Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1FTQ
DownloadVisualize
BU of 1ftq by Molmil
STRUCTURES OF GLYCOGEN PHOSPHORYLASE-INHIBITOR COMPLEXES AND THE IMPLICATIONS FOR STRUCTURE-BASED DRUG DESIGN
Descriptor: (5S,7R,8S,9S,10R)-3-amino-8,9,10-trihydroxy-7-(hydroxymethyl)-6-oxa-1,3-diazaspiro[4.5]decane-2,4-dione, GLYCOGEN PHOSPHORYLASE, INOSINIC ACID, ...
Authors:Watson, K.A, Tsitsanou, K.E, Gregoriou, M, Zographos, S.E, Skamnaki, V.T, Oikonomakos, N.G, Fleet, G.W, Johnson, L.N.
Deposit date:2000-09-13
Release date:2000-10-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Kinetic and crystallographic studies of glucopyranose spirohydantoin and glucopyranosylamine analogs inhibitors of glycogen phosphorylase.
Proteins, 61, 2005
1TPL
DownloadVisualize
BU of 1tpl by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF TYROSINE PHENOL-LYASE
Descriptor: SULFATE ION, TYROSINE PHENOL-LYASE
Authors:Antson, A, Demidkina, T, Dauter, Z, Harutyunyan, E, Wilson, K.
Deposit date:1992-11-25
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Three-dimensional structure of tyrosine phenol-lyase.
Biochemistry, 32, 1993
2JAB
DownloadVisualize
BU of 2jab by Molmil
A designed ankyrin repeat protein evolved to picomolar affinity to Her2
Descriptor: H10-2-G3
Authors:Zahnd, C, Wyler, E, Schwenk, J.M, Steiner, D, Lawrence, M.C, McKern, N.M, Pecorari, F, Ward, C.W, Joos, T.O, Pluckthun, A.
Deposit date:2006-11-27
Release date:2007-05-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Designed Ankyrin Repeat Protein Evolved to Picomolar Affinity to Her2
J.Mol.Biol., 369, 2007
1G9D
DownloadVisualize
BU of 1g9d by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM BOTULINUM NEUROTOXIN B COMPLEXED WITH AN INHIBITOR (EXPERIMENT 2)
Descriptor: BIS(5-AMIDINO-BENZIMIDAZOLYL)METHANE, BOTULINUM NEUROTOXIN TYPE B, ZINC ION
Authors:Eswaramoorthy, S, Swaminathan, S.
Deposit date:2000-11-22
Release date:2002-11-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Novel Mechanism for Clostridium botulinum Neurotoxin Inhibition
BIOCHEMISTRY, 41, 2002
1YJH
DownloadVisualize
BU of 1yjh by Molmil
Crystal Structure of Cimex Nitrophorin Ferrous NO Complex
Descriptor: NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE, salivary nitrophorin
Authors:Weichsel, A, Badgandi, H, Montfort, W.R.
Deposit date:2005-01-14
Release date:2005-12-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of Cimex Nitrophorin NO Complex
To be Published
1UT6
DownloadVisualize
BU of 1ut6 by Molmil
Structure of acetylcholinesterase (E.C. 3.1.1.7) complexed with N-9-(1',2',3',4'-Tetrahydroacridinyl)-1,8- diaminooctane at 2.4 angstroms resolution.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINESTERASE, N-9-(1',2',3',4'-TETRAHYDROACRIDINYL)-1,8-DIAMINOOCTANE
Authors:Brumshtein, B, Wong, D.M, Greenblatt, H.M, Carlier, P.R, Pang, Y.-P, Silman, I, Sussman, J.L.
Deposit date:2003-12-04
Release date:2005-04-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Complexes of Alkylene-Linked Tacrine Dimers with Torpedo Californica Acetylcholinesterase: Binding of Bis(5)-Tacrine Produces a Dramatic Rearrangement in the Active-Site Gorge.
J.Med.Chem., 49, 2006
1ULV
DownloadVisualize
BU of 1ulv by Molmil
Crystal Structure of Glucodextranase Complexed with Acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, CALCIUM ION, glucodextranase
Authors:Mizuno, M, Tonozuka, T, Suzuki, S, Uotsu-Tomita, R, Kamitori, S, Nishikawa, A, Sakano, Y.
Deposit date:2003-09-16
Release date:2003-12-09
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural insights into substrate specificity and function of glucodextranase
J.Biol.Chem., 279, 2004
2J8F
DownloadVisualize
BU of 2j8f by Molmil
Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant in complex with a disaccharide- pentapeptide)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-methyl 2-acetamido-3-O-[(1R)-1-carboxyethyl]-2-deoxy-beta-D-glucopyranoside, ALANINE, D-GLUTAMIC ACID, ...
Authors:Perez-Dorado, I, Hermoso, J.A.
