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PDB: 49 results

2H5C
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BU of 2h5c by Molmil
0.82A resolution crystal structure of alpha-lytic protease at pH 5
Descriptor: ALPHA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Fuhrmann, C.N, Daugherty, M.D, Agard, D.A.
Deposit date:2006-05-25
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.82 Å)
Cite:Subangstrom crystallography reveals that short ionic hydrogen bonds, and not a His-Asp low-barrier hydrogen bond, stabilize the transition state in serine protease catalysis
J.Am.Chem.Soc., 128, 2006
1SSX
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BU of 1ssx by Molmil
0.83A resolution crystal structure of alpha-lytic protease at pH 8
Descriptor: Alpha-lytic protease, GLYCEROL, SULFATE ION
Authors:Fuhrmann, C.N, Agard, D.A.
Deposit date:2004-03-24
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.83 Å)
Cite:The 0.83A Resolution Crystal Structure of alpha-Lytic Protease Reveals the Detailed Structure of the Active Site and Identifies a Source of Conformational Strain.
J.Mol.Biol., 338, 2004
2H5D
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BU of 2h5d by Molmil
0.9A resolution crystal structure of alpha-lytic protease complexed with a transition state analogue, MeOSuc-Ala-Ala-Pro-Val boronic acid
Descriptor: ALPHA-LYTIC PROTEASE, GLYCEROL, MEOSUC-ALA-ALA-PRO-ALA BORONIC ACID INHIBITOR, ...
Authors:Fuhrmann, C.N, Agard, D.A.
Deposit date:2006-05-25
Release date:2006-09-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Subangstrom crystallography reveals that short ionic hydrogen bonds, and not a His-Asp low-barrier hydrogen bond, stabilize the transition state in serine protease catalysis
J.Am.Chem.Soc., 128, 2006
3M7U
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BU of 3m7u by Molmil
Crystal Structure of Alpha-Lytic Protease SB1+2 R64A/E182Q Mutant
Descriptor: Alpha-lytic protease, SELF-PROTEOLYSIS PRODUCT (RESIDUES 184-187), SULFATE ION
Authors:Agard, D.A, Erciyas Bailey, F.P, Waddling, C.A.
Deposit date:2010-03-17
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Quantifying protein unfolding cooperativity with acid sensitive probes: Interdomain salt bridge contributions to unfolding cooperativity are combined efficiently in alpha-Lytic Protease
To be Published
3URD
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BU of 3urd by Molmil
T181A mutant of alpha-Lytic Protease
Descriptor: Alpha-lytic protease, GLYCEROL, SULFATE ION
Authors:Kelch, B.A, Agard, D.A.
Deposit date:2011-11-22
Release date:2012-05-23
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Functional modulation of a protein folding landscape via side-chain distortion.
Proc.Natl.Acad.Sci.USA, 109, 2012
3URC
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BU of 3urc by Molmil
T181G mutant of alpha-Lytic Protease
Descriptor: Alpha-lytic protease, GLYCEROL, SULFATE ION
Authors:Kelch, B.A, Agard, D.A.
Deposit date:2011-11-22
Release date:2012-05-23
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Functional modulation of a protein folding landscape via side-chain distortion.
Proc.Natl.Acad.Sci.USA, 109, 2012
1QRW
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BU of 1qrw by Molmil
CRYSTAL STRUCTURE OF AN ALPHA-LYTIC PROTEASE MUTANT WITH ACCELERATED FOLDING KINETICS, R102H/G134S, PH 8
Descriptor: ALHPA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Derman, A.I, Mau, T, Agard, D.A.
Deposit date:1999-06-16
Release date:1999-06-18
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease
To be Published, 1999
1QQ4
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BU of 1qq4 by Molmil
CRYSTAL STRUCTURE OF AN ALPHA-LYTIC PROTEASE MUTANT WITH ACCELERATED FOLDING KINETICS, R102H/G134S
Descriptor: ALPHA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Derman, A.I, Mau, T, Agard, D.A.
Deposit date:1999-06-10
Release date:1999-06-15
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease
To be Published, 1999
3QGJ
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BU of 3qgj by Molmil
1.3A Structure of alpha-Lytic Protease Bound to Ac-AlaAlaPro-Alanal
Descriptor: 1,2-ETHANEDIOL, Ac-AlaAlaPro-Alanal peptide, Alpha-lytic protease, ...
Authors:Everill, P, Meinke, G, Bohm, A, Bachovchin, W.
Deposit date:2011-01-24
Release date:2012-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Substrate Binding Defines Ser195 Position in the Catalytic Triad of Serine Proteases, Not His57 protonation
To be Published
3URE
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BU of 3ure by Molmil
Repack mutant (T181I, W199L, Q210I) of alpha-Lytic Protease
Descriptor: Alpha-lytic protease, SULFATE ION
Authors:Kelch, B.A, Agard, D.A.
Deposit date:2011-11-22
Release date:2012-05-23
Last modified:2012-07-18
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Functional modulation of a protein folding landscape via side-chain distortion.
Proc.Natl.Acad.Sci.USA, 109, 2012
2ULL
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BU of 2ull by Molmil
MULTIPLE CONFORMATION STRUCTURE OF ALPHA-LYTIC PROTEASE AT 120 K
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Rader, S.D, Agard, D.A.
Deposit date:1996-11-26
Release date:1997-07-07
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution.
Protein Sci., 6, 1997
1TAL
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BU of 1tal by Molmil
ALPHA-LYTIC PROTEASE AT 120 K (SINGLE STRUCTURE MODEL)
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE
Authors:Rader, S.D, Agard, D.A.
Deposit date:1996-10-30
Release date:1997-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution.
Protein Sci., 6, 1997
3M7T
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BU of 3m7t by Molmil
Crystal Structure of Alpha-Lytic Protease SB2+3 E8A/R105S Mutant
Descriptor: Alpha-lytic protease, GLYCEROL, SULFATE ION
Authors:Agard, D.A, Erciyas Bailey, F.P, Waddling, C.A.
Deposit date:2010-03-17
Release date:2011-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Quantifying protein unfolding cooperativity with acid sensitive probes: Interdomain salt bridge contributions to unfolding cooperativity are combined efficiently in alpha-Lytic Protease
To be Published
1QRX
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BU of 1qrx by Molmil
CRYSTAL STRUCTURE OF WILD-TYPE ALPHA-LYTIC PROTEASE AT 1.6 A, PH 5.14
Descriptor: ALPHA-LYTIC PROTEASE, GLYCEROL, SULFATE ION
Authors:Derman, A.I, Mau, T, Agard, D.A.
Deposit date:1999-06-16
Release date:1999-06-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A Genetic Screen That Targets Specifically the Folding Transition State of Alpha-Lytic Protease
To be Published, 1999
2ALP
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BU of 2alp by Molmil
REFINED STRUCTURE OF ALPHA-LYTIC PROTEASE AT 1.7 ANGSTROMS RESOLUTION. ANALYSIS OF HYDROGEN BONDING AND SOLVENT STRUCTURE
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION
Authors:Fujinaga, M, Delbaere, L.T.J, Brayer, G.D, James, M.N.G.
Deposit date:1985-03-07
Release date:1985-07-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Refined structure of alpha-lytic protease at 1.7 A resolution. Analysis of hydrogen bonding and solvent structure.
J.Mol.Biol., 184, 1985
3PRO
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BU of 3pro by Molmil
ALPHA-LYTIC PROTEASE COMPLEXED WITH C-TERMINAL TRUNCATED PRO REGION
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, ALPHA-LYTIC PROTEASE
Authors:Sauter, N.K, Mau, T, Rader, S.D, Agard, D.A.
Deposit date:1998-08-26
Release date:1999-04-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of alpha-lytic protease complexed with its pro region.
Nat.Struct.Biol., 5, 1998
1P12
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BU of 1p12 by Molmil
CRYSTAL STRUCTURES OF ALPHA-LYTIC PROTEASE COMPLEXES WITH IRREVERSIBLY BOUND PHOSPHONATE ESTERS
Descriptor: ALPHA-LYTIC PROTEASE, PHOSPHONATE ESTER INHIBITOR, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1990-10-26
Release date:1993-01-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of alpha-lytic protease complexes with irreversibly bound phosphonate esters.
Biochemistry, 30, 1991
1P11
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BU of 1p11 by Molmil
CRYSTAL STRUCTURES OF ALPHA-LYTIC PROTEASE COMPLEXES WITH IRREVERSIBLY BOUND PHOSPHONATE ESTERS
Descriptor: ALPHA-LYTIC PROTEASE, PHOSPHONATE ESTER INHIBITOR A, PHOSPHONATE ESTER INHIBITOR B(TRANSITION STATE), ...
Authors:Bone, R, Agard, D.A.
Deposit date:1990-10-26
Release date:1993-01-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal structures of alpha-lytic protease complexes with irreversibly bound phosphonate esters.
Biochemistry, 30, 1991
1GBJ
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BU of 1gbj by Molmil
ALPHA-LYTIC PROTEASE WITH MET 190 REPLACED BY ALA
Descriptor: ALPHA-LYTIC PROTEASE, SULFATE ION
Authors:Mace, J.E, Agard, D.A.
Deposit date:1995-09-06
Release date:1996-01-29
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Kinetic and structural characterization of mutations of glycine 216 in alpha-lytic protease: a new target for engineering substrate specificity.
J.Mol.Biol., 254, 1995
1P02
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BU of 1p02 by Molmil
STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-ALANINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1989-04-24
Release date:1990-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates.
Biochemistry, 28, 1989
1P01
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BU of 1p01 by Molmil
Serine protease mechanism. structure of an inhibitory complex oF ALPHA-LYTIC Protease and a tightly bound peptide boronic acid
Descriptor: ALPHA-LYTIC PROTEASE, N-(tert-butoxycarbonyl)-L-alanyl-N-[(1R)-1-(dihydroxyboranyl)-2-methylpropyl]-L-prolinamide, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1989-04-24
Release date:1990-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Serine protease mechanism: structure of an inhibitory complex of alpha-lytic protease and a tightly bound peptide boronic acid.
Biochemistry, 26, 1987
7LPR
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BU of 7lpr by Molmil
STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-LEUCINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Fujishige, A, Bone, R, Agard, D.A.
Deposit date:1991-08-05
Release date:1993-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for broad specificity in alpha-lytic protease mutants.
Biochemistry, 30, 1991
6LPR
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BU of 6lpr by Molmil
STRUCTURAL BASIS FOR BROAD SPECIFICITY IN ALPHA-LYTIC PROTEASE MUTANTS
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-NORLEUCINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1991-08-05
Release date:1993-01-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for broad specificity in alpha-lytic protease mutants.
Biochemistry, 30, 1991
1P05
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BU of 1p05 by Molmil
STRUCTURE ANALYSIS OF SPECIFICITY. ALPHA-LYTIC PROTEASE COMPLEXES WITH ANALOGUES OF REACTION INTERMEDIATES
Descriptor: ALPHA-LYTIC PROTEASE, METHOXYSUCCINYL-ALA-ALA-PRO-NORLEUCINE BORONIC ACID INHIBITOR, SULFATE ION
Authors:Bone, R, Agard, D.A.
Deposit date:1989-04-24
Release date:1990-04-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural analysis of specificity: alpha-lytic protease complexes with analogues of reaction intermediates.
Biochemistry, 28, 1989
1BOQ
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BU of 1boq by Molmil
PRO REGION C-TERMINUS: PROTEASE ACTIVE SITE INTERACTIONS ARE CRITICAL IN CATALYZING THE FOLDING OF ALPHA-LYTIC PROTEASE
Descriptor: PROTEIN (ALPHA-LYTIC PROTEASE), SULFATE ION
Authors:Peters, R.J, Shiau, A.K, Sohl, J.L, Anderson, D.E, Tang, G, Silen, J.L, Agard, D.A.
Deposit date:1998-08-05
Release date:1998-08-12
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Pro region C-terminus:protease active site interactions are critical in catalyzing the folding of alpha-lytic protease.
Biochemistry, 37, 1998

 

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