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PDB: 40 results

2IE2
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BU of 2ie2 by Molmil
The 1.7 A crystal structure of Dronpa: a photoswitchable green fluorescent protein
Descriptor: Fluorescent protein Dronpa
Authors:Rossjohn, J, Wilmann, P.G.
Deposit date:2006-09-16
Release date:2006-11-14
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 1.7 A Crystal Structure of Dronpa: A Photoswitchable Green Fluorescent Protein
J.Mol.Biol., 364, 2006
7RRH
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BU of 7rrh by Molmil
Crystal structure of fast switching R66M/M159T mutant of fluorescent protein Dronpa (Dronpa2)
Descriptor: Fluorescent protein Dronpa
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2021-08-09
Release date:2021-10-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme.
J.Am.Chem.Soc., 144, 2022
2Z1O
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BU of 2z1o by Molmil
Crystal structure of a photoswitchable GFP-like protein Dronpa in the bright-state
Descriptor: Fluorescent protein Dronpa
Authors:Kikuchi, A, Jeyakanthan, J, Taka, J, Shiro, Y, Mizuno, H, Miyawaki, A.
Deposit date:2007-05-10
Release date:2008-05-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Light-dependent regulation of structural flexibility in a photochromic fluorescent protein
Proc.Natl.Acad.Sci.Usa, 105, 2008
2IOV
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BU of 2iov by Molmil
Bright-state structure of the reversibly switchable fluorescent protein Dronpa
Descriptor: Fluorescent protein Dronpa
Authors:Stiel, A.C, Trowitzsch, S, Weber, G, Andresen, M, Eggeling, C, Hell, S.W, Jakobs, S, Wahl, M.C.
Deposit date:2006-10-11
Release date:2006-12-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 A bright-state structure of the reversibly switchable fluorescent protein Dronpa guides the generation of fast switching variants
Biochem.J., 402, 2007
2Z6Z
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BU of 2z6z by Molmil
Crystal structure of a photoswitchable GFP-like protein Dronpa in the bright-state
Descriptor: Fluorescent protein Dronpa
Authors:Kikuchi, A, Jeyakanthan, J, Taka, J, Shiro, Y, Mizuno, H, Miyawaki, A.
Deposit date:2007-08-09
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Light-dependent regulation of structural flexibility in a photochromic fluorescent protein.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2GX2
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BU of 2gx2 by Molmil
Crystal structural and functional analysis of GFP-like fluorescent protein Dronpa
Descriptor: MAGNESIUM ION, fluorescent protein Dronpa
Authors:Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K.
Deposit date:2006-05-08
Release date:2007-05-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S
Biochem.Biophys.Res.Commun., 354, 2007
5HZU
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BU of 5hzu by Molmil
Crystal structure of Dronpa-Ni2+
Descriptor: Fluorescent protein Dronpa, NICKEL (II) ION
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2016-02-03
Release date:2017-03-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal structures of Dronpa complexed with quenchable metal ions provide insight into metal biosensor development
FEBS Lett., 590, 2016
6MYB
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BU of 6myb by Molmil
Room-temperature structure of deuterated Tetdron (isomorph 1)
Descriptor: Photoswitchable protein Tetdron
Authors:Dajnowicz, S, Kovalevsky, A.
Deposit date:2018-11-01
Release date:2019-11-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Room-temperature in crystallo photo-induced deprotonation and tetramerization of photo-switchable protein Padron2.0
To Be Published
2GX0
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BU of 2gx0 by Molmil
Crystal structural and functional analysis of GFP-like fluorescent protein
Descriptor: fluorescent protein Dronpa
Authors:Hwang, K.Y, Nam, K.-H, Park, S.-Y, Sugiyama, K.
Deposit date:2006-05-08
Release date:2007-05-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S
Biochem.Biophys.Res.Commun., 354, 2007
7RRK
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BU of 7rrk by Molmil
Crystal structure of fast switching M159E mutant of fluorescent protein Dronpa (Dronpa2)
Descriptor: Fluorescent protein Dronpa
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2021-08-09
Release date:2021-10-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.929 Å)
Cite:Energetic Basis and Design of Enzyme Function Demonstrated Using GFP, an Excited-State Enzyme.
J.Am.Chem.Soc., 144, 2022
2POX
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BU of 2pox by Molmil
Dark state structure of the reversibly switchable fluorescent protein Dronpa
Descriptor: Fluorescent protein Dronpa
Authors:Trowitzsch, S, Weber, G, Wahl, M.C.
Deposit date:2007-04-27
Release date:2007-07-17
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Structural basis for reversible photoswitching in Dronpa
Proc.Natl.Acad.Sci.Usa, 104, 2007
4EMQ
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BU of 4emq by Molmil
Crystal structure of a single mutant of Dronpa, the green-on-state PDM1-4
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, ...
Authors:Ngan, N.B, Van Hecke, K, Van Meervelt, L.
Deposit date:2012-04-12
Release date:2012-11-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for the influence of a single mutation K145N on the oligomerization and photoswitching rate of Dronpa.
Acta Crystallogr.,Sect.D, 68, 2012
4HQ8
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BU of 4hq8 by Molmil
Crystal structure of a green-to-red photoconvertible DRONPA, pcDRONPA in the green-on-state
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, ...
Authors:Nguyen Bich, N, Van Meervelt, L.
Deposit date:2012-10-25
Release date:2013-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Green-to-red photoconvertible Dronpa mutant for multimodal super-resolution fluorescence microscopy
ACS Nano, 8, 2014
6NQK
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BU of 6nqk by Molmil
Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2), Y63(3-FY)
Descriptor: Fluorescent protein Dronpa
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-01-21
Release date:2019-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic control of photoisomerization pathways in proteins.
Science, 367, 2020
6NQJ
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BU of 6nqj by Molmil
Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2)
Descriptor: Fluorescent protein Dronpa
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-01-21
Release date:2019-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Electrostatic control of photoisomerization pathways in proteins.
Science, 367, 2020
2Z6Y
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BU of 2z6y by Molmil
Crystal structure of a photoswitchable GFP-like protein Dronpa in the bright-state
Descriptor: Fluorescent protein Dronpa
Authors:Kikuchi, A, Jeyakanthan, J, Taka, J, Shiro, Y, Mizuno, H, Miyawaki, A.
Deposit date:2007-08-09
Release date:2008-07-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Light-dependent regulation of structural flexibility in a photochromic fluorescent protein.
Proc.Natl.Acad.Sci.Usa, 105, 2008
4UTS
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BU of 4uts by Molmil
Room temperature crystal structure of the fast switching M159T mutant of fluorescent protein Dronpa
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:Kaucikas, M, Fitzpatrick, A, Bryan, E, Struve, A, Henning, R, Kosheleva, I, Srajer, V, van Thor, J.J.
Deposit date:2014-07-22
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Room Temperature Crystal Structure of the Fast Switching M159T Mutant of the Fluorescent Protein Dronpa.
Proteins, 83, 2015
6MXW
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BU of 6mxw by Molmil
Room-temperature structure of hydrogenated Tetdron (isomorph 1)
Descriptor: Photoswitchable protein Tetdron
Authors:Dajnowicz, S, Kovalevsky, A.
Deposit date:2018-10-31
Release date:2019-11-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Room-temperature in crystallo photo-induced deprotonation and tetramerization of photo-switchable protein Padron2.0
To Be Published
4HQC
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BU of 4hqc by Molmil
Crystal structure of a green-to-red photoconvertible DRONPA, pcDRONPA in the red-on-state
Descriptor: DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, TETRAETHYLENE GLYCOL, ...
Authors:Nguyen Bich, N, Van Meervelt, L.
Deposit date:2012-10-25
Release date:2013-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Green-to-red photoconvertible Dronpa mutant for multimodal super-resolution fluorescence microscopy
ACS Nano, 8, 2014
4HQ9
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BU of 4hq9 by Molmil
Crystal structure of a green-to-red photoconvertible DRONPA, pcDRONPA in the green-off-state
Descriptor: DI(HYDROXYETHYL)ETHER, Fluorescent protein Dronpa, TETRAETHYLENE GLYCOL, ...
Authors:Nguyen Bich, N, Van Meervelt, L.
Deposit date:2012-10-25
Release date:2013-11-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Green-to-red photoconvertible Dronpa mutant for multimodal super-resolution fluorescence microscopy
ACS Nano, 8, 2014
6NQN
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BU of 6nqn by Molmil
Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2), Y63(3-BrY)
Descriptor: Fluorescent protein Dronpa
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-01-21
Release date:2019-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Electrostatic control of photoisomerization pathways in proteins.
Science, 367, 2020
6NQO
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BU of 6nqo by Molmil
Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2), Y63(3-IY)
Descriptor: Fluorescent protein Dronpa
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-01-21
Release date:2019-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Electrostatic control of photoisomerization pathways in proteins.
Science, 367, 2020
6NQL
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BU of 6nql by Molmil
Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2), Y63(3-ClY)
Descriptor: Fluorescent protein Dronpa, TRIETHYLENE GLYCOL
Authors:Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
Deposit date:2019-01-21
Release date:2019-06-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.147 Å)
Cite:Electrostatic control of photoisomerization pathways in proteins.
Science, 367, 2020
4IZN
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BU of 4izn by Molmil
Structure of pcDronpa-A69T mutant
Descriptor: Fluorescent protein Dronpa, POTASSIUM ION
Authors:De Zitter, E, Nguyen Bich, N, Van Meervelt, L, Moeyaert, B.
Deposit date:2013-01-30
Release date:2014-02-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Green-to-red photoconvertible Dronpa mutant for multimodal super-resolution fluorescence microscopy
ACS Nano, 8, 2014
5HZS
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BU of 5hzs by Molmil
Crystal structure of Dronpa-Co2+
Descriptor: COBALT (II) ION, Fluorescent protein Dronpa
Authors:Hwang, K.Y, Nam, K.H.
Deposit date:2016-02-03
Release date:2017-03-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structures of Dronpa complexed with quenchable metal ions provide insight into metal biosensor development
FEBS Lett., 590, 2016

 

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