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2LQZ
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BU of 2lqz by Molmil
Structure of the RNA claw of the DNA packaging motor of bacteriophage 29
Descriptor: RNA (27-MER)
Authors:Harjes, E.J, Matsuo, H.J, Kitamura, A.J.
Deposit date:2012-03-19
Release date:2012-08-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the RNA claw of the DNA packaging motor of bacteriophage 29.
Nucleic Acids Res., 40, 2012
2N7X
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BU of 2n7x by Molmil
Solution structure of microRNA 20b pre-element
Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*UP*UP*UP*UP*GP*GP*CP*AP*UP*GP*AP*CP*UP*CP*UP*AP*CP*C)-3')
Authors:Yang, F, Chen, Y, Varani, G.
Deposit date:2015-09-25
Release date:2016-04-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer.
Nucleic Acids Res., 44, 2016
3MEY
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BU of 3mey by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Bll0957 protein, MAGNESIUM ION, ...
Authors:Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
3MF1
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BU of 3mf1 by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with an analogue of glycyl adenylate
Descriptor: 5'-O-(glycylsulfamoyl)adenosine, Bll0957 protein, ZINC ION
Authors:Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
1NTG
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BU of 1ntg by Molmil
Crystal Structure of the EMAP II-like Cytokine Released from human tyrosyl-tRNA Synthetase
Descriptor: Tyrosyl-tRNA synthetase
Authors:Yang, X.-L, Skene, R.J, Mcree, D.E, Schimmel, P.
Deposit date:2003-01-29
Release date:2003-05-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Crystal Structure of an EMAP-II-like Cytokine Released from a human tRNA Synthetase
Helv.Chim.Acta, 86, 2003
3MF2
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BU of 3mf2 by Molmil
Crystal structure of class II aaRS homologue (Bll0957) complexed with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Bll0957 protein, GLYCEROL, ...
Authors:Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
Deposit date:2010-04-01
Release date:2010-07-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
2LVY
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BU of 2lvy by Molmil
Solution Structure of a RNA Duplex Containing a 2'-O-Pivaloyloxymethyl Modification
Descriptor: RNA (5'-R(*CP*GP*CP*(UPV)P*AP*CP*GP*CP*T)-3'), RNA (5'-R(*GP*CP*GP*UP*AP*GP*CP*GP*T)-3')
Authors:Baraguey, C.
Deposit date:2012-07-13
Release date:2013-04-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The biolabile 2'-O-pivaloyloxymethyl modification in an RNA helix: an NMR solution structure.
Org.Biomol.Chem., 11, 2013
472D
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BU of 472d by Molmil
STRUCTURE OF AN OCTAMER RNA WITH TANDEM GG/UU MISPAIRS
Descriptor: RNA (5'-R(*GP*UP*AP*GP*GP*CP*AP*C)-3'), RNA (5'-R(*GP*UP*GP*UP*UP*UP*AP*C)-3')
Authors:Deng, J, Sundaralingam, M.
Deposit date:1999-05-14
Release date:2000-11-27
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Synthesis and crystal structure of an octamer RNA r(guguuuac)/r(guaggcac) with G.G/U.U tandem wobble base pairs: comparison with other tandem G.U pairs.
Nucleic Acids Res., 28, 2000
2KP3
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BU of 2kp3 by Molmil
Structure of ANA-RNA hybrid duplex
Descriptor: RNA (5'-R(*(GAO)P*(CAR)P*(UAR)P*(A5O)P*(UAR)P*(A5O)P*(A5O)P*(UAR)P*(GAO)P*(GAO))-3'), RNA (5'-R(*CP*CP*AP*UP*UP*AP*UP*AP*GP*C)-3')
Authors:Gonzalez, C, Martn-Pintado, N, Watts, J, Gomez-Pinto, I, Dhama, M, Orozco, M, Schwartzentruber, J, Portella, G.
Deposit date:2009-10-06
Release date:2010-02-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Differential stability of 2'F-ANA*RNA and ANA*RNA hybrid duplexes: roles of structure, pseudohydrogen bonding, hydration, ion uptake and flexibility.
Nucleic Acids Res., 38, 2010
1DBX
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BU of 1dbx by Molmil
Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)
Descriptor: cysteinyl-tRNA(Pro) deacylase
Authors:Zhang, H, Huang, K, Li, Z, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
8TVZ
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BU of 8tvz by Molmil
RNA origami 3-helix tile Traptamer
Descriptor: RNA (363-MER)
Authors:McRae, E.K.S, Vallina, N.S, Andersen, E.S.
Deposit date:2023-08-18
Release date:2024-04-03
Method:ELECTRON MICROSCOPY (5.94 Å)
Cite:An RNA origami robot that traps and releases a fluorescent aptamer.
Sci Adv, 10, 2024
3G5R
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BU of 3g5r by Molmil
Crystal structure of Thermus thermophilus TrmFO in complex with tetrahydrofolate
Descriptor: (6S)-5,6,7,8-TETRAHYDROFOLATE, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
Deposit date:2009-02-05
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
3G5Q
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BU of 3g5q by Molmil
Crystal structure of Thermus thermophilus TrmFO
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, FLAVIN-ADENINE DINUCLEOTIDE, Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
Authors:Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
Deposit date:2009-02-05
Release date:2009-05-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
3G5S
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BU of 3g5s by Molmil
Crystal structure of Thermus thermophilus TrmFO in complex with glutathione
Descriptor: 1,2-ETHANEDIOL, FLAVIN-ADENINE DINUCLEOTIDE, GLUTATHIONE, ...
Authors:Nishimasu, H, Ishitani, R, Hori, H, Nureki, O.