Deposit date:2006-10-25
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Elucidation of the Molecular Recognition of Bacterial Cell Wall by Modular Pneumococcal Phage Endolysin Cpl-1.
J.Biol.Chem., 282, 2007
1US2
DownloadVisualize
BU of 1us2 by Molmil
Xylanase10C (mutant E385A) from Cellvibrio japonicus in complex with xylopentaose
Descriptor: ENDO-BETA-1,4-XYLANASE, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Pell, G, Szabo, L, Charnock, S.J, Xie, H, Gloster, T.M, Davies, G.J, Gilbert, H.J.
Deposit date:2003-11-17
Release date:2003-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Biochemical Analysis of Cellvibrio Japonicus Xylanase 10C: How Variation in Substrate-Binding Cleft Influences the Catalytic Profile of Family Gh-10 Xylanases
J.Biol.Chem., 279, 2004
2IX0
DownloadVisualize
BU of 2ix0 by Molmil
RNase II
Descriptor: CALCIUM ION, CYTIDINE-5'-MONOPHOSPHATE, EXORIBONUCLEASE 2, ...
Authors:Frazao, C, Mcvey, C.E, Amblar, M, Barbas, A, Vonrhein, C, Arraiano, C.M, Carrondo, M.A.
Deposit date:2006-07-05
Release date:2006-10-05
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Unravelling the Dynamics of RNA Degradation by Ribonuclease II and its RNA-Bound Complex
Nature, 7, 2006
1VAV
DownloadVisualize
BU of 1vav by Molmil
Crystal structure of alginate lyase PA1167 from Pseudomonas aeruginosa at 2.0 A resolution
Descriptor: Alginate lyase PA1167
Authors:Yamasaki, M, Moriwaki, S, Miyake, O, Hashimoto, W, Murata, K, Mikami, B.
Deposit date:2004-02-19
Release date:2004-05-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and function of a hypothetical Pseudomonas aeruginosa protein PA1167 classified into family PL-7: a novel alginate lyase with a beta-sandwich fold.
J.Biol.Chem., 279, 2004
2IXU
DownloadVisualize
BU of 2ixu by Molmil
Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (wild-type endolysin)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, ALANINE, D-alpha-glutamine, ...
Authors:Perez-Dorado, I, Hermoso, J.A.
Deposit date:2006-07-11
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Elucidation of the Molecular Recognition of Bacterial Cell Wall by Modular Pneumococcal Phage Endolysin Cpl-1.
J.Biol.Chem., 282, 2007
2KH8
DownloadVisualize
BU of 2kh8 by Molmil
Solution Structure of cis-5R,6S-thymine glycol opposite complementary guanine in duplex DNA
Descriptor: 5'-D(*AP*CP*AP*AP*AP*CP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*(CTG)P*GP*TP*TP*TP*GP*T)-3'
Authors:Brown, K.L.
Deposit date:2009-03-24
Release date:2009-12-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA
Biochemistry, 48, 2009
1GNE
DownloadVisualize
BU of 1gne by Molmil
THE THREE-DIMENSIONAL STRUCTURE OF GLUTATHIONE S-TRANSFERASE OF SCHISTOSOMA JAPONICUM FUSED WITH A CONSERVED NEUTRALIZING EPITOPE ON GP41 OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Descriptor: GLUTATHIONE, GLUTATHIONE S-TRANSFERASE
Authors:Lim, K, Ho, J.X, Keeling, K, Gilliland, G.L, Ji, X, Ruker, F, Carter, D.C.
Deposit date:1994-06-16
Release date:1994-11-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of Schistosoma japonicum glutathione S-transferase fused with a six-amino acid conserved neutralizing epitope of gp41 from HIV.
Protein Sci., 3, 1994
1B38
DownloadVisualize
BU of 1b38 by Molmil
HUMAN CYCLIN-DEPENDENT KINASE 2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PROTEIN (CELL DIVISION PROTEIN KINASE 2)
Authors:Brown, N.R, Noble, M.E.M, Lawrie, A.M, Morris, M.C, Tunnah, P, Divita, G, Johnson, L.N, Endicott, J.A.
Deposit date:1998-12-17
Release date:1998-12-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Effects of phosphorylation of threonine 160 on cyclin-dependent kinase 2 structure and activity.
J.Biol.Chem., 274, 1999
1V4L
DownloadVisualize
BU of 1v4l by Molmil
Crystal structure of a platelet agglutination factor isolated from the venom of Taiwan habu (Trimeresurus mucrosquamatus)
Descriptor: mucrocetin alpha chain, mucrocetin beta chain
Authors:Huang, K.-F, Ko, T.-P, Wang, A.H.-J.
Deposit date:2003-11-14
Release date:2003-12-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a platelet-agglutinating factor isolated from the venom of Taiwan habu (Trimeresurus mucrosquamatus).
