2FM4
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5WOY
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2R82
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![BU of 2r82 by Molmil](/molmil-images/mine/2r82) | Pyruvate phosphate dikinase (PPDK) triple mutant R219E/E271R/S262D adapts a second conformational state | Descriptor: | Pyruvate, phosphate dikinase, SULFATE ION | Authors: | Lim, K, Read, R.J, Chen, C.C, Herzberg, O. | Deposit date: | 2007-09-10 | Release date: | 2008-01-01 | Last modified: | 2023-08-30 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | Swiveling domain mechanism in pyruvate phosphate dikinase. Biochemistry, 46, 2007
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5LU4
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![BU of 5lu4 by Molmil](/molmil-images/mine/5lu4) | C4-type pyruvate phosphate dikinase: conformational intermediate of central domain in the swiveling mechanism | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PYRUVIC ACID, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-09-08 | Release date: | 2017-05-24 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Trapped intermediate state of plant pyruvate phosphate dikinase indicates substeps in catalytic swiveling domain mechanism. Protein Sci., 26, 2017
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8A8E
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![BU of 8a8e by Molmil](/molmil-images/mine/8a8e) | PPSA C terminal octahedral structure | Descriptor: | Phosphoenolpyruvate synthase | Authors: | Song, W. | Deposit date: | 2022-06-22 | Release date: | 2023-07-05 | Method: | ELECTRON MICROSCOPY (2.9 Å) | Cite: | Survival strategies in the heat Lysine acetylation stabilizes the quaternary structure of a Mega-Dalton hyperthermophilic PEP-synthase To Be Published
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1ZYM
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![BU of 1zym by Molmil](/molmil-images/mine/1zym) | AMINO TERMINAL DOMAIN OF ENZYME I FROM ESCHERICHIA COLI | Descriptor: | ENZYME I | Authors: | Liao, D.-I, Davies, D.R. | Deposit date: | 1996-05-21 | Release date: | 1996-12-07 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The first step in sugar transport: crystal structure of the amino terminal domain of enzyme I of the E. coli PEP: sugar phosphotransferase system and a model of the phosphotransfer complex with HPr. Structure, 4, 1996
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1DIK
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![BU of 1dik by Molmil](/molmil-images/mine/1dik) | PYRUVATE PHOSPHATE DIKINASE | Descriptor: | PYRUVATE PHOSPHATE DIKINASE, SULFATE ION | Authors: | Herzberg, O, Chen, C.C.H. | Deposit date: | 1995-12-06 | Release date: | 1996-04-03 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Swiveling-domain mechanism for enzymatic phosphotransfer between remote reaction sites. Proc.Natl.Acad.Sci.USA, 93, 1996
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1VBG
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![BU of 1vbg by Molmil](/molmil-images/mine/1vbg) | Pyruvate Phosphate Dikinase from Maize | Descriptor: | MAGNESIUM ION, SULFATE ION, pyruvate,orthophosphate dikinase | Authors: | Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-26 | Release date: | 2005-03-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion Biochemistry, 44, 2005
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2X0S
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5FBU
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![BU of 5fbu by Molmil](/molmil-images/mine/5fbu) | Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin-phosphate | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Phosphoenolpyruvate synthase, ... | Authors: | Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) | Deposit date: | 2015-12-14 | Release date: | 2015-12-30 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Rifampin phosphotransferase is an unusual antibiotic resistance kinase. Nat Commun, 7, 2016
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1VBH
