Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 925 results

5JZK
DownloadVisualize
BU of 5jzk by Molmil
The Structure of Ultra Stable Green Fluorescent Protein
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Yong, K.J, Gunn, N.J, Scott, D.J, Griffin, M.D.W.
Deposit date:2016-05-17
Release date:2017-12-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Novel Ultra-Stable, Monomeric Green Fluorescent Protein For Direct Volumetric Imaging of Whole Organs Using CLARITY.
Sci Rep, 8, 2018
6CIU
DownloadVisualize
BU of 6ciu by Molmil
Structure of a Thr-rich interface in an Azami Green tetramer
Descriptor: Azami-Green
Authors:Oi, C, Lim, C.S, Knecht, K.M, Xiong, Y, Regan, L.
Deposit date:2018-02-25
Release date:2018-09-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A threonine zipper that mediates protein-protein interactions: Structure and prediction.
Protein Sci., 27, 2018
4R6B
DownloadVisualize
BU of 4r6b by Molmil
Rational Design of Enhanced Photoresistance in a Photoswitchable Fluorescent Protein
Descriptor: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Duan, C, Adam, V, Byrdin, M, Bourgeois, D.
Deposit date:2014-08-23
Release date:2015-02-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational design of enhanced photoresistance in a photoswitchable fluorescent protein.
Methods Appl Fluoresc, 3, 2015
4UTS
DownloadVisualize
BU of 4uts by Molmil
Room temperature crystal structure of the fast switching M159T mutant of fluorescent protein Dronpa
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:Kaucikas, M, Fitzpatrick, A, Bryan, E, Struve, A, Henning, R, Kosheleva, I, Srajer, V, van Thor, J.J.
Deposit date:2014-07-22
Release date:2015-06-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Room Temperature Crystal Structure of the Fast Switching M159T Mutant of the Fluorescent Protein Dronpa.
Proteins, 83, 2015
5T3I
DownloadVisualize
BU of 5t3i by Molmil
cyan fluorescence protein soaked with selenourea for 5 min
Descriptor: Green fluorescent protein, PHOSPHATE ION, selenourea
Authors:Luo, Z, Dauter, Z.
Deposit date:2016-08-25
Release date:2016-11-30
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures.
Sci Rep, 6, 2016
6PFS
DownloadVisualize
BU of 6pfs by Molmil
rsEGFP2 with a chlorinated chromophore in the fluorescent on-state in a contracted unit cell
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
6PFT
DownloadVisualize
BU of 6pft by Molmil
rsEGFP2 with a chlorinated chromophore in the non-fluorescent off-state
Descriptor: Green fluorescent protein, SULFATE ION
Authors:Chang, J, Romei, M.G, Boxer, S.G.
Deposit date:2019-06-22
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
2VVI
DownloadVisualize
BU of 2vvi by Molmil
IrisFP fluorescent protein in its green form, trans conformation
Descriptor: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Adam, V, Lelimousin, M, Boehme, S, Desfonds, G, Nienhaus, K, Field, M.J, Wiedenmann, J, McSweeney, S, Nienhaus, G.U, Bourgeois, D.
Deposit date:2008-06-09
Release date:2008-11-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Characterization of Irisfp, an Optical Highlighter Undergoing Multiple Photo-Induced Transformations.
Proc.Natl.Acad.Sci.USA, 105, 2008
2VVH
DownloadVisualize
BU of 2vvh by Molmil
IrisFP fluorescent protein in its green form, cis conformation
Descriptor: Green to red photoconvertible GFP-like protein EosFP, SULFATE ION, SULFITE ION
Authors:Adam, V, Lelimousin, M, Boehme, S, Desfonds, G, Nienhaus, K, Field, M.J, Wiedenmann, J, McSweeney, S, Nienhaus, G.U, Bourgeois, D.
Deposit date:2008-06-09
Release date:2008-11-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Characterization of Irisfp, an Optical Highlighter Undergoing Multiple Photo-Induced Transformations.
Proc.Natl.Acad.Sci.USA, 105, 2008
7AMU
DownloadVisualize
BU of 7amu by Molmil
Crystal structure of rsEGFP2 T204A in its fluorescent on-state
Descriptor: GLYCEROL, Green fluorescent protein, SULFATE ION
Authors:Moreno-Chicano, T, Schlichting, I, Hartmann, E, Zala, N, Colletier, J.-P, Weik, M.
Deposit date:2020-10-09
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of rsEGFP2 in its fluorescent on-state at pH 8.0
To Be Published
7AMF
DownloadVisualize
BU of 7amf by Molmil
Crystal structure of rsFolder2 in its non-fluorescent off-state
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Moreno-Chicano, T, El Khatib, M, Colletier, J.-P.
Deposit date:2020-10-08
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.
Chemphyschem, 23, 2022
7AMB
DownloadVisualize
BU of 7amb by Molmil
Crystal structure of rsFolder2 in its fluorescent on-state
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Moreno-Chicano, T, El Khatib, M, Colletier, J.-P.
Deposit date:2020-10-08
Release date:2022-08-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.
Chemphyschem, 23, 2022
2VZX
DownloadVisualize
BU of 2vzx by Molmil
Structural and spectroscopic characterization of photoconverting fluorescent protein Dendra2
Descriptor: GLYCEROL, Green fluorescent protein, TETRAETHYLENE GLYCOL
Authors:Adam, V, Nienhaus, K, Bourgeois, D, Nienhaus, G.U.
Deposit date:2008-08-06
Release date:2009-06-09
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Enhanced Photoconversion Yield in Green Fluorescent Protein-Like Protein Dendra2.
Biochemistry, 48, 2009
8IM1
DownloadVisualize
BU of 8im1 by Molmil
mCherry-LaM1 complex
Descriptor: LaM1, MCherry fluorescent protein, SULFATE ION
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
8ILX
DownloadVisualize
BU of 8ilx by Molmil
mCherry-LaM3 complex
Descriptor: LAM3, MCherry fluorescent protein
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
7KM4
DownloadVisualize
BU of 7km4 by Molmil
Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein
Descriptor: Green fluorescent protein
Authors:Nguyen, T, Nicely, N.I, McCafferty, D.G.
Deposit date:2020-11-02
Release date:2021-11-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of Oxidized Version of Redox-Sensitive Superfolder Green Fluorescent Protein
To be Published
8I4J
DownloadVisualize
BU of 8i4j by Molmil
Structure of wild-type Azami Green from Galaxea fascicularis
Descriptor: Azami-Green
Authors:Otsubo, S, Takekawa, N, Imamura, H, Imada, K.
Deposit date:2023-01-19
Release date:2023-11-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Red fluorescent proteins engineered from green fluorescent proteins.
Proc.Natl.Acad.Sci.USA, 120, 2023
3ZUL
DownloadVisualize
BU of 3zul by Molmil
Padron on (fluorescent) Icis intermediate state
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:Faro, A.R, Carpentier, P, Bougeois, D.
Deposit date:2011-07-19
Release date:2011-11-09
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron.
J.Am.Chem.Soc., 133, 2011
7LG4
DownloadVisualize
BU of 7lg4 by Molmil
Green fluorescent protein from Aequorea macrodactyla - amacGFP
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Bozhanova, N.G, Meiler, J.
Deposit date:2021-01-19
Release date:2021-01-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Heterogeneity of the GFP fitness landscape and data-driven protein design.
Elife, 11, 2022
3ZUF
DownloadVisualize
BU of 3zuf by Molmil
Padron off (non-fluorescent) Btrans
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:REGIS Faro, A, Carpentier, P, Bourgeois, D.
Deposit date:2011-07-18
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron.
J.Am.Chem.Soc., 133, 2011
3ZUJ
DownloadVisualize
BU of 3zuj by Molmil
Padron on (fluorescent) ABcis
Descriptor: FLUORESCENT PROTEIN DRONPA
Authors:REGIS Faro, A, Carpentier, P, Bourgeois, D.
Deposit date:2011-07-19
Release date:2011-08-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.345 Å)
Cite:Low-Temperature Chromophore Isomerization Reveals the Photoswitching Mechanism of the Fluorescent Protein Padron.
J.Am.Chem.Soc., 133, 2011
3ZTF
DownloadVisualize
BU of 3ztf by Molmil
X-ray Structure of the Cyan Fluorescent Protein mTurquoise2 (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-07-07
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
2OGR
DownloadVisualize
BU of 2ogr by Molmil
Crystal Structure of Yellow Fluorescent Protein from Zoanthus sp. at 1.8 A Resolution
Descriptor: FLUORESCENT PROTEIN FP538
Authors:Pletneva, N.V, Pletnev, S.V, Tikhonova, T.V, Pletnev, V.Z.
Deposit date:2007-01-08
Release date:2007-09-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structure of yellow fluorescent protein zYFP538 from Zoanthus sp. at the resolution 1.8 angstrom
Bioorg.Khim., 33
2O24
DownloadVisualize
BU of 2o24 by Molmil
Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-Cl Complex
Descriptor: CHLORIDE ION, Green fluorescent protein
Authors:Garau, G.
Deposit date:2006-11-29
Release date:2007-05-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP.
Biophys.J., 93, 2007
2O29
DownloadVisualize
BU of 2o29 by Molmil
Spectroscopic and Structural Study of the Heterotropic Linkage between Halide and Proton Ion Binding to Gfp Proteins: E2(GFP)-BR Complex
Descriptor: BROMIDE ION, Green fluorescent protein
Authors:Garau, G.
Deposit date:2006-11-29
Release date:2007-05-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Spectroscopic and Structural Study of Proton and Halide Ion Cooperative Binding to GFP.
Biophys.J., 93, 2007

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon