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6IR4
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BU of 6ir4 by Molmil
Crystal structure of BioU from Synechocystis sp.PCC6803 (apo form)
Descriptor: Slr0355 protein
Authors:Sakaki, K, Oishi, K, Shimizu, T, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2018-11-10
Release date:2020-01-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6ITD
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BU of 6itd by Molmil
Crystal structure of BioU (K124A) from Synechocystis sp.PCC6803 in complex with the analog of reaction intermediate, 3-(1-aminoethyl)-nonanedioic acid
Descriptor: 3-(1-AMINOETHYL)NONANEDIOIC ACID, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Kuzuyama, T, Nishiyama, M.
Deposit date:2018-11-21
Release date:2020-01-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6K36
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BU of 6k36 by Molmil
Crystal structure of BioU from Synechocystis sp.PCC6803 conjugated with DAPA
Descriptor: (8S)-8-azanylnonanoic acid, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Nishiyama, M.
Deposit date:2019-05-16
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6K37
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BU of 6k37 by Molmil
Crystal structure of BioU (K124A) from Synechocystis sp.PCC6803 in complex with NAD+ and the analog of reaction intermediate, 3-(1-aminoethyl)-nonanedioic acid
Descriptor: (3R)-3-[(1R)-1-azanylethyl]nonanedioic acid, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Nishiyama, M.
Deposit date:2019-05-16
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
6K38
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BU of 6k38 by Molmil
Crystal structure of BioU (H233A) from Synechocystis sp.PCC6803 conjugated with DAPA
Descriptor: (8S)-8-azanylnonanoic acid, Slr0355 protein
Authors:Sakaki, K, Tomita, T, Nishiyama, M.
Deposit date:2019-05-16
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A suicide enzyme catalyzes multiple reactions for biotin biosynthesis in cyanobacteria.
Nat.Chem.Biol., 16, 2020
7VID
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BU of 7vid by Molmil
The crystal structure of L-leucine dehydrogenase from Pseudomonas aeruginosa
Descriptor: GLYCEROL, Leucine dehydrogenase
Authors:Kim, S, Kang, W, Yang, J.K.
Deposit date:2021-09-26
Release date:2022-06-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Crystal Structure of L-Leucine Dehydrogenase from Pseudomonas aeruginosa.
Mol.Cells, 45, 2022
1BXG
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BU of 1bxg by Molmil
PHENYLALANINE DEHYDROGENASE STRUCTURE IN TERNARY COMPLEX WITH NAD+ AND BETA-PHENYLPROPIONATE
Descriptor: HYDROCINNAMIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHENYLALANINE DEHYDROGENASE, ...
Authors:Vanhooke, J.L, Thoden, J.B, Brunhuber, N.M.W, Blanchard, J.L, Holden, H.M.
Deposit date:1998-10-02
Release date:1999-05-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Phenylalanine dehydrogenase from Rhodococcus sp. M4: high-resolution X-ray analyses of inhibitory ternary complexes reveal key features in the oxidative deamination mechanism.
Biochemistry, 38, 1999
4BHT
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BU of 4bht by Molmil
Structural Determinants of Cofactor Specificity and Domain Flexibility in Bacterial Glutamate Dehydrogenases
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, GLYCEROL, NADP-SPECIFIC GLUTAMATE DEHYDROGENASE, ...
Authors:Oliveira, T, Sharkey, M, Engel, P, Khan, A.
Deposit date:2013-04-06
Release date:2013-06-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of Nadp(+) -Dependent Glutamate Dehydrogenase from Escherichia Coli: Reflections on the Basis of Coenzyme Specificity in the Family of Glutamate Dehydrogenases.
FEBS J., 280, 2013
3VPX
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BU of 3vpx by Molmil
Crystal structure of leucine dehydrogenase from a psychrophilic bacterium Sporosarcina psychrophila.
Descriptor: Leucine dehydrogenase
Authors:Zhao, Y, Wakamatsu, T, Doi, K, Sakuraba, H, Ohshima, T.
Deposit date:2012-03-14
Release date:2013-02-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A psychrophilic leucine dehydrogenase from Sporosarcina psychrophila: Purification, characterization, gene sequencing and crystal structure analysis
J.MOL.CATAL., B ENZYM., 83, 2012
4XGI
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BU of 4xgi by Molmil
Crystal structure of Glutamate dehydrogenase from Burkholderia thailandensis
Descriptor: 1,2-ETHANEDIOL, 2-OXOGLUTARIC ACID, Glutamate dehydrogenase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2014-12-30
Release date:2015-01-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Glutamate dehydrogenase from Burkholderia thailandensis
to be published
2BMA
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BU of 2bma by Molmil
The crystal structure of Plasmodium falciparum glutamate dehydrogenase, a putative target for novel antimalarial drugs
Descriptor: GLUTAMATE DEHYDROGENASE (NADP+)
Authors:Werner, C, Stubbs, M.T, Krauth-Siege, R.L, Klebe, G.
Deposit date:2005-03-10
Release date:2005-05-19
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of Plasmodium Falciparum Glutamate Dehydrogenase, a Putative Target for Novel Antimalarial Drugs
J.Mol.Biol., 349, 2005
2TMG
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BU of 2tmg by Molmil
THERMOTOGA MARITIMA GLUTAMATE DEHYDROGENASE MUTANT S128R, T158E, N117R, S160E
Descriptor: PROTEIN (GLUTAMATE DEHYDROGENASE)
Authors:Knapp, S, Lebbink, J.H.G, van der Oost, J, de Vos, W.M, Rice, D, Ladenstein, R.
Deposit date:1998-12-04
Release date:1999-12-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Engineering activity and stability of Thermotoga maritima glutamate dehydrogenase. II: construction of a 16-residue ion-pair network at the subunit interface.
J.Mol.Biol., 289, 1999
4FHN
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BU of 4fhn by Molmil
Nup37-Nup120 full-length complex from Schizosaccharomyces pombe
Descriptor: Glutamate dehydrogenase, NUCLEOPORIN NUP37, Nucleoporin nup120
Authors:Bilokapic, S, Schwartz, T.U.
Deposit date:2012-06-06
Release date:2012-09-26
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (6.989 Å)
Cite:Molecular basis for Nup37 and ELY5/ELYS recruitment to the nuclear pore complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
8EW0
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BU of 8ew0 by Molmil
Cryo-EM structure of glutamate dehydrogenase frozen at various temperature
Descriptor: Glutamate dehydrogenase 1, mitochondrial
Authors:Shi, H, Wu, C, Zhang, X.
Deposit date:2022-10-21
Release date:2023-01-11
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Addressing compressive deformation of proteins embedded in crystalline ice.
Structure, 31, 2023
6DHL
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BU of 6dhl by Molmil
Bovine glutamate dehydrogenase complexed with epicatechin-3-gallate (ECG)
Descriptor: (2R,3S)-2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, Glutamate dehydrogenase 1, mitochondrial
Authors:Smith, T.J.
Deposit date:2018-05-20
Release date:2018-07-25
Method:X-RAY DIFFRACTION (3.624 Å)
Cite:Green tea polyphenols control dysregulated glutamate dehydrogenase in transgenic mice by hijacking the ADP activation site.
J. Biol. Chem., 286, 2011
5B37
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BU of 5b37 by Molmil
Crystal structure of L-tryptophan dehydrogenase from Nostoc punctiforme
Descriptor: Tryptophan dehydrogenase
Authors:Wakamatsu, T, Sakuraba, H, Kitamura, M, Hakumai, Y, Ohnishi, K, Ashiuchi, M, Ohshima, T.
Deposit date:2016-02-11
Release date:2016-11-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural Insights into l-Tryptophan Dehydrogenase from a Photoautotrophic Cyanobacterium, Nostoc punctiforme.
Appl. Environ. Microbiol., 83, 2017
4FCC
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BU of 4fcc by Molmil
Glutamate dehydrogenase from E. coli
Descriptor: Glutamate dehydrogenase
Authors:Bilokapic, S, Schwartz, T.U.
Deposit date:2012-05-24
Release date:2012-09-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular basis for Nup37 and ELY5/ELYS recruitment to the nuclear pore complex.
Proc.Natl.Acad.Sci.USA, 109, 2012
1V9L
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BU of 1v9l by Molmil
L-glutamate dehydrogenase from Pyrobaculum islandicum complexed with NAD
Descriptor: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glutamate dehydrogenase
Authors:Bhuiya, M.W, Sakuraba, H, Ohshima, T, Imagawa, T, Katunuma, N, Tsuge, H.
Deposit date:2004-01-26
Release date:2004-12-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The First Crystal Structure of Hyperthermostable NAD-dependent Glutamate Dehydrogenase from Pyrobaculum islandicum
J.Mol.Biol., 345, 2005
7F79
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BU of 7f79 by Molmil
Crystal structure of glutamate dehydrogenase 3 from Candida albicans in complex with alpha-ketoglutarate and NADPH
Descriptor: 2-OXOGLUTARIC ACID, GLYCEROL, Glutamate dehydrogenase, ...
Authors:Li, N, Wang, W, Zeng, X, Liu, M, Li, M, Li, C, Wang, M.
Deposit date:2021-06-28
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of glutamate dehydrogenase 3 from Candida albicans.
Biochem.Biophys.Res.Commun., 570, 2021
7F77
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BU of 7f77 by Molmil
Crystal structure of glutamate dehydrogenase 3 from Candida albicans
Descriptor: Glutamate dehydrogenase
Authors:Li, N, Wang, W, Zeng, X, Liu, M, Li, M, Li, C, Wang, M.
Deposit date:2021-06-28
Release date:2021-07-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.086 Å)
Cite:Crystal structure of glutamate dehydrogenase 3 from Candida albicans.
Biochem.Biophys.Res.Commun., 570, 2021
6YEH
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BU of 6yeh by Molmil
Arabidopsis thaliana glutamate dehydrogenase isoform 1 in apo form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Glutamate dehydrogenase 1, POTASSIUM ION
Authors:Ruszkowski, M, Grzechowiak, M, Jaskolski, M.
Deposit date:2020-03-24
Release date:2020-05-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Structural Studies of Glutamate Dehydrogenase (Isoform 1) FromArabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism.
Front Plant Sci, 11, 2020
6YEI
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BU of 6yei by Molmil
Arabidopsis thaliana glutamate dehydrogenase isoform 1 in complex with NAD
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, ...
Authors:Ruszkowski, M, Grzechowiak, M, Jaskolski, M.
Deposit date:2020-03-24
Release date:2020-05-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural Studies of Glutamate Dehydrogenase (Isoform 1) FromArabidopsis thaliana, an Important Enzyme at the Branch-Point Between Carbon and Nitrogen Metabolism.
Front Plant Sci, 11, 2020
5IJZ
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BU of 5ijz by Molmil
Crystal structure of glutamate dehydrogenase(GDH) from Corynebacterium glutamicum
Descriptor: 2-OXOGLUTARIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, NADP-specific glutamate dehydrogenase
Authors:Son, H.-F, Kim, K.-J.
Deposit date:2016-03-03
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural insights into domain movement and cofactor specificity of glutamate dehydrogenase from Corynebacterium glutamicum
BIOCHEM.BIOPHYS.RES.COMMUN., 459, 2015
8SK8
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BU of 8sk8 by Molmil
human liver mitochondrial Glutamate dehydrogenase 1
Descriptor: Glutamate dehydrogenase 1, mitochondrial
Authors:Zhang, Z, Tringides, M.
Deposit date:2023-04-18
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:High-Resolution Structural Proteomics of Mitochondria Using the 'Build and Retrieve' Methodology.
Mol.Cell Proteomics, 22, 2023
3SBO
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BU of 3sbo by Molmil
Structure of E.coli GDH from native source
Descriptor: CHLORIDE ION, NADP-specific glutamate dehydrogenase
Authors:Gee, C.L, Zubieta, C, Echols, N, Totir, M.
Deposit date:2011-06-06
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.204 Å)
Cite:Macro-to-Micro Structural Proteomics: Native Source Proteins for High-Throughput Crystallization.
Plos One, 7, 2012

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數據於2024-10-16公開中

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