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![BU of 1vbh by Molmil](/molmil-images/mine/1vbh) | Pyruvate Phosphate Dikinase with bound Mg-PEP from Maize | Descriptor: | MAGNESIUM ION, PHOSPHOENOLPYRUVATE, SULFATE ION, ... | Authors: | Nakanishi, T, Nakatsu, T, Matsuoka, M, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-26 | Release date: | 2005-03-08 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structures of pyruvate phosphate dikinase from maize revealed an alternative conformation in the swiveling-domain motion Biochemistry, 44, 2005
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5T12
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![BU of 5t12 by Molmil](/molmil-images/mine/5t12) | N-terminal domain of Enzyme 1 - Nitrogen | Descriptor: | IODIDE ION, Phosphoenolpyruvate--protein phosphotransferase | Authors: | Stanley, A.M, Botos, I, Buchanan, S.K. | Deposit date: | 2016-08-17 | Release date: | 2016-11-23 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (2.299 Å) | Cite: | Structure of the NPr:EIN(Ntr) Complex: Mechanism for Specificity in Paralogous Phosphotransferase Systems. Structure, 24, 2016
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2WQD
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![BU of 2wqd by Molmil](/molmil-images/mine/2wqd) | Crystal structure of enzyme I of the phosphoenolpyruvate:sugar phosphotransferase system in the dephosphorylated state | Descriptor: | CALCIUM ION, PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE | Authors: | Oberholzer, A.E, Schneider, P, Siebold, C, Baumann, U, Erni, B. | Deposit date: | 2009-08-19 | Release date: | 2009-10-13 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal Structure of Enzyme I of the Phosphoenolpyruvate:Sugar Phosphotransferase System in the Dephosphorylated State. J.Biol.Chem., 284, 2009
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5FBT
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![BU of 5fbt by Molmil](/molmil-images/mine/5fbt) | Crystal structure of rifampin phosphotransferase RPH-Lm from Listeria monocytogenes in complex with rifampin | Descriptor: | CHLORIDE ION, Phosphoenolpyruvate synthase, Rifampin | Authors: | Stogios, P.J, Wawrzak, Z, Skarina, T, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) | Deposit date: | 2015-12-14 | Release date: | 2015-12-30 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (2.702 Å) | Cite: | Rifampin phosphotransferase is an unusual antibiotic resistance kinase. Nat Commun, 7, 2016
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1JDE
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![BU of 1jde by Molmil](/molmil-images/mine/1jde) | K22A mutant of pyruvate, phosphate dikinase | Descriptor: | PYRUVATE, PHOSPHATE DIKINASE, SULFATE ION | Authors: | Ye, D, Wei, M, McGuire, M, Huang, K, Kapadia, G, Herzberg, O, Martin, B.M, Dunaway-Mariano, D. | Deposit date: | 2001-06-13 | Release date: | 2001-11-28 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | Investigation of the catalytic site within the ATP-grasp domain of Clostridium symbiosum pyruvate phosphate dikinase. J.Biol.Chem., 276, 2001
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1KBL
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![BU of 1kbl by Molmil](/molmil-images/mine/1kbl) | PYRUVATE PHOSPHATE DIKINASE | Descriptor: | AMMONIUM ION, PYRUVATE PHOSPHATE DIKINASE, SULFATE ION | Authors: | Herzberg, O, Chen, C.C, Liu, S. | Deposit date: | 2001-11-06 | Release date: | 2002-01-30 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis Biochemistry, 41, 2002
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5JVL
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![BU of 5jvl by Molmil](/molmil-images/mine/5jvl) | C4-type pyruvate phospate dikinase: nucleotide binding domain with bound ATP analogue | Descriptor: | 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-05-11 | Release date: | 2017-04-05 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase. Sci Rep, 7, 2017
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1KC7
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![BU of 1kc7 by Molmil](/molmil-images/mine/1kc7) | Pyruvate Phosphate Dikinase with Bound Mg-phosphonopyruvate | Descriptor: | MAGNESIUM ION, PHOSPHONOPYRUVATE, SULFATE ION, ... | Authors: | Chen, C.C, Howard, A, Herzberg, O. | Deposit date: | 2001-11-07 | Release date: | 2002-01-30 | Last modified: | 2023-08-16 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Pyruvate site of pyruvate phosphate dikinase: crystal structure of the enzyme-phosphonopyruvate complex, and mutant analysis Biochemistry, 41, 2002
