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PDB: 22 results

9BU5
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BU of 9bu5 by Molmil
CC ProXp-ala apo solution structure
Descriptor: DNA-binding protein, putative
Authors:Duran, A.D, Foster, M.P.
Deposit date:2024-05-16
Release date:2024-10-16
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:NMR-based solution structure of the Caulobacter crescentus ProXp-ala trans-editing enzyme.
Biomol.Nmr Assign., 18, 2024
8HUZ
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BU of 8huz by Molmil
the structure of trans-editing factor ProX
Descriptor: Prolyl-tRNA synthetase associated domain-containing protein 1
Authors:Chen, M, Zhou, X.
Deposit date:2022-12-25
Release date:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:the structure of trans-editing factor ProX
To Be Published
5VXB
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BU of 5vxb by Molmil
Crystal structure of Caulobacter crescentus ProXp-ala at 1.69 Angstrom
Descriptor: ProXp-ala
Authors:Foster, M.P, Musier-Forsyth, K, Nakanishi, K, Ma, X.
Deposit date:2017-05-23
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Conformational and chemical selection by a trans-acting editing domain.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1DBU
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BU of 1dbu by Molmil
Crystal structure of cysteinyl-tRNA(Pro) deacylase protein from H. influenzae (HI1434)
Descriptor: MERCURY (II) ION, cysteinyl-tRNA(Pro) deacylase
Authors:Zhang, H, Huang, K, Li, Z, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
2Z0X
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BU of 2z0x by Molmil
Crystal structure of ProX-CysSA complex from T. thermophilus
Descriptor: 5'-O-(N-(L-CYSTEINYL)-SULFAMOYL)ADENOSINE, Putative uncharacterized protein TTHA1699
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of ProX-CysSA complex from T. thermophilus
To be Published
2Z0K
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BU of 2z0k by Molmil
Crystal structure of ProX-AlaSA complex from T. thermophilus
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, Putative uncharacterized protein TTHA1699
Authors:Murayama, K, Kato-Murayama, M, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of ProX-AlaSA complex from T. thermophilus
to be published
2CX5
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BU of 2cx5 by Molmil
Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
Descriptor: A PUTATIVE TRANS-EDITING ENZYME
Authors:Murayama, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-06-28
Release date:2005-12-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of a putative trans-editing enzyme for prolyl tRNA synthetase
To be Published
2DXA
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BU of 2dxa by Molmil
Crystal structure of trans editing enzyme ProX from E.coli
Descriptor: CHLORIDE ION, Protein ybaK
Authors:Kato-Murayama, M, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-08-25
Release date:2007-02-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of trans editing enzyme ProX from E.coli
To be Published
1DBX
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BU of 1dbx by Molmil
Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)
Descriptor: cysteinyl-tRNA(Pro) deacylase
Authors:Zhang, H, Huang, K, Li, Z, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000
3OP6
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BU of 3op6 by Molmil
Crystal structure of an oligo-nucleotide binding protein (lpg1207) from Legionella pneumophila subsp. pneumophila str. philadelphia 1 at 2.00 A resolution
Descriptor: 1,2-ETHANEDIOL, Uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2010-08-31
Release date:2010-09-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of an oligo-nucleotide binding protein (lpg1207) from Legionella pneumophila subsp. pneumophila str. philadelphia 1 at 2.00 A resolution
To be published
1WDV
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BU of 1wdv by Molmil
Crystal structure of hypothetical protein APE2540
Descriptor: hypothetical protein APE2540
Authors:Murayama, K, Kato-Murayama, M, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-18
Release date:2004-11-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a putative trans-editing enzyme for prolyl-tRNA synthetase from Aeropyrum pernix K1 at 1.7 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
1VKI
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BU of 1vki by Molmil
Crystal structure of a putative oligo-nucleotide binding protein (atu3699, agr_l_2275) from agrobacterium tumefaciens str. c58 at 1.60 A resolution
Descriptor: GLYCEROL, HYPOTHETICAL PROTEIN ATU3699, SULFATE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-05-24
Release date:2004-06-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of hypothetical protein (ATU3699) from Agrobacterium tumefaciens at 1.60 A resolution
To be published
1VJF
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BU of 1vjf by Molmil
CRYSTAL STRUCTURE OF A PUTATIVE DNA-BINDING PROTEIN (CC_0111) FROM CAULOBACTER CRESCENTUS CB15 AT 1.62 A RESOLUTION
Descriptor: CHLORIDE ION, DNA-binding protein, putative, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2004-02-11
Release date:2004-03-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Crystal structure of putative DNA-binding protein from Caulobacter crescentus at 1.62 A resolution
To be published
3RI0
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BU of 3ri0 by Molmil
Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
Descriptor: BB_2cx5_001, GLYCEROL, SULFATE ION
Authors:Azoitei, M.L, Ban, Y.A, Julien, J.P, Bryson, S, Schroeter, A, Kalyuzhniy, O, Porter, J.R, Adachi, Y, Baker, D, Szabo, E, Pai, E.F, Schief, W.R.
Deposit date:2011-04-12
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
J.Mol.Biol., 415, 2012
3RIJ
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BU of 3rij by Molmil
Epitope backbone grafting by computational design for improved presentation of linear epitopes on scaffold proteins
Descriptor: GLYCEROL, SC_2cx5
Authors:Azoitei, M.L, Ban, Y.A, Julien, J.P, Bryson, S, Schroeter, A, Kalyuzhniy, O, Porter, J.R, Adachi, Y, Baker, D, Szabo, E, Pai, E.F, Schief, W.R.
Deposit date:2011-04-13
Release date:2011-11-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
J.Mol.Biol., 415, 2012
9QZK
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BU of 9qzk by Molmil
SadB of Pseudomonas aeruginosa
Descriptor: HDOD domain-containing protein
Authors:Opatowsky, Y, Sporny, M.
Deposit date:2025-04-23
Release date:2025-05-28
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:SadB, a mediator of AmrZ proteolysis and biofilm development in Pseudomonas aeruginosa.
NPJ Biofilms Microbiomes, 11, 2025
5UCM
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BU of 5ucm by Molmil
Crystal Structure of Prolyl-tRNA Synthetase from Pseudomonas aeruginosa
Descriptor: MAGNESIUM ION, Proline--tRNA ligase
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-12-22
Release date:2017-02-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Characterization and structure determination of prolyl-tRNA synthetase from Pseudomonas aeruginosa and development as a screening platform.
Protein Sci., 2019
2J3M
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BU of 2j3m by Molmil
PROLYL-TRNA SYNTHETASE FROM ENTEROCOCCUS FAECALIS COMPLEXED WITH ATP, manganese and prolinol
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, PROLYL-TRNA SYNTHETASE, ...
Authors:Crepin, T, Yaremchuk, A, Tukalo, M, Cusack, S.
Deposit date:2006-08-22
Release date:2006-10-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Two Bacterial Prolyl-tRNA Synthetases with and without a Cis-Editing Domain.
Structure, 14, 2006
2J3L
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BU of 2j3l by Molmil
Prolyl-tRNA synthetase from Enterococcus faecalis complexed with a prolyl-adenylate analogue ('5'-O-(N-(L-PROLYL)-SULFAMOYL)ADENOSINE)
Descriptor: '5'-O-(N-(L-PROLYL)-SULFAMOYL)ADENOSINE, PROLYL-TRNA SYNTHETASE, SULFATE ION
Authors:Crepin, T, Yaremchuk, A, Tukalo, M, Cusack, S.
Deposit date:2006-08-22
Release date:2006-10-11
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Two Bacterial Prolyl-tRNA Synthetases with and without a Cis-Editing Domain.
Structure, 14, 2006
8W9I
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BU of 8w9i by Molmil
Crystal structure of bacterial prolyl-tRNA synthetase in complex with inhibitor PAA-5
Descriptor: (2~{S})-~{N}-[3-(4-azanylquinazolin-7-yl)phenyl]sulfonylpyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Luo, Z, Zhou, H.
Deposit date:2023-09-05
Release date:2024-09-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure-Guided Fluorine Scanning Accelerates the Discovery of Potent and Selective Inhibitors Against Bacterial Prolyl-tRNA Synthetase
To Be Published
8W8L
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BU of 8w8l by Molmil
Crystal structure of bacterial prolyl-tRNA synthetase in complex with inhibitor PAA-38
Descriptor: (2~{S})-~{N}-[5-(4-azanyl-8-fluoranyl-quinazolin-7-yl)-2-fluoranyl-phenyl]sulfonylpyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, MAGNESIUM ION, ...
Authors:Luo, Z, Zhou, H.
Deposit date:2023-09-03
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.824 Å)
Cite:Structure-Guided Fluorine Scanning Accelerates the Discovery of Potent and Selective Inhibitors Against Bacterial Prolyl-tRNA Synthetase
To Be Published
8W8J
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BU of 8w8j by Molmil
Crystal structure of bacterial prolyl-tRNA synthetase in complex with inhibitor PAA-19
Descriptor: (2~{S})-~{N}-[3-(4-azanyl-5-fluoranyl-quinazolin-7-yl)phenyl]sulfonylpyrrolidine-2-carboxamide, 1,2-ETHANEDIOL, Proline--tRNA ligase
Authors:Luo, Z, Zhou, H.
Deposit date:2023-09-03
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.807 Å)
Cite:Structure-Guided Fluorine Scanning Accelerates the Discovery of Potent and Selective Inhibitors Against Bacterial Prolyl-tRNA Synthetase
To Be Published

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