposit date: 2005-07-26 Release date: 2005-08-09 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.84 Å) Cite: Characterization of human DHRS6, an orphan short chain dehydrogenase/reductase enzyme: a novel, cytosolic type 2 R-beta-hydroxybutyrate dehydrogenase J.Biol.Chem., 281, 2006
3EK7	Calcium-saturated GCaMP2 dimer Descriptor: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ... Authors: Akerboom, J, Velez Rivera, J.D, Looger, L.L, Schreiter, E.R. Deposit date: 2008-09-18 Release date: 2008-12-16 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design J.Biol.Chem., 284, 2009
8U24	A Highly Stable Variant of Corynactis Californica Green Fluorescent Protein, ccGFP 9 Descriptor: Green Fluorescent Protein Variant #9, ccGFP 9 Authors: Hung, L.-W, Terwilliger, T.C, Waldo, G, Nguyen, H.B. Deposit date: 2023-09-05 Release date: 2024-01-31 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Engineering highly stable variants of Corynactis californica green fluorescent proteins. Protein Sci., 33, 2024

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