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8BU5
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BU of 8bu5 by Molmil
Structure of DDB1 bound to SR-4835-engaged CDK12-cyclin K
Descriptor: CITRIC ACID, Cyclin-K, Cyclin-dependent kinase 12, ...
Authors:Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (3.134 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUS
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BU of 8bus by Molmil
Structure of DDB1 bound to DS59-engaged CDK12-cyclin K
Descriptor: 1,3-dimethyl-5-[[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]methyl]pyrazole-4-sulfonamide, Cyclin-K, Cyclin-dependent kinase 12, ...
Authors:Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.26 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUH
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BU of 8buh by Molmil
Structure of DDB1 bound to WX3-engaged CDK12-cyclin K
Descriptor: 6-[[[2-[[(2~{R})-1-oxidanylbutan-2-yl]amino]-9-propan-2-yl-purin-6-yl]amino]methyl]-3-pyridin-2-yl-1~{H}-pyridin-2-one, Cyclin-K, Cyclin-dependent kinase 12, ...
Authors:Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUC
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BU of 8buc by Molmil
Structure of DDB1 bound to dCeMM3-engaged CDK12-cyclin K
Descriptor: 2-(1~{H}-benzimidazol-2-ylsulfanyl)-~{N}-(5-chloranylpyridin-2-yl)ethanamide, CITRIC ACID, Cyclin-K, ...
Authors:Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.85 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
1N1K
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BU of 1n1k by Molmil
NMR Structure for d(CCGCGG)2
Descriptor: 5'-D(P*CP*CP*GP*CP*GP*G)-3'
Authors:Monleon, D, Celda, B.
Deposit date:2002-10-18
Release date:2002-10-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR study of hexanucleotide d(CCGCGG)(2) containing two triplet repeats of fragile X syndrome.
Biochem.Biophys.Res.Commun., 303, 2003
8BUT
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BU of 8but by Molmil
Structure of DDB1 bound to DS61-engaged CDK12-cyclin K
Descriptor: 2-[[6-[[4-(2-hydroxyethyloxy)phenyl]methylamino]-9-propan-2-yl-purin-2-yl]amino]butan-1-ol, Cyclin-K, Cyclin-dependent kinase 12, ...
Authors:Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
5HEV
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BU of 5hev by Molmil
Crystal Structure of the beryllofluoride-activated LiaR from Enterococcus faecium
Descriptor: BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, Response regulator protein VraR
Authors:Davlieva, M, Shamoo, Y.
Deposit date:2016-01-06
Release date:2016-11-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.192 Å)
Cite:An Adaptive Mutation in Enterococcus faecium LiaR Associated with Antimicrobial Peptide Resistance Mimics Phosphorylation and Stabilizes LiaR in an Activated State.
J.Mol.Biol., 428, 2016
8BUD
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BU of 8bud by Molmil
Structure of DDB1 bound to Z7-engaged CDK12-cyclin K
Descriptor: Cyclin-K, Cyclin-dependent kinase 12, DNA damage-binding protein 1, ...
Authors:Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUE
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BU of 8bue by Molmil
Structure of DDB1 bound to Z11-engaged CDK12-cyclin K
Descriptor: Cyclin-K, Cyclin-dependent kinase 12, DNA damage-binding protein 1, ...
Authors:Kozicka, Z, Kempf, G, Petzold, G, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8BUG
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BU of 8bug by Molmil
Structure of DDB1 bound to HQ461-engaged CDK12-cyclin K
Descriptor: 2-[2-[(6-methylpyridin-2-yl)amino]-1,3-thiazol-4-yl]-~{N}-(5-methyl-1,3-thiazol-2-yl)ethanamide, CITRIC ACID, Cyclin-K, ...
Authors:Kozicka, Z, Kempf, G, Focht, V, Thoma, N.H.
Deposit date:2022-11-30
Release date:2023-09-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.53 Å)
Cite:Design principles for cyclin K molecular glue degraders.
Nat.Chem.Biol., 20, 2024
8OO3
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BU of 8oo3 by Molmil
X-ray structure of the adduct formed upon reaction of cisplatin with human angiogenin after 5 days soaking
Descriptor: AMMONIA, Angiogenin, D(-)-TARTARIC ACID, ...
Authors:Ferraro, G, Merlino, A.
Deposit date:2023-04-04
Release date:2023-07-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Cisplatin binding to angiogenin protein: new molecular pathways and targets for the drug's anticancer activity.
Dalton Trans, 52, 2023
7VBW
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BU of 7vbw by Molmil
Structure of the GTP-bound AAA+ ATPase domain of the transcriptional regulator GtrR in Burkholderia cenocepacia
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Sigma-54 dependent trancsriptional regulator
Authors:Yan, X.F, Yong, Y, Gao, Y.G.
Deposit date:2021-09-01
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analyses of the AAA+ ATPase domain of the transcriptional regulator GtrR in the BDSF quorum-sensing system in Burkholderia cenocepacia.
Febs Lett., 596, 2022
3DB3
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BU of 3db3 by Molmil
Crystal structure of the tandem tudor domains of the E3 ubiquitin-protein ligase UHRF1 in complex with trimethylated histone H3-K9 peptide
Descriptor: E3 ubiquitin-protein ligase UHRF1, Trimethylated histone H3-K9 peptide
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Dong, A, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2008-05-30
Release date:2008-09-16
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Recognition of multivalent histone states associated with heterochromatin by UHRF1 protein.
J.Biol.Chem., 286, 2011
7VBS
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BU of 7vbs by Molmil
Structure of the AAA+ ATPase domain of the transcriptional regulator GtrR in Burkholderia cenocepacia
Descriptor: PHOSPHATE ION, Sigma-54 dependent trancsriptional regulator
Authors:Yan, X.F, Yong, Y, Gao, Y.G.
Deposit date:2021-09-01
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:Structural analyses of the AAA+ ATPase domain of the transcriptional regulator GtrR in the BDSF quorum-sensing system in Burkholderia cenocepacia.
Febs Lett., 596, 2022
2JVV
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BU of 2jvv by Molmil
Solution Structure of E. coli NusG carboxyterminal domain
Descriptor: Transcription antitermination protein nusG
Authors:Schweimer, K, Scheckenhofer, U, Roesch, P.
Deposit date:2007-09-26
Release date:2008-10-14
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Two structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators.
J.Mol.Biol., 391, 2009
2HWT
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BU of 2hwt by Molmil
NMR solution structure of the Master-Rep protein nuclease domain (2-95) from the Faba Bean Necrotic Yellows Virus
Descriptor: Putative replicase-associated protein
Authors:Vega-Rocha, S, Gronenborn, B, Gronenborn, A.M, Campos-Olivas, R.
Deposit date:2006-08-02
Release date:2007-06-26
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of the endonuclease domain from the master replication initiator protein of the nanovirus faba bean necrotic yellows virus and comparison with the corresponding geminivirus and circovirus structures
Biochemistry, 46, 2007
3HO7
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BU of 3ho7 by Molmil
Crystal structure of OxyR from Porphyromonas gingivalis
Descriptor: OxyR
Authors:Svintradze, D.V, Wright, H.T, Lewis, J.P.
Deposit date:2009-06-01
Release date:2010-06-09
Last modified:2014-01-08
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structures of the Porphyromonas gingivalis OxyR regulatory domain explain differences in expression of the OxyR regulon in Escherichia coli and P. gingivalis.
Acta Crystallogr.,Sect.D, 69, 2013
5F4H
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BU of 5f4h by Molmil
Archael RuvB-like Holiday junction helicase
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Nucleotide binding protein PINc
Authors:Zhai, B, DuPrez, K.T, Doukov, T.I, Shen, Y, Fan, L.
Deposit date:2015-12-03
Release date:2016-12-21
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.699 Å)
Cite:Structure and Function of a Novel ATPase that Interacts with Holliday Junction Resolvase Hjc and Promotes Branch Migration.
J. Mol. Biol., 429, 2017
3NQU
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BU of 3nqu by Molmil
Crystal structure of partially trypsinized (CENP-A/H4)2 heterotetramer
Descriptor: Histone H3-like centromeric protein A, Histone H4, SULFATE ION
Authors:Sekulic, N, Black, B.E.
Deposit date:2010-06-29
Release date:2010-08-25
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of (CENP-A-H4)(2) reveals physical features that mark centromeres.
Nature, 467, 2010
7OF5
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BU of 7of5 by Molmil
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).
Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R.
Deposit date:2021-05-04
Release date:2021-06-09
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
Nat Commun, 12, 2021
2ING
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BU of 2ing by Molmil
X-ray Structure of the BRCA1 BRCT mutant M1775K
Descriptor: Breast cancer type 1 susceptibility protein, COBALT (II) ION, SULFATE ION
Authors:Birrane, G, Soni, A, Ladias, J.A.A.
Deposit date:2006-10-07
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Pathogenicity of the BRCA1 missense variant M1775K is determined by the disruption of the BRCT phosphopeptide-binding pocket: a multi-modal approach.
Eur.J.Hum.Genet., 16, 2008
7OF0
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BU of 7of0 by Molmil
Structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).
Descriptor: 16S ribosomal RNA, 39S ribosomal protein L10, mitochondrial, ...
Authors:Hillen, H.S, Lavdovskaia, E, Nadler, F, Hanitsch, E, Linden, A, Bohnsack, K.E, Urlaub, H, Richter-Dennerlein, R.
Deposit date:2021-05-04
Release date:2021-06-09
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling.
Nat Commun, 12, 2021
1ASV
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BU of 1asv by Molmil
Avian sarcoma virus integrase catalytic core domain
Descriptor: AVIAN SARCOMA VIRUS INTEGRASE
Authors:Bujacz, G, Jaskolski, M, Alexandratos, J, Wlodawer, A.
Deposit date:1995-08-25
Release date:1995-11-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-resolution structure of the catalytic domain of avian sarcoma virus integrase.
J.Mol.Biol., 253, 1995
8PK0
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BU of 8pk0 by Molmil
human mitoribosomal large subunit assembly intermediate 1 with GTPBP10-GTPBP7
Descriptor: 16S rRNA + pre-H68-71 segment, 39S ribosomal protein L10, mitochondrial, ...
Authors:Kummer, E, Nguyen, T.G, Ritter, C.
Deposit date:2023-06-23
Release date:2023-12-13
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Structural insights into the role of GTPBP10 in the RNA maturation of the mitoribosome.
Nat Commun, 14, 2023
5G2X
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BU of 5g2x by Molmil
Structure a of Group II Intron Complexed with its Reverse Transcriptase
Descriptor: 5'-R(*CP*AP*CP*AP*UP*CP*CP*AP*UP*AP*AP*CP)-3', GROUP II INTRON, GROUP II INTRON-ENCODED PROTEIN LTRA
Authors:Qu, G, Kaushal, P.S, Wang, J, Shigematsu, H, Piazza, C.L, Agrawal, R.K, Belfort, M, Wang, H.W.
Deposit date:2016-04-16
Release date:2016-05-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of a Group II Intron in Complex with its Reverse Transcriptase.
Nat.Struct.Mol.Biol., 23, 2016

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數據於2024-09-04公開中

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