Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6RT0
DownloadVisualize
BU of 6rt0 by Molmil
cryo-em structure of alpha-synuclein fibril polymorph 2A
Descriptor: Alpha-synuclein
Authors:Guerrero-Ferreira, R, Taylor, N.M.I, Arteni, A.A, Melki, R, Meier, B.H, Bockmann, A, Bousset, L, Stahlberg, H.
Deposit date:2019-05-22
Release date:2019-06-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy.
Elife, 8, 2019
6GB8
DownloadVisualize
BU of 6gb8 by Molmil
Copper nitrite reductase from Achromobacter cycloclastes: small cell polymorph dataset 1
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION
Authors:Ebrahim, A, Appleby, M.V, Axford, D, Beale, J, Moreno-Chicano, T, Sherrell, D.A, Strange, R.W, Owen, R.L, Hough, M.A.
Deposit date:2018-04-13
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography.
Acta Crystallogr D Struct Biol, 75, 2019
6GBB
DownloadVisualize
BU of 6gbb by Molmil
Copper nitrite reductase from Achromobacter cycloclastes: large cell polymorph dataset 1
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase, NITRITE ION
Authors:Ebrahim, A, Appleby, M.V, Axford, D, Beale, J, Moreno-Chicano, T, Sherrell, D.A, Strange, R.W, Owen, R.L, Hough, M.A.
Deposit date:2018-04-13
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography.
Acta Crystallogr D Struct Biol, 75, 2019
6GCG
DownloadVisualize
BU of 6gcg by Molmil
Copper nitrite reductase from Achromobacter cycloclastes: large polymorph dataset 15
Descriptor: COPPER (II) ION, Copper-containing nitrite reductase
Authors:Ebrahim, A, Appleby, M.V, Axford, D, Beale, J, Moreno-Chicano, T, Sherrell, D.A, Strange, R.W, Owen, R.L, Hough, M.A.
Deposit date:2018-04-17
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.80015242 Å)
Cite:Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography.
Acta Crystallogr D Struct Biol, 75, 2019
5MUN
DownloadVisualize
BU of 5mun by Molmil
Structural insight into zymogenic latency of gingipain K from Porphyromonas gingivalis.
Descriptor: AZIDE ION, Lys-gingipain W83
Authors:Pomowski, A, Uson, I, Nowakovska, Z, Veillard, F, Sztukowska, M.N, Guevara, T, Goulas, T, Mizgalska, D, Nowak, M, Potempa, B, Huntington, J.A, Potempa, J, Gomis-Ruth, F.X.
Deposit date:2017-01-13
Release date:2017-02-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights unravel the zymogenic mechanism of the virulence factor gingipain K from Porphyromonas gingivalis, a causative agent of gum disease from the human oral microbiome.
J. Biol. Chem., 292, 2017
7A1H
DownloadVisualize
BU of 7a1h by Molmil
Crystal structure of wild-type CI2
Descriptor: SULFATE ION, Subtilisin-chymotrypsin inhibitor-2A
Authors:Olsen, J.G, Teilum, K, Hamborg, L, Roche, J.V.
Deposit date:2020-08-13
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synergistic stabilization of a double mutant in chymotrypsin inhibitor 2 from a library screen in E. coli.
Commun Biol, 4, 2021
7AON
DownloadVisualize
BU of 7aon by Molmil
Crystal structure of CI2 double mutant L49I,I57V
Descriptor: GLYCEROL, SULFATE ION, Subtilisin-chymotrypsin inhibitor-2A
Authors:Olsen, J.G, Teilum, K, Hamborg, L, Roche, J.V.
Deposit date:2020-10-14
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Synergistic stabilization of a double mutant in chymotrypsin inhibitor 2 from a library screen in E. coli.
Commun Biol, 4, 2021
3OW9
DownloadVisualize
BU of 3ow9 by Molmil
Structure of an amyloid forming peptide KLVFFA from amyloid beta, alternate polymorph II
Descriptor: KLVFFA hexapeptide segment from Amyloid beta
Authors:Landau, M, Eisenberg, D.
Deposit date:2010-09-17
Release date:2011-08-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis for amyloid-{beta} polymorphism.
Proc.Natl.Acad.Sci.USA, 108, 2011
8S0L
DownloadVisualize
BU of 8s0l by Molmil
Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Nanobody A07, ...
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of TMPRSS2 zymogen activation and recognition by the HKU1 seasonal coronavirus.
Cell, 187, 2024
8S0N
DownloadVisualize
BU of 8s0n by Molmil
Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07
Descriptor: Transmembrane protease serine 2, nanobody A07
Authors:Duquerroy, S, Fernandez, I, Rey, F.
Deposit date:2024-02-14
Release date:2024-06-26
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of TMPRSS2 zymogen activation and recognition by the HKU1 seasonal coronavirus.
Cell, 187, 2024
8BXV
DownloadVisualize
BU of 8bxv by Molmil
Crystal structure of Odorant Binding Protein 5 from Anopheles gambiae (AgamOBP5) with Thymol
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 5-METHYL-2-(1-METHYLETHYL)PHENOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Liggri, P.G.V, Tsitsanou, K.E, Zographos, S.E.
Deposit date:2022-12-10
Release date:2023-03-22
Last modified:2023-04-12
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The structure of AgamOBP5 in complex with the natural insect repellents Carvacrol and Thymol: Crystallographic, fluorescence and thermodynamic binding studies.
Int.J.Biol.Macromol., 237, 2023
6FHC
DownloadVisualize
BU of 6fhc by Molmil
Crystal Structure of the Amyloid-like hexametric polymorph of the LFKFFK segment from the S. aureus PSMalpha3
Descriptor: CARBONATE ION, CHLORIDE ION, Psm alpha-3, ...
Authors:Landau, M, Colletier, J.-P.
Deposit date:2018-01-14
Release date:2018-08-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Extreme amyloid polymorphism in Staphylococcus aureus virulent PSM alpha peptides.
Nat Commun, 9, 2018
6FHD
DownloadVisualize
BU of 6fhd by Molmil
Crystal Structure of the Amyloid-like, out-of-register beta-sheets, polymorph of the LFKFFK segment from the S. aureus PSMalpha3
Descriptor: Psm alpha-3, SODIUM ION, SULFATE ION
Authors:Landau, M, Salinas, N.
Deposit date:2018-01-14
Release date:2018-08-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Extreme amyloid polymorphism in Staphylococcus aureus virulent PSM alpha peptides.
Nat Commun, 9, 2018
1P2J
DownloadVisualize
BU of 1p2j by Molmil
Structural consequences of accommodation of four non-cognate amino-acid residues in the S1 pocket of bovine trypsin and chymotrypsin
Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ...
Authors:Helland, R, Czapinska, H, Leiros, I, Olufsen, M, Otlewski, J, Smalaas, A.O.
Deposit date:2003-04-15
Release date:2004-04-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.
J.Mol.Biol., 333, 2003
1P2I
DownloadVisualize
BU of 1p2i by Molmil
Structural consequences of accommodation of four non-cognate amino-acid residues in the S1 pocket of bovine trypsin and chymotrypsin
Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ...
Authors:Helland, R, Czapinska, H, Leiros, I, Olufsen, M, Otlewski, J, Smalaas, A.O.
Deposit date:2003-04-15
Release date:2004-04-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.
J.Mol.Biol., 333, 2003
1P2K
DownloadVisualize
BU of 1p2k by Molmil
Structural consequences of accommodation of four non-cognate amino-acid residues in the S1 pocket of bovine trypsin and chymotrypsin
Descriptor: CALCIUM ION, Pancreatic trypsin inhibitor, SULFATE ION, ...
Authors:Helland, R, Czapinska, H, Leiros, I, Olufsen, M, Otlewski, J, Smalaas, A.O.
Deposit date:2003-04-15
Release date:2004-04-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.
J.Mol.Biol., 333, 2003
4EJF
DownloadVisualize
BU of 4ejf by Molmil
Allosteric peptides that bind to a caspase zymogen and mediate caspase tetramerization
Descriptor: Caspase-6, PHOSPHATE ION, phage-derived peptide 419
Authors:Murray, J.M.
