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PDB: 534 results

5BO5
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BU of 5bo5 by Molmil
Structure of a unique ATP synthase subunit NeqB from Nanoarcheaum equitans
Descriptor: MAGNESIUM ION, NEQ263, SULFATE ION
Authors:Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
Deposit date:2015-05-27
Release date:2015-09-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.808 Å)
Cite:Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
8W8D
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BU of 8w8d by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by Rof
Descriptor: Protein rof, Transcription termination factor Rho
Authors:Zhang, J, Wang, C.
Deposit date:2023-09-01
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program.
Nat Commun, 15, 2024
3DSR
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BU of 3dsr by Molmil
ADP in transition binding site in the subunit B of the energy converter A1Ao ATP synthase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase beta chain
Authors:Kumar, A, Manimekalai, S.M.S, Balakrishna, A.M, Gruber, G.
Deposit date:2008-07-14
Release date:2009-06-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the nucleotide-binding subunit B of the energy producer A1A0 ATP synthase in complex with adenosine diphosphate
Acta Crystallogr.,Sect.D, 64, 2008
4Q4L
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BU of 4q4l by Molmil
Crystal structure of an ATP synthase subunit beta 1 (F1-B1) from Burkholderia thailandensis
Descriptor: ATP synthase subunit beta 1, SODIUM ION
Authors:Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-04-14
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of an ATP synthase subunit beta 1 (F1-B1) from Burkholderia thailandensis
TO BE PUBLISHED
2V7Q
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BU of 2v7q by Molmil
The structure of F1-ATPase inhibited by I1-60HIS, a monomeric form of the inhibitor protein, IF1.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP SYNTHASE DELTA CHAIN, ...
Authors:Gledhill, J.R, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
Deposit date:2007-07-31
Release date:2007-09-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How the Regulatory Protein, If1, Inhibits F1- ATPase from Bovine Mitochondria.
Proc.Natl.Acad.Sci.USA, 104, 2007
1SKY
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BU of 1sky by Molmil
CRYSTAL STRUCTURE OF THE NUCLEOTIDE FREE ALPHA3BETA3 SUB-COMPLEX OF F1-ATPASE FROM THE THERMOPHILIC BACILLUS PS3
Descriptor: F1-ATPASE, SULFATE ION
Authors:Shirakihara, Y, Leslie, A.G.W, Abrahams, J.P, Walker, J.E, Ueda, T, Sekimoto, Y, Kambara, M, Saika, K, Kagawa, Y, Yoshida, M.
Deposit date:1997-02-26
Release date:1998-03-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The crystal structure of the nucleotide-free alpha 3 beta 3 subcomplex of F1-ATPase from the thermophilic Bacillus PS3 is a symmetric trimer.
Structure, 5, 1997
4NPH
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BU of 4nph by Molmil
Crystal structure of SsaN from Salmonella enterica
Descriptor: Probable secretion system apparatus ATP synthase SsaN
Authors:Sugiman-Marangos, S.N, Zhang, K, Cooper, C.A, Coombes, B.K, Junop, M.S.
Deposit date:2013-11-21
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of SsaN from Salmonella enterica
J.Biol.Chem., 2014
1JVA
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BU of 1jva by Molmil
CRYSTAL STRUCTURE OF THE VMA1-DERIVED ENDONUCLEASE BEARING THE N AND C EXTEIN PROPEPTIDES
Descriptor: VMA1-DERIVED HOMING ENDONUCLEASE X10SSS
Authors:Mizutani, R, Satow, Y.
Deposit date:2001-08-29
Release date:2002-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Protein-splicing reaction via a thiazolidine intermediate: crystal structure of the VMA1-derived endonuclease bearing the N and C-terminal propeptides.
J.Mol.Biol., 316, 2002
5CDF
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BU of 5cdf by Molmil
Structure at 2.3 A of the alpha/beta monomer of the F-ATPase from Paracoccus denitrificans
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta, GLYCEROL, ...
Authors:Morales-Rios, E, Montgomery, M.G, Leslie, A.G.W, Garcia-Trejo, J.J, Walker, J.E.
Deposit date:2015-07-03
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of a catalytic dimer of the alpha- and beta-subunits of the F-ATPase from Paracoccus denitrificans at 2.3 angstrom resolution.
Acta Crystallogr.,Sect.F, 71, 2015
4XD7
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BU of 4xd7 by Molmil
Structure of thermophilic F1-ATPase inhibited by epsilon subunit
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase epsilon chain, ATP synthase gamma chain, ...
Authors:SHIRAKIHARA, Y, SHIRATORI, A, TANIKAWA, H, NAKASAKO, M, YOSHIDA, M, SUZUKI, T.
Deposit date:2014-12-19
Release date:2015-08-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structure of a thermophilic F1 -ATPase inhibited by an epsilon-subunit: deeper insight into the epsilon-inhibition mechanism.
