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8W8D
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BU of 8w8d by Molmil
Structural mechanism of inhibition of the Rho transcription termination factor by Rof
Descriptor: Protein rof, Transcription termination factor Rho
Authors:Zhang, J, Wang, C.
Deposit date:2023-09-01
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program.
Nat Commun, 15, 2024
8SPX
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BU of 8spx by Molmil
PS3 F1 Rotorless, high ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Sobti, M, Stewart, A.G.
Deposit date:2023-05-03
Release date:2024-01-24
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
8SPW
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BU of 8spw by Molmil
PS3 F1 Rotorless, low ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase subunit alpha, ...
Authors:Sobti, M, Stewart, A.G.
Deposit date:2023-05-03
Release date:2024-01-24
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
8SPV
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BU of 8spv by Molmil
PS3 F1 Rotorless, no ATP
Descriptor: ATP synthase subunit alpha, ATP synthase subunit beta
Authors:Sobti, M, Stewart, A.G.
Deposit date:2023-05-03
Release date:2024-01-24
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:The series of conformational states adopted by rotorless F 1 -ATPase during its hydrolysis cycle.
Structure, 32, 2024
8Q3Q
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BU of 8q3q by Molmil
Bacterial transcription termination factor Rho G152D mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-08-04
Release date:2023-09-27
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3P
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BU of 8q3p by Molmil
Bacterial transcription termination factor Rho G150D mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-08-04
Release date:2023-09-27
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3O
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BU of 8q3o by Molmil
Bacterial transcription termination factor Rho + pppGpp
Descriptor: MAGNESIUM ION, Transcription termination factor Rho, guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate)
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-08-04
Release date:2023-09-27
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8Q3N
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BU of 8q3n by Molmil
Bacterial transcription termination factor Rho + ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-08-04
Release date:2023-09-27
Last modified:2023-10-04
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Transcription termination factor rho polymerizes under stress.
Biorxiv, 2023
8PTP
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BU of 8ptp by Molmil
Structure of Rho pentamer in complex with Rof
Descriptor: Protein rof, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTO
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BU of 8pto by Molmil
Structure of Rho pentamer in complex with Rof and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Protein rof, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTN
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BU of 8ptn by Molmil
Structure of the transcription termination factor Rho in complex with Rof
Descriptor: Protein rof, Transcription termination factor Rho
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTM
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BU of 8ptm by Molmil
Structure of the transcription termination factor Rho in complex with Rof and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Protein rof, ...
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8PTG
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BU of 8ptg by Molmil
Structure of the transcription termination factor Rho bound to RNA at the PBS and SBS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Said, N, Hilal, T, Wahl, M.C.
Deposit date:2023-07-14
Release date:2024-04-17
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Sm-like protein Rof inhibits transcription termination factor rho by binding site obstruction and conformational insulation.
Nat Commun, 15, 2024
8KI3
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BU of 8ki3 by Molmil
Structure of the human ATP synthase bound to bedaquiline (composite)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase F(0) complex subunit B1, ...
Authors:Lai, Y, Zhang, Y, Gong, H.
Deposit date:2023-08-22
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
8JR0
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BU of 8jr0 by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with TBAJ-587
Descriptor: (1~{S},2~{S})-1-(6-bromanyl-2-methoxy-quinolin-3-yl)-2-(2,6-dimethoxypyridin-4-yl)-4-(dimethylamino)-1-(2-fluoranyl-3-methoxy-phenyl)butan-2-ol, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-06-15
Release date:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
8J0T
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BU of 8j0t by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in the apo-form
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-04-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
8J0S
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BU of 8j0s by Molmil
Cryo-EM structure of Mycobacterium tuberculosis ATP synthase in complex with bedaquiline(BDQ)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Zhang, Y, Lai, Y, Liu, F, Rao, Z, Gong, H.
Deposit date:2023-04-11
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structure of Mycobacterium tuberculosis ATP synthase
To Be Published
8IGW
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BU of 8igw by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 4 ADPs: A3(De)3_(ADP)3cat,1non-cat, Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP)3cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, V-type sodium ATPase catalytic subunit A, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8IGV
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BU of 8igv by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8IGU
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BU of 8igu by Molmil
Hexameric Ring Complex of Engineered V1-ATPase: A3(De)3_empty
Descriptor: V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8HSR
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BU of 8hsr by Molmil
Thermus thermophilus Rho-engaged RNAP elongation complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (31-MER), ...
Authors:Murayama, Y, Ehara, H, Sekine, S.
Deposit date:2022-12-20
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of the transcription termination factor Rho engagement with transcribing RNA polymerase from Thermus thermophilus.
Sci Adv, 9, 2023
8HSL
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BU of 8hsl by Molmil
Thermus thermophilus RNA polymerase bound with an inverted Rho hexamer
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA-directed RNA polymerase subunit alpha, ...
Authors:Murayama, Y, Ehara, H, Sekine, S.
Deposit date:2022-12-19
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structural basis of the transcription termination factor Rho engagement with transcribing RNA polymerase from Thermus thermophilus.
Sci Adv, 9, 2023
8HSJ
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BU of 8hsj by Molmil
Thermus thermophilus transcription termination factor Rho bound with ADP-BeF3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
Authors:Murayama, Y, Ehara, H, Sekine, S.
Deposit date:2022-12-19
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of the transcription termination factor Rho engagement with transcribing RNA polymerase from Thermus thermophilus.
Sci Adv, 9, 2023
8HHC
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BU of 8hhc by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,post-hyd',lowATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ...
Authors:Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
Deposit date:2022-11-16
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
8HHB
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BU of 8hhb by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3,step waiting,lowATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
Authors:Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
Deposit date:2022-11-16
Release date:2023-07-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published

221371

數據於2024-06-19公開中

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