Deposit date:2012-04-06
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6465 Å)
Cite:Allosteric peptides bind a caspase zymogen and mediate caspase tetramerization.
Nat.Chem.Biol., 8, 2012
1JC6
DownloadVisualize
BU of 1jc6 by Molmil
SOLUTION STRUCTURE OF BUNGARUS FACIATUS IX, A KUNITZ-TYPE CHYMOTRYPSIN INHIBITOR
Descriptor: VENOM BASIC PROTEASE INHIBITORS IX AND VIIIB
Authors:Chen, C, Hsu, C.H, Su, N.Y, Chiou, S.H, Wu, S.H.
Deposit date:2001-06-08
Release date:2003-06-17
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:Solution structure of a Kunitz-type chymotrypsin inhibitor isolated from the elapid snake Bungarus fasciatus
J.BIOL.CHEM., 276, 2001
5TJ4
DownloadVisualize
BU of 5tj4 by Molmil
Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Pro306 fused to maltose binding protein
Descriptor: SODIUM ION, Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Chao, L.K, Herzberg, O.
Deposit date:2016-10-03
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Gene polymorphism linked to increased asthma and IBD risk alters gasdermin-B structure, a sulfatide and phosphoinositide binding protein.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6J0H
DownloadVisualize
BU of 6j0h by Molmil
Crystal structure of Actinomycin D- d(TTGGCGAA) complex
Descriptor: Actinomycin D, DNA (5'-D(P*TP*TP*GP*GP*CP*GP*AP*A)-3'), SODIUM ION
Authors:Satange, R.B, Hou, M.H.
Deposit date:2018-12-24
Release date:2019-07-24
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
5LYM
DownloadVisualize
BU of 5lym by Molmil
STUDIES OF MONOCLINIC HEN EGG WHITE LYSOZYME. IV. X-RAY REFINEMENT AT 1.8 ANGSTROM RESOLUTION AND A COMPARISON OF THE VARIABLE REGIONS IN THE POLYMORPHIC FORMS
Descriptor: LYSOZYME, NITRATE ION
Authors:Rao, S.T, Sundaralingam, M.
Deposit date:1995-07-20
Release date:1995-10-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Studies of monoclinic hen egg-white lysozyme. IV. X-ray refinement at 1.8 A resolution and a comparison of the variable regions in the polymorphic forms.
Acta Crystallogr.,Sect.D, 52, 1996
8OJ1
DownloadVisualize
BU of 8oj1 by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
Descriptor: Auxin response factor, CHLORIDE ION, HA7
Authors:Crespo, I, Weijers, D, Boer, D.R.
Deposit date:2023-03-23
Release date:2024-04-03
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with High Affinity DNA
To Be Published
8OJ2
DownloadVisualize
BU of 8oj2 by Molmil
Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Auxin response factor, CHLORIDE ION, ...
Authors:Crespo, I, Weijers, D, Boer, D.R.
Deposit date:2023-03-23
Release date:2024-04-17
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Crystal structure of the DNA binding domain of M. polymorpha Auxin Response Factor 2 (MpARF2) in complex with protomor-like sequence IR7
To Be Published
5CXO
DownloadVisualize
BU of 5cxo by Molmil
Intriguing role of epoxide hydrolase/cyclase-like enzyme SalBIII in pyran ring formation in polyether salinomycin
Descriptor: Epoxide hydrolase, HEXAETHYLENE GLYCOL
Authors:Dias, M.V.B, Luhavaya, H, Williams, S.R, Hong, H, Oliveira, L.G, Leadlay, P.F.
Deposit date:2015-07-29
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Enzymology of Pyran Ring A Formation in Salinomycin Biosynthesis.
Angew.Chem.Int.Ed.Engl., 54, 2015
6J0I
DownloadVisualize
BU of 6j0i by Molmil
Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex
Descriptor: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
Authors:Satange, R.B, Chuang, C.Y, Hou, M.H.
Deposit date:2018-12-24
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon