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PDB: 14 results

2NQB
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BU of 2nqb by Molmil
Drosophila Nucleosome Structure
Descriptor: Histone H2A, Histone H2B, Histone H3, ...
Authors:Luger, K, Chakravarthy, S.
Deposit date:2006-10-30
Release date:2007-09-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Comparative analysis of nucleosome structures from different species.
To be Published
2PYO
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Drosophila nucleosome core
Descriptor: CHLORIDE ION, DNA (147-MER), Histone H2A, ...
Authors:Clapier, C.R, Petosa, C, Mueller, C.W.
Deposit date:2007-05-16
Release date:2007-11-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structure of the Drosophila nucleosome core particle highlights evolutionary constraints on the H2A-H2B histone dimer.
Proteins, 71, 2007
8UX1
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BU of 8ux1 by Molmil
Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
Descriptor: 153-bp Widom 601 DNA forward strand, 153-bp Widom 601 DNA reverse strand, GTP-binding nuclear protein Ran, ...
Authors:Huang, S.K, Rubinstein, J.L, Kay, L.E.
Deposit date:2023-11-08
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of Ran bound to RCC1 and the nucleosome core particle
To Be Published
8PP7
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human RYBP-PRC1 bound to mononucleosome
Descriptor: DNA (215-mer), E3 ubiquitin-protein ligase RING2, Histone H2A, ...
Authors:Ciapponi, M, Benda, C, Mueller, J.
Deposit date:2023-07-06
Release date:2024-03-27
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (2.91 Å)
Cite:Structural basis of the histone ubiquitination read-write mechanism of RYBP-PRC1.
Nat.Struct.Mol.Biol., 31, 2024
6DZT
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BU of 6dzt by Molmil
Cryo-EM structure of nucleosome in complex with a single chain antibody fragment
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Yadav, K.N.S, Zhou, B.-R.
Deposit date:2018-07-05
Release date:2019-05-22
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Atomic resolution cryo-EM structure of a native-like CENP-A nucleosome aided by an antibody fragment.
Nat Commun, 10, 2019
8PP6
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human RYBP-PRC1 bound to H2AK118ub1 nucleosome
Descriptor: DNA (215-MER), Histone H2A, Histone H2B, ...
Authors:Ciapponi, M, Benda, C, Mueller, J.
Deposit date:2023-07-06
Release date:2024-04-03
Last modified:2024-07-31
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Structural basis of the histone ubiquitination read-write mechanism of RYBP-PRC1.
Nat.Struct.Mol.Biol., 31, 2024
4X23
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CRYSTAL STRUCTURE OF CENP-C IN COMPLEX WITH THE NUCLEOSOME CORE PARTICLE
Descriptor: CENP-C, DNA (147-MER), Histone H2A, ...
Authors:Jiang, J.S.
Deposit date:2014-11-25
Release date:2014-12-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:A conserved mechanism for centromeric nucleosome recognition by centromere protein CENP-C.
Science, 340, 2013
4QLC
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BU of 4qlc by Molmil
Crystal structure of chromatosome at 3.5 angstrom resolution
Descriptor: CITRIC ACID, DNA (167-mer), H5, ...
Authors:Jiang, J.S, Zhou, B.R, Xiao, T.S, Bai, Y.W.
Deposit date:2014-06-11
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.503 Å)
Cite:Structural Mechanisms of Nucleosome Recognition by Linker Histones.
Mol.Cell, 33 Suppl 1, 2015
7XYF
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BU of 7xyf by Molmil
Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+2 position of the nucleosome
Descriptor: ATP-dependent helicase fft3, DNA (167-MER), Histone H2A, ...
Authors:Nan, Z, Tao, J, Yangao, H.
Deposit date:2022-06-01
Release date:2023-12-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+2 position of the nucleosome (Class I Fft3-nucleosome complex)
To Be Published
6PWE
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BU of 6pwe by Molmil
Cryo-EM structure of nucleosome core particle
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Chittori, S, Subramaniam, S.
Deposit date:2019-07-22
Release date:2019-08-21
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Structure of the primed state of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome.
Nucleic Acids Res., 47, 2019
6PWF
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Cryo-EM structure of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome
Descriptor: DNA (147-MER), Histone H2A, Histone H2B, ...
Authors:Chittori, S, Subramaniam, S.
Deposit date:2019-07-22
Release date:2019-08-21
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Structure of the primed state of the ATPase domain of chromatin remodeling factor ISWI bound to the nucleosome.
Nucleic Acids Res., 47, 2019
7XYG
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Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome
Descriptor: ATP-dependent helicase fft3, DNA (167-MER), Histone H2A, ...
Authors:Nan, Z, Tao, J, Yangao, H.
Deposit date:2022-06-01
Release date:2023-12-06
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome (Class II Fft3-nucleosome complex)
To Be Published
5WCU
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BU of 5wcu by Molmil
Crystal structure of 167 bp nucleosome bound to the globular domain of linker histone H5
Descriptor: DNA (167-MER), Histone H2A, Histone H2B, ...
Authors:Jiang, J.S, Zhou, B.R.
Deposit date:2017-07-02
Release date:2018-10-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (5.53 Å)
Cite:Revisit of Reconstituted 30-nm Nucleosome Arrays Reveals an Ensemble of Dynamic Structures.
J. Mol. Biol., 430, 2018
7PJ1
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BU of 7pj1 by Molmil
Solution structure of isolated Drosophila histone H2A-H2B heterodimer
Descriptor: Histone H2A, Histone H2B
Authors:van Ingen, H, Zhang, H.
Deposit date:2021-08-23
Release date:2021-12-08
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Mapping the electrostatic potential of the nucleosome acidic patch.
Sci Rep, 11, 2021

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PDB entries from 2024-08-07

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