Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 97 results

4POS
DownloadVisualize
BU of 4pos by Molmil
Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, ISOPROPYL ALCOHOL, ...
Authors:Khan, Z.M, Stehle, T.
Deposit date:2014-02-26
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate.
J.Virol., 88, 2014
4POR
DownloadVisualize
BU of 4por by Molmil
Structure of Human Polyomavirus 9 VP1 pentamer in complex with 3'-sialyllactose
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, ISOPROPYL ALCOHOL, ...
Authors:Khan, Z.M, Stehle, T.
Deposit date:2014-02-26
Release date:2014-04-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate.
J.Virol., 88, 2014
8AGO
DownloadVisualize
BU of 8ago by Molmil
BK Polyomavirus VP1 mutant E73Q
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AH1
DownloadVisualize
BU of 8ah1 by Molmil
BK Polyomavirus VP1 mutant N-Q
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.006 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AH0
DownloadVisualize
BU of 8ah0 by Molmil
BK Polyomavirus VP1 mutant VQQ
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
8AGH
DownloadVisualize
BU of 8agh by Molmil
BK Polyomavirus VP1 mutant E73A
Descriptor: CHLORIDE ION, GLYCEROL, Major capsid protein VP1
Authors:Sorin, M.N, Di Maio, A, Silva, L.M, Ebert, D, Delannoy, C, Nguyen, N.-K, Guerardel, Y, Chai, W, Halary, F, Renaudin-Autain, K, Liu, Y, Bressollette-Bodin, C, Stehle, T, McIlroy, D.
Deposit date:2022-07-20
Release date:2023-02-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Structural and functional analysis of natural capsid variants suggests sialic acid-independent entry of BK polyomavirus.
Cell Rep, 42, 2023
4U62
DownloadVisualize
BU of 4u62 by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with 3'-sialyllactose
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-acetyl-alpha-neuraminic acid, ...
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4U5Z
DownloadVisualize
BU of 4u5z by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1
Descriptor: Structural protein VP1
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4U61
DownloadVisualize
BU of 4u61 by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with 6'-sialyllactose
Descriptor: GLYCEROL, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose, ...
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
4U60
DownloadVisualize
BU of 4u60 by Molmil
Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with GM1 oligosaccharide
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-acetyl-alpha-neuraminic acid, ...
Authors:Stroh, L.J, Stehle, T.
Deposit date:2014-07-26
Release date:2015-08-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Trichodysplasia spinulosa-Associated Polyomavirus Uses a Displaced Binding Site on VP1 to Engage Sialylated Glycolipids.
Plos Pathog., 11, 2015
6Y67
DownloadVisualize
BU of 6y67 by Molmil
Structure of apo Finch Polyomavirus VP1
Descriptor: CHLORIDE ION, Capsid protein VP1
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.618 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y60
DownloadVisualize
BU of 6y60 by Molmil
Structure of Human Polyomavirus 12 VP1 in complex with 3'-Sialyllactosamine
Descriptor: Capsid protein VP1, N-acetyl-alpha-neuraminic acid, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y5X
DownloadVisualize
BU of 6y5x by Molmil
Structure of apo New Jersey Polyomavirus VP1
Descriptor: GLYCEROL, MAGNESIUM ION, VP1
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y6A
DownloadVisualize
BU of 6y6a by Molmil
Structure of Finch Polyomavirus VP1 in complex with 2-O-Methyl-5-N-acetyl-alpha-D-neuraminic acid
Descriptor: CHLORIDE ION, Capsid protein VP1, MAGNESIUM ION, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y61
DownloadVisualize
BU of 6y61 by Molmil
Structure of apo Sheep Polyomavirus VP1
Descriptor: Capsid protein VP1, GLYCEROL
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y66
DownloadVisualize
BU of 6y66 by Molmil
Structure of Goose Hemorrhagic Polyomavirus VP1 in complex with 2-O-Methyl-5-N-acetyl-alpha-D-neuraminic acid
Descriptor: 1,2-ETHANEDIOL, 2-O-methyl-5-N-acetyl-alpha-D-neuraminic acid, Capsid protein VP1, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y64
DownloadVisualize
BU of 6y64 by Molmil
Structure of Sheep Polyomavirus VP1 in complex with 6'-Sialyllactosamine
Descriptor: 1,2-ETHANEDIOL, Capsid protein VP1, GLYCEROL, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y63
DownloadVisualize
BU of 6y63 by Molmil
Structure of Sheep Polyomavirus VP1 in complex with 3'-Sialyllactosamine
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Capsid protein VP1, MAGNESIUM ION, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.651 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y5Z
DownloadVisualize
BU of 6y5z by Molmil
Structure of apo Human Polyomavirus 12 VP1
Descriptor: Capsid protein VP1, GLYCEROL
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.549 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y5Y
DownloadVisualize
BU of 6y5y by Molmil
Structure of New Jersey Polyomavirus VP1 in complex with 3'-Sialyllactose
Descriptor: GLYCEROL, MAGNESIUM ION, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6Y65
DownloadVisualize
BU of 6y65 by Molmil
Structure of apo Goose Hemorrhagic Polyomavirus VP1
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Capsid protein VP1, ...
Authors:Stroh, L.J, Rustmeier, N.H, Stehle, T.
Deposit date:2020-02-26
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Basis and Evolution of Glycan Receptor Specificities within the Polyomavirus Family.
Mbio, 11, 2020
6ESB
DownloadVisualize
BU of 6esb by Molmil
BK polyomavirus + 20 mM GT1b oligosaccharide
Descriptor: CALCIUM ION, Capsid protein VP1, Minor capsid protein VP2, ...
Authors:Hurdiss, D.L, Ranson, N.A.
Deposit date:2017-10-20
Release date:2018-05-02
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:The Structure of an Infectious Human Polyomavirus and Its Interactions with Cellular Receptors.
Structure, 26, 2018
<1234

 

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon