Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 499 results

7DLH
DownloadVisualize
BU of 7dlh by Molmil
Crystallization of Cationic Peroxidase from Proso Millet and Identification of Its Phosphatase Active Sites
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
Authors:Cui, x.d, Wang, t.f, Wang, k.
Deposit date:2020-11-27
Release date:2021-12-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.789 Å)
Cite:Crystallization of Cationic Peroxidase from Proso Millet and Identification of Its Phosphatase Active Sites
To Be Published
7S10
DownloadVisualize
BU of 7s10 by Molmil
Crystal Structure of ascorbate peroxidase triple mutant: S160M, L203M, Q204M
Descriptor: L-ascorbate peroxidase, POTASSIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Poulos, T.L, Kim, J, Murarka, V.C.
Deposit date:2021-08-31
Release date:2022-09-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.40000689 Å)
Cite:Computational analysis of the tryptophan cation radical energetics in peroxidase Compound I.
J.Biol.Inorg.Chem., 27, 2022
6H08
DownloadVisualize
BU of 6h08 by Molmil
The crystal structure of engineered cytochrome c peroxidase from Saccharomyces cerevisiae with a His175Me-His proximal ligand substitution
Descriptor: COBALT (II) ION, Cytochrome c peroxidase, mitochondrial, ...
Authors:Ortmayer, M, Levy, C, Green, A.P.
Deposit date:2018-07-06
Release date:2020-02-12
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rewiring the "Push-Pull" Catalytic Machinery of a Heme Enzyme Using an Expanded Genetic Code.
Acs Catalysis, 10, 2020
6TAE
DownloadVisualize
BU of 6tae by Molmil
Neutron structure of ferric ascorbate peroxidase
Descriptor: Ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2019-10-29
Release date:2020-03-18
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
3HDL
DownloadVisualize
BU of 3hdl by Molmil
Crystal Structure of Highly Glycosylated Peroxidase from Royal Palm Tree
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Watanabe, L, Moura, P.R, Bleicher, L, Nascimento, A.S, Zamorano, L.S, Calvete, J.J, Bursakov, S, Roig, M.G, Shnyrov, V.L, Polikarpov, I.
Deposit date:2009-05-07
Release date:2009-11-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure and statistical coupling analysis of highly glycosylated peroxidase from royal palm tree (Roystonea regia).
J.Struct.Biol., 169, 2010
4USC
DownloadVisualize
BU of 4usc by Molmil
Crystal structure of peroxidase from palm tree Chamaerops excelsa
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Bernardes, A, Santos, J.C, Textor, L.C, Cuadrado, N.H, Kostetsky, E.Y, Roig, M.G, Muniz, J.R.C, Shnyrov, V.L, Polikarpov, I.
Deposit date:2014-07-07
Release date:2015-05-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure Analysis of Peroxidase from the Palm Tree Chamaerops Excelsa.
Biochimie, 111, 2015
7JZ6
DownloadVisualize
BU of 7jz6 by Molmil
The Cryo-EM structure of the Catalase-peroxidase from Escherichia coli
Descriptor: Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Su, C.-C.
Deposit date:2020-09-01
Release date:2021-01-20
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:A 'Build and Retrieve' methodology to simultaneously solve cryo-EM structures of membrane proteins.
Nat.Methods, 18, 2021
8U3P
DownloadVisualize
BU of 8u3p by Molmil
1.79 Angstrom resolution crystal structure of KatG from Mycobacterium tuberculosis with an MYW cofactor after heat incubation for 60 minutes
Descriptor: ACETATE ION, Catalase-peroxidase, GLYCEROL, ...
Authors:Liu, A, Li, J, Ran, D.
Deposit date:2023-09-08
Release date:2024-09-11
Last modified:2024-12-11
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Indole N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions.
Angew.Chem.Int.Ed.Engl., 63, 2024
6XV4
DownloadVisualize
BU of 6xv4 by Molmil
Neutron structure of ferric ascorbate peroxidase-ascorbate complex
Descriptor: ASCORBIC ACID, Ascorbate peroxidase, POTASSIUM ION, ...
Authors:Kwon, H, Basran, J, Devos, J.M, Schrader, T.E, Ostermann, A, Blakeley, M.P, Raven, E.L, Moody, P.C.E.
Deposit date:2020-01-21
Release date:2020-03-18
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.9 Å), X-RAY DIFFRACTION
Cite:Visualizing the protons in a metalloenzyme electron proton transfer pathway.
Proc.Natl.Acad.Sci.USA, 117, 2020
8CZP
DownloadVisualize
BU of 8czp by Molmil
2.25 angstrom resolution crystal structure of as-isolated KatG from Mycobacterium tuberculosis with an MYW cofactor
Descriptor: ACETATE ION, Catalase-peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Li, J, Liu, A.
Deposit date:2022-05-25
Release date:2023-12-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Indole-N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions.
Angew.Chem.Int.Ed.Engl., 2024
9H1M
DownloadVisualize
BU of 9h1m by Molmil
Recombinant ferric horseradish peroxidase C1A
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DIHYDROGENPHOSPHATE ION, ...
Authors:Nesa, M.L, Mandal, S.K, Toelzer, C, Humer, D, Moody, P.C.E, Berger, I, Spadiut, O, Raven, E.L.
Deposit date:2024-10-09
Release date:2025-03-19
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of ferric recombinant horseradish peroxidase.
J.Biol.Inorg.Chem., 30, 2025
2X08
DownloadVisualize
BU of 2x08 by Molmil
cytochrome c peroxidase: ascorbate bound to the engineered ascorbate binding site
Descriptor: ASCORBIC ACID, CYTOCHROME C PEROXIDASE, MITOCHONDRIAL, ...
Authors:Murphy, E.J, Metcalfe, C.L, Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2009-12-07
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Engineering the substrate specificity and reactivity of a heme protein: creation of an ascorbate binding site in cytochrome c peroxidase.
Biochemistry, 47, 2008
7A8Z
DownloadVisualize
BU of 7a8z by Molmil
Cryo-EM structure of T275P KatG from M. tuberculosis
Descriptor: Catalase-peroxidase
Authors:Blundell, T.L, Chaplin, A.K, Munir, A.
Deposit date:2020-08-31
Release date:2021-01-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Using cryo-EM to understand antimycobacterial resistance in the catalase-peroxidase (KatG) from Mycobacterium tuberculosis.
Structure, 29, 2021
7AA3
DownloadVisualize
BU of 7aa3 by Molmil
T275P after heme uptake from M. tuberculosis
Descriptor: Catalase-peroxidase
Authors:Blundell, T.L, Chaplin, A.K, Munir, A.
Deposit date:2020-09-03
Release date:2021-01-27
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Using cryo-EM to understand antimycobacterial resistance in the catalase-peroxidase (KatG) from Mycobacterium tuberculosis.
Structure, 29, 2021
7OPT
DownloadVisualize
BU of 7opt by Molmil
Crystal structure of Trypanosoma cruzi peroxidase
Descriptor: Ascorbate peroxidase, OXYGEN MOLECULE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L.
Deposit date:2021-06-01
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.
J.Biol.Chem., 298, 2022
7OQR
DownloadVisualize
BU of 7oqr by Molmil
Crystal structure of Trypanosoma cruzi peroxidase
Descriptor: ACETATE ION, Ascorbate peroxidase, GLYCEROL, ...
Authors:Freeman, S.L, Kwon, H, Skafar, V, Fielding, A.J, Martinez, A, Piacenza, L, Radi, R, Raven, E.L.
Deposit date:2021-06-04
Release date:2022-06-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Crystal structure of Trypanosoma cruzi heme peroxidase and characterization of its substrate specificity and compound I intermediate.
J.Biol.Chem., 298, 2022
2X07
DownloadVisualize
BU of 2x07 by Molmil
cytochrome c peroxidase: engineered ascorbate binding site
Descriptor: Cytochrome c peroxidase, mitochondrial, PROTOPORPHYRIN IX CONTAINING FE
Authors:Murphy, E.J, Metcalfe, C.L, Gumiero, A, Raven, E.L, Moody, P.C.E.
Deposit date:2009-12-07
Release date:2010-11-10
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Engineering the substrate specificity and reactivity of a heme protein: creation of an ascorbate binding site in cytochrome c peroxidase.
Biochemistry, 47, 2008
5JHX
DownloadVisualize
BU of 5jhx by Molmil
Crystal Structure of Fungal MagKatG2 at pH 3.0
Descriptor: CITRATE ANION, Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gasselhuber, B, Obinger, C, Carpena, X.
Deposit date:2016-04-21
Release date:2016-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Interaction with the Redox Cofactor MYW and Functional Role of a Mobile Arginine in Eukaryotic Catalase-Peroxidase.
Biochemistry, 55, 2016
5JHY
DownloadVisualize
BU of 5jhy by Molmil
Crystal Structure of Fungal MagKatG2 at pH 5.5
Descriptor: Catalase-peroxidase 2, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gasselhuber, B, Obinger, C, Carpena, X.
Deposit date:2016-04-21
Release date:2016-06-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Interaction with the Redox Cofactor MYW and Functional Role of a Mobile Arginine in Eukaryotic Catalase-Peroxidase.
Biochemistry, 55, 2016
8W1W
DownloadVisualize
BU of 8w1w by Molmil
2.03 angstrom resolution crystal structure of as-isolated KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor
Descriptor: ACETATE ION, Catalase-peroxidase, GLYCEROL, ...
Authors:Liu, A, Li, J.
Deposit date:2024-02-19
Release date:2024-10-23
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:Indole N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions.
Angew.Chem.Int.Ed.Engl., 63, 2024
8W1X
DownloadVisualize
BU of 8w1x by Molmil
2.35-angstrom resolution intermediate crystal structure of KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor soaked with peroxide for 5 minutes
Descriptor: ACETATE ION, Catalase-peroxidase, GLYCEROL, ...
Authors:Liu, A, Li, J.
Deposit date:2024-02-19
Release date:2024-10-23
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Indole N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions.
Angew.Chem.Int.Ed.Engl., 63, 2024
8W1Y
DownloadVisualize
BU of 8w1y by Molmil
2.30 angstrom resolution intermediate crystal structure of KatG from Mycobacterium tuberculosis with an MYW-OOH cofactor soaked with peroxide for 1 minute
Descriptor: Catalase-peroxidase, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Li, J, Duan, R, Liu, A.
Deposit date:2024-02-19
Release date:2024-10-23
Last modified:2025-01-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Indole N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions.
Angew.Chem.Int.Ed.Engl., 63, 2024
6MPY
DownloadVisualize
BU of 6mpy by Molmil
B. pseudomallei KatG crystallized in the presence of benzoyl hydrazide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2018-10-09
Release date:2018-10-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:B. pseudomallei KatG crystallized in the presence of benzoyl hydrazide
To be published
6MQ0
DownloadVisualize
BU of 6mq0 by Molmil
B. pseudomallei KatG crystallized in the presence of furoyl hydrazide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2018-10-09
Release date:2018-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:B. pseudomallei KatG crystallized in the presence of furoyl hydrazide
To be published
6MQ1
DownloadVisualize
BU of 6mq1 by Molmil
B. pseudomallei KatG crystalized in the presence of ABTS
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, Catalase-peroxidase, ...
Authors:Loewen, P.C.
Deposit date:2018-10-09
Release date:2018-10-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:B. pseudomallei KatG crystalized in the presence of ABTS
To be published

237423

PDB entries from 2025-06-11

PDB statisticsPDBj update infoContact PDBjnumon