Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GZC
DownloadVisualize
BU of 5gzc by Molmil
Crystal structure of Galectin-8 N-CRD with part of linker
Descriptor: GLYCEROL, Galectin-8, SODIUM ION
Authors:Su, J.Y, Si, Y.L.
Deposit date:2016-09-28
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.08 Å)
Cite:Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker.
Int J Mol Sci, 17, 2016
5GNE
DownloadVisualize
BU of 5gne by Molmil
Crystal structure of LapB from Legionella pneumophila
Descriptor: Leucine aminopeptidase, SULFATE ION, ZINC ION
Authors:Zhang, N, Ge, H.
Deposit date:2016-07-20
Release date:2017-08-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure and Biochemical Characterization of an Aminopeptidase LapB from Legionella pneumophila.
J. Agric. Food Chem., 65, 2017
5GZL
DownloadVisualize
BU of 5gzl by Molmil
Cyclodeaminase_PA
Descriptor: LYSINE, Lysine cyclodeaminase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Ying, H, Chen, K.
Deposit date:2016-09-29
Release date:2018-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cyclodeaminase_PA
To Be Published
6XPH
DownloadVisualize
BU of 6xph by Molmil
CutR dimer with domain swap
Descriptor: Ethanolamine utilization protein EutS, GLYCEROL, POTASSIUM ION, ...
Authors:Ochoa, J.M, Sawaya, M.R, Nguyen, V.N, Duilio, C, Yeates, T.O, Nie, M.
Deposit date:2020-07-08
Release date:2020-07-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Symmetry breaking and structural polymorphism in a bacterial microcompartment shell protein for choline utilization.
Protein Sci., 29, 2020
3KVB
DownloadVisualize
BU of 3kvb by Molmil
Structure of KIAA1718 Jumonji domain in complex with N-oxalylglycine
Descriptor: JmjC domain-containing histone demethylation protein 1D, N-OXALYLGLYCINE, NICKEL (II) ION, ...
Authors:Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
Deposit date:2009-11-29
Release date:2009-12-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
5H00
DownloadVisualize
BU of 5h00 by Molmil
The crystal structure of D-2-haloacid dehalogenase
Descriptor: (R)-2-haloacid dehalogenase
Authors:Wang, Y, Xue, S.
Deposit date:2016-10-02
Release date:2017-10-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:The crystal structure of D-2-haloacid dehalogenase
To Be Published
6OME
DownloadVisualize
BU of 6ome by Molmil
Crystal structure of a probable cytosol aminopeptidase (Leucine aminopeptidase, LAP) from Chlamydia trachomatis D/UW-3/Cx
Descriptor: 1,2-ETHANEDIOL, CARBONATE ION, CHLORIDE ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-04-18
Release date:2019-05-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of a probable cytosol aminopeptidase (Leucine aminopeptidase, LAP) from Chlamydia trachomatis D/UW-3/Cx
To Be Published
5GNP
DownloadVisualize
BU of 5gnp by Molmil
Crystal structure of a Z-ring associated protein from Salmonella typhimurium
Descriptor: Cell division protein ZapD, MALONATE ION
Authors:Choi, H, Yoon, H.J, Lee, H.H.
Deposit date:2016-07-22
Release date:2017-07-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a Z-ring associated protein from Salmonella typhimurium
To Be Published
5H0H
DownloadVisualize
BU of 5h0h by Molmil
Crystal structure of HCK complexed with a pyrrolo-pyrimidine inhibitor (S)-2-(((1r,4S)-4-(4-amino-5-(4-phenoxyphenyl)-7H-pyrrolo[2,3-d]pyrimidin-7-yl)cyclohexyl)amino)-N,N,4-trimethylpentanamide
Descriptor: (2~{S})-2-[[4-[4-azanyl-5-(4-phenoxyphenyl)pyrrolo[2,3-d]pyrimidin-7-yl]cyclohexyl]amino]-~{N},~{N},4-trimethyl-pentanamide, Tyrosine-protein kinase HCK
Authors:Tomabechi, Y, Kukimoto-Niino, M, Shirouzu, M.