Febs J., 282, 2015
6FOC
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BU of 6foc by Molmil
F1-ATPase from Mycobacterium smegmatis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATP synthase epsilon chain, ATP synthase gamma chain, ...
Authors:Zhang, T, Montgomery, M.G, Leslie, A.G.W, Cook, G.M, Walker, J.E.
Deposit date:2018-02-06
Release date:2019-01-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (4 Å)
Cite:The structure of the catalytic domain of the ATP synthase fromMycobacterium smegmatisis a target for developing antitubercular drugs.
Proc.Natl.Acad.Sci.USA, 116, 2019
6VOH
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BU of 6voh by Molmil
Chloroplast ATP synthase (O1, CF1FO)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
Authors:Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L.
Deposit date:2020-01-30
Release date:2020-09-09
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (4.16 Å)
Cite:Structural basis of redox modulation on chloroplast ATP synthase.
Commun Biol, 3, 2020
2HLD
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BU of 2hld by Molmil
Crystal structure of yeast mitochondrial F1-ATPase
Descriptor: ATP synthase alpha chain, mitochondrial, ATP synthase beta chain, ...
Authors:Kabaleeswaran, V, Puri, N, Walker, J.E, Leslie, A.G, Mueller, D.M.
Deposit date:2006-07-06
Release date:2006-11-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Novel features of the rotary catalytic mechanism revealed in the structure of yeast F(1) ATPase.
Embo J., 25, 2006
6VQ8
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BU of 6vq8 by Molmil
Mammalian V-ATPase from rat brain - composite model of rotational state 3 bound to ADP and SidK (built from focused refinement models)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
6J5I
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BU of 6j5i by Molmil
Cryo-EM structure of the mammalian DP-state ATP synthase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit epsilon, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-11
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
5JJI
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BU of 5jji by Molmil
Rho transcription termination factor bound to rU7 and 6 ADP-BeF3 molecules
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, ...
Authors:Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
Deposit date:2016-04-24
Release date:2016-11-16
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5JJL
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BU of 5jjl by Molmil
Rho transcription termination factor bound to rU8 and 5 ADP-BeF3 molecules
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Thomsen, N.D, Lawson, M.R, Witkowsky, L.B, Qu, S, Berger, J.M.
Deposit date:2016-04-24
Release date:2016-11-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular mechanisms of substrate-controlled ring dynamics and substepping in a nucleic acid-dependent hexameric motor.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
2HT1
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BU of 2ht1 by Molmil
The closed ring structure of the Rho transcription termination factor in complex with nucleic acid in the motor domains
Descriptor: 5'-R(*UP*C)-3', 5'-R(*UP*CP*UP*CP*U)-3', SULFATE ION, ...
Authors:Skordalakes, E, Berger, J.M.
Deposit date:2006-07-24
Release date:2006-11-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Structural Insights into RNA-Dependent Ring Closure and ATPase Activation by the Rho Termination Factor.
Cell(Cambridge,Mass.), 127, 2006
6J5K
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BU of 6j5k by Molmil
Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F1 subunit alpha, ...
Authors:Gu, J, Zhang, L, Yi, J, Yang, M.
Deposit date:2019-01-11
Release date:2019-06-26
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Cryo-EM structure of the mammalian ATP synthase tetramer bound with inhibitory protein IF1.
Science, 364, 2019
4TT3
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BU of 4tt3 by Molmil
The Pathway of Binding of the Intrinsically Disordered Mitochondrial Inhibitor Protein to F1-ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Bason, J.V, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
Deposit date:2014-06-19
Release date:2014-08-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to F1-ATPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
4TSF
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BU of 4tsf by Molmil
The Pathway of Binding of the Intrinsically Disordered Mitochondrial Inhibitor Protein to F1-ATPase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Bason, J.V, Montgomery, M.G, Leslie, A.G.W, Walker, J.E.
Deposit date:2014-06-18
Release date:2014-08-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Pathway of binding of the intrinsically disordered mitochondrial inhibitor protein to F1-ATPase.
Proc.Natl.Acad.Sci.USA, 111, 2014
1BMF
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BU of 1bmf by Molmil
BOVINE MITOCHONDRIAL F1-ATPASE
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BOVINE MITOCHONDRIAL F1-ATPASE, MAGNESIUM ION, ...
Authors:Abrahams, J.P, Leslie, A.G.W, Lutter, R, Walker, J.E.
Deposit date:1996-03-13
Release date:1996-12-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure at 2.8 A resolution of F1-ATPase from bovine heart mitochondria.
Nature, 370, 1994
8IGU
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BU of 8igu by Molmil
Hexameric Ring Complex of Engineered V1-ATPase: A3(De)3_empty
Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8IGW
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BU of 8igw by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 4 ADPs: A3(De)3_(ADP)3cat,1non-cat, Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP)3cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, V-type sodium ATPase catalytic subunit A, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8IGV
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BU of 8igv by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023

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