Biochem.J., 378, 2004
2K96
DownloadVisualize
BU of 2k96 by Molmil
Solution structure of the RDC-refined P2B-P3 pseudoknot from human telomerase RNA (delta U177)
Descriptor: TELOMERASE RNA P2B-P3 PSEUDOKNOT
Authors:Kim, N.-K, Zhang, Q, Zhou, J, Theimer, C.A, Peterson, R.D, Feigon, J.
Deposit date:2008-09-29
Release date:2008-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Wild-type Pseudoknot of Human Telomerase RNA.
J.Mol.Biol., 384, 2008
1ZRV
DownloadVisualize
BU of 1zrv by Molmil
solution structure of spinigerin in H20/TFE 50%
Descriptor: spinigerin
Authors:Landon, C, Meudal, H, Boulanger, N, Bulet, P, Vovelle, F.
Deposit date:2005-05-23
Release date:2005-10-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an alpha-helical conformation.
Biopolymers, 81, 2006
1USG
DownloadVisualize
BU of 1usg by Molmil
L-leucine-binding protein, apo form
Descriptor: LEUCINE-SPECIFIC BINDING PROTEIN
Authors:Magnusson, U, Salopek-Sondi, B, Luck, L.A, Mowbray, S.L.
Deposit date:2003-11-24
Release date:2003-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:X-Ray Structures of the Leucine-Binding Protein Illustrate Conformational Changes and the Basis of Ligand Specificity
J.Biol.Chem., 279, 2004
1SY2
DownloadVisualize
BU of 1sy2 by Molmil
1.0 A Crystal Structure of D129A/L130A Mutant of Nitrophorin 4
Descriptor: AMMONIUM ION, Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Maes, E.M, Weichsel, A, Andersen, J.F, Shepley, D, Montfort, W.R.
Deposit date:2004-03-31
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1 Å)
Cite:Role of binding site loops in controlling nitric oxide release: structure and kinetics of mutant forms of nitrophorin 4
Biochemistry, 43, 2004
1SXW
DownloadVisualize
BU of 1sxw by Molmil
1.05 A Crystal Structure of D30A Mutant of Nitrophorin 4 from Rhodnius Prolixus Complexed with Nitric Oxide
Descriptor: NITRIC OXIDE, Nitrophorin 4, PHOSPHATE ION, ...
Authors:Maes, E.M, Weichsel, A, Andersen, J.F, Shepley, D, Montfort, W.R.
Deposit date:2004-03-31
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Role of binding site loops in controlling nitric oxide release: structure and kinetics of mutant forms of nitrophorin 4
Biochemistry, 43, 2004
2IXV
DownloadVisualize
BU of 2ixv by Molmil
Crystal structure of the modular Cpl-1 endolysin complexed with a peptidoglycan analogue (E94Q mutant)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, ALANINE, D-GLUTAMINE, ...
Authors:Perez-Dorado, I, Hermoso, J.A.
Deposit date:2006-07-11
Release date:2007-07-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Elucidation of the Molecular Recognition of Bacterial Cell Wall by Modular Pneumococcal Phage Endolysin Cpl-1.
J.Biol.Chem., 282, 2007
2IWM
DownloadVisualize
BU of 2iwm by Molmil
precursor mutant Cys1Ser of Penicillin V Acylase from Bacillus sphaericus
Descriptor: PENICILLIN ACYLASE
Authors:Chandra, P.M, Dodson, G, Suresh, C.G.
Deposit date:2006-07-01
Release date:2007-08-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Precursor Mutant Cys1Ser of Penicillin V Acylase from Bacilus Sphaericus
To be Published
1CKP
DownloadVisualize
BU of 1ckp by Molmil
HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR PURVALANOL B
Descriptor: 1,2-ETHANEDIOL, PROTEIN (CYCLIN-DEPENDENT PROTEIN KINASE 2), PURVALANOL B
Authors:Gray, N.S, Thunnissen, A.M.W.H, Schultz, P.G, Kim, S.H.
Deposit date:1998-07-14
Release date:1999-01-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Exploiting chemical libraries, structure, and genomics in the search for kinase inhibitors.
Science, 281, 1998
1H4K
DownloadVisualize
BU of 1h4k by Molmil
Sulfurtransferase from Azotobacter vinelandii in complex with hypophosphite
Descriptor: 1,2-ETHANEDIOL, HYPOPHOSPHITE, SULFATE ION, ...
Authors:Bordo, D, Forlani, F, Spallarossa, A, Colnaghi, R, Carpen, A, Pagani, S, Bolognesi, M.
Deposit date:2001-05-11
Release date:2002-05-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A Persulfurated Cysteine Promotes Active Site Reactivity in Azotobacter Vinelandii Rhodanse
Biol.Chem., 382, 2001

225399

PDB entries from 2024-09-25

PDB statisticsPDBj update infoContact PDBjnumon