Deposit date:2016-10-04
Release date:2017-10-04
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Activity cliff for 7-substituted pyrrolo-pyrimidine inhibitors of HCK explained in terms of predicted basicity of the amine nitrogen.
Bioorg. Med. Chem., 25, 2017
3KQA
DownloadVisualize
BU of 3kqa by Molmil
MurA dead-end complex with terreic acid
Descriptor: (5S)-2,5-dihydroxy-3-methylcyclohex-2-ene-1,4-dione, CALCIUM ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Authors:Schonbrunn, E.
Deposit date:2009-11-17
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The fungal product terreic acid is a covalent inhibitor of the bacterial cell wall biosynthetic enzyme UDP-N-acetylglucosamine 1-carboxyvinyltransferase (MurA) .
Biochemistry, 49, 2010
5GNT
DownloadVisualize
BU of 5gnt by Molmil
BDLP-like folding of Mitofusin 1
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Mitofusin-1
Authors:Yan, L, Yu, C, Ming, Z, Rao, Z, Lou, Z, Hu, J.
Deposit date:2016-07-24
Release date:2016-11-23
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.665 Å)
Cite:the structure of mini-MFN1 in complex with GDP
To Be Published
5H10
DownloadVisualize
BU of 5h10 by Molmil
TRAF1-TANk complex
Descriptor: TNF receptor-associated factor 1, TRAF family member-associated NF-kappaB activator
Authors:Kim, C.M, Park, H.H.
Deposit date:2016-10-07
Release date:2017-10-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.205 Å)
Cite:TRAF1-TANk complex
To Be Published
5GOH
DownloadVisualize
BU of 5goh by Molmil
Lys33-linked di-ubiquitin
Descriptor: D-ubiquitin, Ubiquitin
Authors:Gao, S, Pan, M, Zheng, Y, Liu, L.
Deposit date:2016-07-27
Release date:2016-11-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Monomer/Oligomer Quasi-Racemic Protein Crystallography
J.Am.Chem.Soc., 138, 2016
3KR6
DownloadVisualize
BU of 3kr6 by Molmil
MurA dead-end complex with fosfomycin
Descriptor: UDP-N-acetylglucosamine 1-carboxyvinyltransferase, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE, [(1R)-1-hydroxypropyl]phosphonic acid
Authors:Schonbrunn, E.
Deposit date:2009-11-17
Release date:2010-04-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The fungal product terreic acid is a covalent inhibitor of the bacterial cell wall biosynthetic enzyme UDP-N-acetylglucosamine 1-carboxyvinyltransferase (MurA) .
Biochemistry, 49, 2010
5GOL
DownloadVisualize
BU of 5gol by Molmil
Structure of acetyl-Coenzyme A synthase Alpha subunit C-terminal domain F598H mutant
Descriptor: Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha, NICKEL (II) ION, SULFATE ION
Authors:Yuan, H, Wei, Y.Z, Tan, X.S.
Deposit date:2016-07-27
Release date:2017-09-06
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structure of acetyl-Coenzyme A synthase Alpha subunit C-terminal domain F598H mutant
To Be Published
6OMR
DownloadVisualize
BU of 6omr by Molmil
Crystal structure of PtmU3 complexed with PTN substrate
Descriptor: ACETATE ION, MANGANESE (II) ION, PtmU3, ...
Authors:Liu, Y.C, Dong, L.B, Shen, B.
Deposit date:2019-04-19
Release date:2019-07-24
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Characterization and Crystal Structure of a Nonheme Diiron Monooxygenase Involved in Platensimycin and Platencin Biosynthesis.
J.Am.Chem.Soc., 141, 2019
3KWC
DownloadVisualize
BU of 3kwc by Molmil
Oxidized, active structure of the beta-carboxysomal gamma-Carbonic Anhydrase, CcmM
Descriptor: CHLORIDE ION, Carbon dioxide concentrating mechanism protein, ISOPROPYL ALCOHOL, ...
Authors:Kimber, M.S, Castel, S.E, Pena, K.L.
Deposit date:2009-12-01
Release date:2010-02-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the oxidative activation of the carboxysomal {gamma}-carbonic anhydrase, CcmM.