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2OLS
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5JVJ
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![BU of 5jvj by Molmil](/molmil-images/mine/5jvj) | C4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer | Descriptor: | MAGNESIUM ION, PHOSPHOENOLPYRUVATE, Pyruvate, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-05-11 | Release date: | 2017-04-05 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.898 Å) | Cite: | Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase. Sci Rep, 7, 2017
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5JVN
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![BU of 5jvn by Molmil](/molmil-images/mine/5jvn) | C3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism | Descriptor: | 2'-Bromo-2'-deoxyadenosine 5'-[beta,gamma-imide]triphosphoric acid, MAGNESIUM ION, PHOSPHOENOLPYRUVATE, ... | Authors: | Minges, A, Hoeppner, A, Groth, G. | Deposit date: | 2016-05-11 | Release date: | 2017-04-05 | Last modified: | 2024-01-10 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Structural intermediates and directionality of the swiveling motion of Pyruvate Phosphate Dikinase. Sci Rep, 7, 2017
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2N5T
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![BU of 2n5t by Molmil](/molmil-images/mine/2n5t) | Ensemble solution structure of the phosphoenolpyruvate-Enzyme I complex from the bacterial phosphotransferase system | Descriptor: | Phosphoenolpyruvate-protein phosphotransferase | Authors: | Venditti, V, Schwieters, C.D, Grishaev, A, Clore, G. | Deposit date: | 2015-07-28 | Release date: | 2015-09-02 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR, SOLUTION SCATTERING | Cite: | Dynamic equilibrium between closed and partially closed states of the bacterial Enzyme I unveiled by solution NMR and X-ray scattering. Proc.Natl.Acad.Sci.USA, 112, 2015
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2HRO
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![BU of 2hro by Molmil](/molmil-images/mine/2hro) | Structure of the full-lenght Enzyme I of the PTS system from Staphylococcus carnosus | Descriptor: | Phosphoenolpyruvate-protein phosphotransferase, SULFATE ION | Authors: | Marquez, J.A, Reinelt, S, Koch, B, Engelman, R, Hengstenberg, W, Scheffzek, K. | Deposit date: | 2006-07-20 | Release date: | 2006-09-19 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Structure of the full-length enzyme I of the phosphoenolpyruvate-dependent sugar phosphotransferase system J.Biol.Chem., 281, 2006
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2KX9
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![BU of 2kx9 by Molmil](/molmil-images/mine/2kx9) | Solution Structure of the Enzyme I dimer Using Residual Dipolar Couplings and Small Angle X-Ray Scattering | Descriptor: | Phosphoenolpyruvate-protein phosphotransferase | Authors: | Schwieters, C.D, Suh, J, Grishaev, A, Takayama, Y, Guirlando, R, Clore, G. | Deposit date: | 2010-04-29 | Release date: | 2010-09-15 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR, SOLUTION SCATTERING | Cite: | Solution structure of the 128 kDa enzyme I dimer from Escherichia coli and its 146 kDa complex with HPr using residual dipolar couplings and small- and wide-angle X-ray scattering. J.Am.Chem.Soc., 132, 2010
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2HWG
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![BU of 2hwg by Molmil](/molmil-images/mine/2hwg) | Structure of phosphorylated Enzyme I of the phosphoenolpyruvate:sugar phosphotransferase system | Descriptor: | MAGNESIUM ION, OXALATE ION, Phosphoenolpyruvate-protein phosphotransferase | Authors: | Lim, K, Teplyakov, A, Herzberg, O. | Deposit date: | 2006-08-01 | Release date: | 2006-11-14 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Structure of phosphorylated enzyme I, the phosphoenolpyruvate:sugar phosphotransferase system sugar translocation signal protein. Proc.Natl.Acad.Sci.Usa, 103, 2006
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