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7PR5
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BU of 7pr5 by Molmil
Cocrystal of an RSL-N23H and sulfonato-thiacalix[4]arene - zinc complex
Descriptor: Fucose-binding lectin protein, GLYCEROL, ZINC ION, ...
Authors:Flood, R.J, Ramberg, K, Guagnini, F, Crowley, P.B.
Deposit date:2021-09-20
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Protein Frameworks with Thiacalixarene and Zinc.
Cryst.Growth Des., 22, 2022
7PHK
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BU of 7phk by Molmil
Human voltage-gated potassium channel Kv3.1 in dimeric state (with Zn)
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, POTASSIUM ION, Potassium voltage-gated channel, ...
Authors:Chi, G, Qian, P, Castro-Hartmann, P, Venkaya, S, Singh, N.K, McKinley, G, Mukhopadhyay, S.M.M, Marsden, B, MacLean, E.M, Fernandez-Cid, A, Pike, A.C.W, Sader, K, Burgess-Brown, N.A, Duerr, K.L.
Deposit date:2021-08-17
Release date:2022-03-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of the human Kv3.1 channel reveals gating control by the cytoplasmic T1 domain.
Nat Commun, 13, 2022
7PR3
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BU of 7pr3 by Molmil
Cocrystal Form I of a cytochrome c, sulfonato-thiacalix[4]arene - zinc cluster
Descriptor: Cytochrome c iso-1, HEME C, PHOSPHATE ION, ...
Authors:Flood, R.J, Ramberg, K, Guagnini, F, Crowley, P.B.
Deposit date:2021-09-20
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Protein Frameworks with Thiacalixarene and Zinc.
Cryst.Growth Des., 22, 2022
7NAV
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BU of 7nav by Molmil
Bacterial 30S ribosomal subunit assembly complex state D (Consensus refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7NAU
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BU of 7nau by Molmil
Bacterial 30S ribosomal subunit assembly complex state C (Consensus Refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.78 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7Q1Z
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BU of 7q1z by Molmil
Structure of formaldehyde cross-linked SARS-CoV-2 S glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Sulbaran, G, Effantin, G, Schoehn, G, Weissenhorn, W.
Deposit date:2021-10-22
Release date:2022-03-09
Last modified:2022-03-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Immunization with synthetic SARS-CoV-2 S glycoprotein virus-like particles protects macaques from infection.
Cell Rep Med, 3, 2022
7PKJ
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BU of 7pkj by Molmil
Streptococcus pyogenes apo GapN
Descriptor: BETA-MERCAPTOETHANOL, GLYCEROL, Putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, ...
Authors:Schindelin, H, Albert, L.
Deposit date:2021-08-25
Release date:2022-03-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.989 Å)
Cite:The Non-phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase GapN Is a Potential New Drug Target in Streptococcus pyogenes.
Front Microbiol, 13, 2022
7NAX
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BU of 7nax by Molmil
Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Lopez-Alonso, J, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7NAT
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BU of 7nat by Molmil
Bacterial 30S ribosomal subunit assembly complex state A (Consensus refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.59 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7NAR
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BU of 7nar by Molmil
Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Schedlbauer, A, Iturrioz, I, Ochoa-Lizarralde, B, Diercks, T, Kaminishi, T, Capuni, R, Astigarraga, E, Gil-Carton, D, Fucini, P, Connell, S.
Deposit date:2021-01-25
Release date:2021-12-08
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A conserved rRNA switch is central to decoding site maturation on the small ribosomal subunit.
Sci Adv, 7, 2021
7PKC
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BU of 7pkc by Molmil
Streptococcus pyogenes Apo-GapN C284S variant
Descriptor: GLYCEROL, Putative NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, SULFATE ION
Authors:Schindelin, H, Albert, L.
Deposit date:2021-08-25
Release date:2022-03-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Non-phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase GapN Is a Potential New Drug Target in Streptococcus pyogenes.
Front Microbiol, 13, 2022
7N8O
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BU of 7n8o by Molmil
High-resolution structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp. PCC 6803
Descriptor: (3R)-beta,beta-caroten-3-ol, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
Authors:Gisriel, C.J, Brudvig, G.W.
Deposit date:2021-06-15
Release date:2021-12-29
Last modified:2022-01-05
Method:ELECTRON MICROSCOPY (1.93 Å)
Cite:High-resolution cryo-electron microscopy structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp. PCC 6803.
Proc.Natl.Acad.Sci.USA, 119, 2022
7N9F
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BU of 7n9f by Molmil
Structure of the in situ yeast NPC
Descriptor: Dynein light chain 1, cytoplasmic, Nucleoporin 145c, ...
Authors:Villa, E, Singh, D, Ludtke, S.J, Akey, C.W, Rout, M.P, Echeverria, I, Suslov, S.
Deposit date:2021-06-17
Release date:2022-01-26
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (37 Å)
Cite:Comprehensive structure and functional adaptations of the yeast nuclear pore complex.
Cell, 185, 2022
7PTB
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BU of 7ptb by Molmil
Crystal structure of the SPD-2 domain of human CEP192
Descriptor: Centrosomal protein of 192 kDa, NITRATE ION
Authors:Rosa e Silva, I, van Breugel, M.
Deposit date:2021-09-26
Release date:2022-04-06
Last modified:2022-04-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural validation and assessment of AlphaFold2 predictions for centrosomal and centriolar proteins and their complexes.
Commun Biol, 5, 2022
7PSA
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BU of 7psa by Molmil
The acetogenin-bound complex I of Mus musculus resolved to 3.4 angstroms
Descriptor: (3~{S},5~{S})-5-methyl-3-[(13~{R})-13-oxidanyl-13-[(2~{R},5~{R})-5-[(2~{R},5~{R})-5-[(1~{R})-1-oxidanylundecyl]oxolan-2-yl]oxolan-2-yl]tridecyl]oxolan-2-one, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Grba, D, Hirst, J.
Deposit date:2021-09-22
Release date:2022-04-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-electron microscopy reveals how acetogenins inhibit mitochondrial respiratory complex I.
J.Biol.Chem., 298, 2022
7PNM
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BU of 7pnm by Molmil
Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 46C12 antibody Fab fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 46C12 antibody heavy chain, ...
Authors:Hurdiss, D.L.
Deposit date:2021-09-07
Release date:2022-04-20
Last modified:2022-11-09
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Antigenic structure of the human coronavirus OC43 spike reveals exposed and occluded neutralizing epitopes.
Nat Commun, 13, 2022
7NLC
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BU of 7nlc by Molmil
Crystallographic structure of human Tsg101 UEV domain in complex with a HEV ORF3 peptide
Descriptor: AMMONIUM ION, CHLORIDE ION, Protein ORF3, ...
Authors:Moschidi, D, Dupre, E, Villeret, V, Hanoulle, X.
Deposit date:2021-02-22
Release date:2022-03-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.398 Å)
Cite:Crystallographic structure of human Tsg101 UEV domain in complex with a HEV ORF3 peptide
To Be Published
7PWO
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BU of 7pwo by Molmil
Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
Descriptor: 40S ribosomal protein S21, 40S ribosomal protein S26, 40S ribosomal protein S30, ...
Authors:Hiregange, D.G, Rivalta, A, Bose, T, Breiner-Goldstein, E, Samiya, S, Cimicata, G, Kulakova, L, Zimmerman, E, Bashan, A, Herzberg, O, Yonath, A.
Deposit date:2021-10-07
Release date:2022-04-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Cryo-EM structure of the ancient eukaryotic ribosome from the human parasite Giardia lamblia.
Nucleic Acids Res., 50, 2022
7PWG
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BU of 7pwg by Molmil
Cryo-EM structure of large subunit of Giardia lamblia ribosome at 2.7 A resolution
Descriptor: 60S ribosomal protein L13, 60S ribosomal protein L18a, 60S ribosomal protein L27, ...
Authors:Hiregange, D.G, Rivalta, A, Bose, T, Breiner-Goldstein, E, Samiya, S, Cimicata, G, Kulakova, L, Zimmerman, E, Bashan, A, Herzberg, O, Yonath, A.
Deposit date:2021-10-06
Release date:2022-04-20
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Cryo-EM structure of the ancient eukaryotic ribosome from the human parasite Giardia lamblia.
Nucleic Acids Res., 50, 2022
7PO0
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BU of 7po0 by Molmil
Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3
Descriptor: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A.
Deposit date:2021-09-08
Release date:2022-06-15
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
Nature, 606, 2022
7PIR
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BU of 7pir by Molmil
70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
Deposit date:2021-08-23
Release date:2022-05-25
Last modified:2022-10-19
Method:ELECTRON MICROSCOPY (12.1 Å)
Cite:Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
7PNT
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BU of 7pnt by Molmil
Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Tfb1m
Descriptor: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A.
Deposit date:2021-09-08
Release date:2022-06-15
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
Nature, 606, 2022
7PNW
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BU of 7pnw by Molmil
Mouse mitochondrial ribosome small subunit lacking m5U modification
Descriptor: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A.
Deposit date:2021-09-08
Release date:2022-06-15
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
Nature, 606, 2022
7Q0R
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BU of 7q0r by Molmil
Structure of the Candida albicans 80S ribosome in complex with blasticidin s
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
Authors:Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
Deposit date:2021-10-16
Release date:2022-05-25
Last modified:2022-06-08
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7PNU
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BU of 7pnu by Molmil
Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA inward conformation
Descriptor: 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ...
Authors:Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A.
Deposit date:2021-09-08
Release date:2022-06-15
Last modified:2024-01-17
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Mechanism of mitoribosomal small subunit biogenesis and preinitiation.
Nature, 606, 2022

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PDB entries from 2024-10-02

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