Deposit date:2009-02-05
Release date:2009-05-19
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Atomic structure of a folate/FAD-dependent tRNA T54 methyltransferase
Proc.Natl.Acad.Sci.USA, 106, 2009
2P8R
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BU of 2p8r by Molmil
Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8 carrying R2303K mutant
Descriptor: Pre-mRNA-splicing factor Prp8
Authors:Zhang, L, Shen, J, Guarnieri, M.T, Heroux, A, Yang, K, Zhao, R.
Deposit date:2007-03-22
Release date:2007-05-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants
Protein Sci., 16, 2007
7KOT
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BU of 7kot by Molmil
Energetic and structural effects of the Tanford transition on the ligand recognition of bovine Beta-lactoglobulin
Descriptor: Beta-lactoglobulin, DODECYL SULFATE
Authors:Rodriguez-Hernandez, A, Rodriguez-Romero, A.
Deposit date:2020-11-09
Release date:2021-01-27
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Energetic and structural effects of the Tanford transition on ligand recognition of bovine beta-lactoglobulin.
Arch.Biochem.Biophys., 699, 2021
2P87
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BU of 2p87 by Molmil
Crystal structure of the C-terminal domain of C. elegans pre-mRNA splicing factor Prp8
Descriptor: Pre-mRNA-splicing factor Prp8
Authors:Zhang, L, Shen, J, Guarnieri, M.T, Heroux, A, Yang, K, Zhao, R.
Deposit date:2007-03-21
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the C-terminal domain of splicing factor Prp8 carrying retinitis pigmentosa mutants
Protein Sci., 16, 2007
1Y2Q
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BU of 1y2q by Molmil
Crystal structure of the editing domain of threonyl-tRNA synthetase from Pyrococcus abyssi
Descriptor: Threonyl-tRNA synthetase
Authors:Dwivedi, S, Kruparani, S.P, Sankaranarayanan, R.
Deposit date:2004-11-23
Release date:2005-06-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A D-amino acid editing module coupled to the translational apparatus in archaea
Nat.Struct.Mol.Biol., 12, 2005
1Q7S
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BU of 1q7s by Molmil
Crystal structure of bit1
Descriptor: bit1
Authors:De Pereda, J.M, Waas, W.F, Jan, Y, Ruoslahti, E, Schimmel, P, Pascual, J.
Deposit date:2003-08-19
Release date:2003-12-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a human peptidyl-tRNA hydrolase reveals a new fold and suggests basis for a bifunctional activity.
J.Biol.Chem., 279, 2004
7KP5
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BU of 7kp5 by Molmil
Energetic and structural effects of the Tanford transition on the ligand recognition of bovine Beta-lactoglobulin
Descriptor: Beta-lactoglobulin, DODECYL SULFATE
Authors:Rodriguez-Hernandez, A, Rodriguez-Romero, A.
Deposit date:2020-11-10
Release date:2021-01-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Energetic and structural effects of the Tanford transition on ligand recognition of bovine beta-lactoglobulin.
Arch.Biochem.Biophys., 699, 2021
7ZDZ
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BU of 7zdz by Molmil
Cryo-EM structure of the human inward-rectifier potassium 2.1 channel (Kir2.1)
Descriptor: Inward rectifier potassium channel 2, POTASSIUM ION, STRONTIUM ION
Authors:Fernandes, C.A.H, Venien-Bryan, C, Fagnen, C, Zuniga, D.
Deposit date:2022-03-30
Release date:2022-09-28
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Cryo-electron microscopy unveils unique structural features of the human Kir2.1 channel.
Sci Adv, 8, 2022
9G40
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BU of 9g40 by Molmil
Structure of the Position 7 CMG-decorated gamma-Tubulin Ring Complex from Pig Brain
Descriptor: CDK5 regulatory subunit-associated protein 2, Gamma-tubulin complex component, Gamma-tubulin complex component 3, ...
Authors:Munoz-Hernandez, H, Krutyholowa, R, Wieczorek, M.
Deposit date:2024-07-12
Release date:2024-10-02
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Partial closure of the gamma-tubulin ring complex by CDK5RAP2 activates microtubule nucleation.
Dev.Cell, 59, 2024
9G3Y
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BU of 9g3y by Molmil
Structure of the Native CMG-decorated gamma-Tubulin Ring Complex from Pig Brain
Descriptor: CDK5 regulatory subunit-associated protein 2, Gamma-tubulin complex component, Gamma-tubulin complex component 3, ...
Authors:Munoz-Hernandez, H, Wieczorek, M.
Deposit date:2024-07-12
Release date:2024-10-02
Last modified:2024-12-18
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Partial closure of the gamma-tubulin ring complex by CDK5RAP2 activates microtubule nucleation.
Dev.Cell, 59, 2024
9G3Z
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BU of 9g3z by Molmil
Structure of the Open gamma-Tubulin Ring Complex from Pig Brain
Descriptor: CDK5 regulatory subunit-associated protein 2, Gamma-tubulin complex component, Gamma-tubulin complex component 3, ...
Authors:Munoz-Hernandez, H, Wieczorek, M.
Deposit date:2024-07-12
Release date:2024-10-02
Last modified:2024-12-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Partial closure of the gamma-tubulin ring complex by CDK5RAP2 activates microtubule nucleation.
Dev.Cell, 59, 2024
9G3X
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BU of 9g3x by Molmil
Structure of the Partially-assembled gamma-Tubulin Ring Complex from Pig Brain
Descriptor: Gamma-tubulin complex component, Gamma-tubulin complex component 3, Mitotic spindle organizing protein 1, ...
Authors:Munoz-Hernandez, H, Wieczorek, M.
Deposit date:2024-07-12
Release date:2024-10-02
Last modified:2024-12-18
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Partial closure of the gamma-tubulin ring complex by CDK5RAP2 activates microtubule nucleation.
Dev.Cell, 59, 2024

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