Proc.Natl.Acad.Sci.USA, 107, 2010
5H1B
DownloadVisualize
BU of 5h1b by Molmil
Human RAD51 presynaptic complex
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), DNA repair protein RAD51 homolog 1, MAGNESIUM ION, ...
Authors:Xu, J, Zhao, L, Xu, Y, Zhao, W, Sung, P, Wang, H.W.
Deposit date:2016-10-08
Release date:2016-12-21
Last modified:2022-03-23
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Cryo-EM structures of human RAD51 recombinase filaments during catalysis of DNA-strand exchange
Nat. Struct. Mol. Biol., 24, 2017
5GOU
DownloadVisualize
BU of 5gou by Molmil
Structure of a 16-mer protein nanocage fabricated from its 24-mer analogue by subunit interface redesign
Descriptor: Ferritin heavy chain
Authors:Zhang, S, Zang, J, Wang, W, Wang, H, Zhao, G.
Deposit date:2016-07-29
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Conversion of the Native 24-mer Ferritin Nanocage into Its Non-Native 16-mer Analogue by Insertion of Extra Amino Acid Residues.
Angew. Chem. Int. Ed. Engl., 55, 2016
7SIT
DownloadVisualize
BU of 7sit by Molmil
Crystal structure of Voltage gated potassium ion channel, Kv 1.2 chimera-3m
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, OXYGEN ATOM, POTASSIUM ION, ...
Authors:Reddi, R, Matulef, K, Riederer, E.A, Whorton, M.R, Valiyaveetil, F.I.
Deposit date:2021-10-14
Release date:2022-05-04
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.32 Å)
Cite:Structural basis for C-type inactivation in a Shaker family voltage-gated K + channel.
Sci Adv, 8, 2022
3KXA
DownloadVisualize
BU of 3kxa by Molmil
Crystal Structure of NGO0477 from Neisseria gonorrhoeae
Descriptor: ASPARAGINE, CHLORIDE ION, Putative uncharacterized protein, ...
Authors:Ren, J, Sainsbury, S, Nettleship, J.E, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2009-12-02
Release date:2010-01-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif.
Proteins, 78, 2010
5H20
DownloadVisualize
BU of 5h20 by Molmil
X-ray structure of PadR-like Transcription factor from bacteroid fragilis
Descriptor: ISOPROPYL ALCOHOL, PHOSPHATE ION, Putative PadR-family transcriptional regulatory protein, ...
Authors:Lee, C, Hong, M.
Deposit date:2016-10-13
Release date:2017-03-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional analysis of BF2549, a PadR-like transcription factor from Bacteroides fragilis.
Biochem. Biophys. Res. Commun., 483, 2017
6X6H
DownloadVisualize
BU of 6x6h by Molmil
Structure of Shiga toxin 2 with a C-terminal peptide of ribosomal P stalk proteins
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CHLORIDE ION, ...
Authors:Rudolph, M.J.
Deposit date:2020-05-28
Release date:2020-09-09
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Structural basis for the interaction of Shiga toxin 2a with a C-terminal peptide of ribosomal P stalk proteins.
J.Biol.Chem., 295, 2020
5GPI
DownloadVisualize
BU of 5gpi by Molmil
Crystal Structures of Unlinked NS2B-NS3 Protease from Zika Virus and Its Complex with a Reverse Peptide Inhibitor
Descriptor: NS2B cofactor, NS3 protease
Authors:Phoo, W.W, Zhang, Z.Z.
Deposit date:2016-08-02
Release date:2016-12-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.578 Å)
Cite:Crystal structure of unlinked NS2B-NS3 protease from Zika virus
Science, 354, 2016
5GQG
DownloadVisualize
BU of 5gqg by Molmil
Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex
Descriptor: CALCIUM ION, Lacto-N-biosidase, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose
Authors:Yamada, C, Arakawa, T, Katayama, T, Fushinobu, S.
Deposit date:2016-08-07
Release date:2017-04-19
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Insight into Evolution of Symbiosis between Breast-Fed Infants and a Member of the Human Gut Microbiome Bifidobacterium longum
Cell Chem Biol, 24, 2017

224004

數據於2024-08-21公開中

PDB statisticsPDBj update infoContact PDBjnumon