Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4KKC
DownloadVisualize
BU of 4kkc by Molmil
Structure of the E148A mutant of CLC-ec1 deltaNC construct in 20mM Bromide
Descriptor: Fab, heavy chain, light chain, ...
Authors:Lim, H.-H, Miller, C.
Deposit date:2013-05-05
Release date:2013-08-21
Last modified:2013-12-04
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:Fluoride-dependent interruption of the transport cycle of a CLC Cl(-)/H(+) antiporter.
Nat.Chem.Biol., 9, 2013
3JWZ
DownloadVisualize
BU of 3jwz by Molmil
Structure of endothelial nitric oxide synthase heme domain complexed with N1-[(3' S,4' R)-4'-((6"-amino-4"-methylpyridin-2"-yl)methyl)pyrrolidin-3'-yl]-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, ACETATE ION, CACODYLIC ACID, ...
Authors:Delker, S.L, Li, H, Poulos, T.L.
Deposit date:2009-09-18
Release date:2010-05-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unexpected binding modes of nitric oxide synthase inhibitors effective in the prevention of a cerebral palsy phenotype in an animal model.
J.Am.Chem.Soc., 132, 2010
7LWV
DownloadVisualize
BU of 7lwv by Molmil
UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Gobeil, S, Acharya, P.
Deposit date:2021-03-01
Release date:2021-03-31
Last modified:2021-08-18
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity.
Science, 373, 2021
4KMZ
DownloadVisualize
BU of 4kmz by Molmil
Human folate receptor beta (FOLR2) in complex with the folate
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, FOLIC ACID, ...
Authors:Wibowo, A.S, Dann III, C.E.
Deposit date:2013-05-08
Release date:2013-08-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of human folate receptors reveal biological trafficking states and diversity in folate and antifolate recognition.
Proc.Natl.Acad.Sci.USA, 110, 2013
4I8P
DownloadVisualize
BU of 4i8p by Molmil
Crystal structure of aminoaldehyde dehydrogenase 1a from Zea mays (ZmAMADH1a)
Descriptor: 1,2-ETHANEDIOL, Aminoaldehyde dehydrogenase 1, DI(HYDROXYETHYL)ETHER, ...
Authors:Morera, S, Vigouroux, A, Kopecny, D.
Deposit date:2012-12-04
Release date:2013-02-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Plant ALDH10 family: identifying critical residues for substrate specificity and trapping a thiohemiacetal intermediate.
J.Biol.Chem., 288, 2013
3JYT
DownloadVisualize
BU of 3jyt by Molmil
K65R mutant HIV-1 reverse transcriptase cross-linked to DS-DNA and complexed with DATP as the incoming nucleotide substrate
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA (5'-D(*A*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*(DDG))-3'), DNA (5'-D(*A*TP*GP*GP*TP*CP*GP*GP*CP*GP*CP*CP*CP*GP*AP*AP*CP*AP*GP*GP*GP*AP*CP*TP*GP*TP*G)-3'), ...
Authors:Das, K, Arnold, E.
Deposit date:2009-09-22
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for the role of the K65r mutation in HIV-1 reverse transcriptase polymerization, excision antagonism, and tenofovir resistance.
J.Biol.Chem., 284, 2009
4I9E
DownloadVisualize
BU of 4i9e by Molmil
Crystal structure of Aspartyl phosphate phosphatase F from Bacillus subtilis
Descriptor: Response regulator aspartate phosphatase F, beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose
Authors:Marina, A, Gallego, F.
Deposit date:2012-12-05
Release date:2013-11-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of Rap phosphatase inhibition by Phr peptides
Plos Biol., 11, 2013
7BLZ
DownloadVisualize
BU of 7blz by Molmil
Red alga C.merolae Photosystem I
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol, (3R)-beta,beta-caroten-3-ol, ...
Authors:Nelson, N, Klaiman, D, Hippler, M.
Deposit date:2021-01-19
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Red alga C.merolae Photosystem I
To Be Published
6ZI9
DownloadVisualize
BU of 6zi9 by Molmil
Ultrafast Structural Response to Charge Redistribution Within a Photosynthetic Reaction Centre - 300 ps (b) structure
Descriptor: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
Authors:Baath, P, Dods, R, Braenden, G, Neutze, R.
Deposit date:2020-06-25
Release date:2020-12-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Ultrafast structural changes within a photosynthetic reaction centre.
Nature, 589, 2021
4IAR
DownloadVisualize
BU of 4iar by Molmil
Crystal structure of the chimeric protein of 5-HT1B-BRIL in complex with ergotamine (PSI Community Target)
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Chimera protein of human 5-hydroxytryptamine receptor 1B and E. Coli soluble cytochrome b562, Ergotamine
Authors:Wang, C, Jiang, Y, Ma, J, Wu, H, Wacker, D, Katritch, V, Han, G.W, Liu, W, Huang, X, Vardy, E, McCorvy, J.D, Gao, X, Zhou, E.X, Melcher, K, Zhang, C, Bai, F, Yang, H, Yang, L, Jiang, H, Roth, B.L, Cherezov, V, Stevens, R.C, Xu, H.E, GPCR Network (GPCR)
Deposit date:2012-12-07
Release date:2013-03-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for molecular recognition at serotonin receptors.
Science, 340, 2013
4KR4
DownloadVisualize
BU of 4kr4 by Molmil
Salmonella typhi OmpF complex with Ampicillin
Descriptor: (2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID, Outer membrane protein F
Authors:Madhuranayaki, T, Balasubramaniam, D, Krishnaswamy, S.
Deposit date:2013-05-16
Release date:2014-05-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Salmonella typhi OmpF complex with Ampicillin
To be published
3I3Q
DownloadVisualize
BU of 3i3q by Molmil
Crystal Structure of AlkB in complex with Mn(II) and 2-oxoglutarate
Descriptor: 2-OXOGLUTARIC ACID, Alpha-ketoglutarate-dependent dioxygenase alkB, MANGANESE (II) ION
Authors:Yu, B, Hunt, J.F.
Deposit date:2009-06-30
Release date:2009-08-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Enzymological and structural studies of the mechanism of promiscuous substrate recognition by the oxidative DNA repair enzyme AlkB.
Proc.Natl.Acad.Sci.USA, 106, 2009
4KCO
DownloadVisualize
BU of 4kco by Molmil
Structure of neuronal nitric oxide synthase heme domain in complex with N-(3-((ethyl(3-fluorophenethyl)amino)methyl)phenyl)thiophene-2-carboximidamide
Descriptor: 5,6,7,8-TETRAHYDROBIOPTERIN, BROMIDE ION, N-[3-({ethyl[2-(3-fluorophenyl)ethyl]amino}methyl)phenyl]thiophene-2-carboximidamide, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2013-04-24
Release date:2014-02-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Potent and Selective Double-Headed Thiophene-2-carboximidamide Inhibitors of Neuronal Nitric Oxide Synthase for the Treatment of Melanoma.
J.Med.Chem., 57, 2014
3HX9
DownloadVisualize
BU of 3hx9 by Molmil
Structure of heme-degrader, MhuD (Rv3592), from Mycobacterium tuberculosis with two hemes bound in its active site
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, Protein Rv3592
Authors:Chim, N, Nguyen, T.Q, Iniguez, A, Goulding, C.W.
Deposit date:2009-06-19
Release date:2009-12-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Unusual Diheme Conformation of the Heme-Degrading Protein from Mycobacterium tuberculosis
J.Mol.Biol., 395, 2009
4HW2
DownloadVisualize
BU of 4hw2 by Molmil
Discovery of potent Mcl-1 inhibitors using fragment-based methods and structure-based design
Descriptor: 1,2-ETHANEDIOL, 6-chloro-3-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1H-indole-2-carboxylic acid, Induced myeloid leukemia cell differentiation protein Mcl-1, ...
Authors:Zhao, B.
Deposit date:2012-11-07
Release date:2013-01-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of potent myeloid cell leukemia 1 (Mcl-1) inhibitors using fragment-based methods and structure-based design.
J.Med.Chem., 56, 2013
7LHB
DownloadVisualize
BU of 7lhb by Molmil
Crystal structure of Bcl-2 in complex with prodrug ABBV-167
Descriptor: Apoptosis regulator Bcl-2, Phosphoric acid mono-[5-(5-{4-[2-(4-chloro-phenyl)-4,4-dimethyl-cyclohex-1-enylmethyl]-piperazin-1-yl}-2-{3-nitro-4-[(tetrahydro-pyran-4-ylmethyl)-amino]-benzenesulfonylaminocarbonyl}-phenoxy)-pyrrolo[2,3-b]pyridin-7-ylmethyl] ester
Authors:Judge, R.A, Salem, A.H.
Deposit date:2021-01-21
Release date:2021-04-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.068 Å)
Cite:Expanding the Repertoire for "Large Small Molecules": Prodrug ABBV-167 Efficiently Converts to Venetoclax with Reduced Food Effect in Healthy Volunteers.
Mol.Cancer Ther., 20, 2021
6YTV
DownloadVisualize
BU of 6ytv by Molmil
Cryo-EM structure of decameric human CALHM6 in the presence of Ca2+
Descriptor: Calcium homeostasis modulator protein 6
Authors:Sawicka, M, Drozdzyk, K, Dutzler, R.
Deposit date:2020-04-24
Release date:2020-05-13
Last modified:2020-05-20
Method:ELECTRON MICROSCOPY (4.39 Å)
Cite:Cryo-EM structures and functional properties of CALHM channels of the human placenta.
Elife, 9, 2020
6YWE
DownloadVisualize
BU of 6ywe by Molmil
The structure of the mitoribosome from Neurospora crassa in the P/E tRNA bound state
Descriptor: 16S rRNA, 23S rRNA, 3-hydroxyisobutyryl-CoA hydrolase, ...
Authors:Amunts, A, Itoh, Y, Naschberger, A.
Deposit date:2020-04-29
Release date:2020-11-11
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Analysis of translating mitoribosome reveals functional characteristics of translation in mitochondria of fungi.
Nat Commun, 11, 2020
6Z1P
DownloadVisualize
BU of 6z1p by Molmil
Structure of the mitochondrial ribosome from Tetrahymena thermophila
Descriptor: 30S ribosomal protein S15, 30S ribosomal protein S16, 30S ribosomal protein S17, ...
Authors:Tobiasson, V, Amunts, A.
Deposit date:2020-05-14
Release date:2020-06-24
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation.
Elife, 9, 2020
3I2J
DownloadVisualize
BU of 3i2j by Molmil
Cocaine Esterase, wild type, without a ligand
Descriptor: CHLORIDE ION, Cocaine esterase, GLYCEROL, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
4M64
DownloadVisualize
BU of 4m64 by Molmil
3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium
Descriptor: Melibiose carrier protein
Authors:Ethayathulla, A.S, Guan, L.
Deposit date:2013-08-08
Release date:2014-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structure-based mechanism for Na(+)/melibiose symport by MelB.
Nat Commun, 5, 2014
3I58
DownloadVisualize
BU of 3i58 by Molmil
Crystal structure of an O-methyltransferase (NcsB1) from neocarzinostatin biosynthesis in complex with S-adenosyl-L-homocysteine (SAH) and 2-hydroxy-7-methoxy-5-methyl naphthoic acid (NA)
Descriptor: 2-hydroxy-7-methoxy-5-methyl naphthoic acid, GLYCEROL, O-methyltransferase, ...
Authors:Cooke, H.A, Bruner, S.D.
Deposit date:2009-07-03
Release date:2009-09-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Molecular basis of substrate promiscuity for the SAM-dependent O-methyltransferase NcsB1, involved in the biosynthesis of the enediyne antitumor antibiotic neocarzinostatin.
Biochemistry, 48, 2009
4MDH
DownloadVisualize
BU of 4mdh by Molmil
REFINED CRYSTAL STRUCTURE OF CYTOPLASMIC MALATE DEHYDROGENASE AT 2.5-ANGSTROMS RESOLUTION
Descriptor: CYTOPLASMIC MALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION
Authors:Birktoft, J.J, Banaszak, L.J.
Deposit date:1989-04-12
Release date:1989-04-19
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Refined crystal structure of cytoplasmic malate dehydrogenase at 2.5-A resolution.
Biochemistry, 28, 1989
3I2I
DownloadVisualize
BU of 3i2i by Molmil
Cocaine Esterase with mutation T172R, bound to DTT adduct
Descriptor: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL, CHLORIDE ION, Cocaine esterase, ...
Authors:Tesmer, J.J.G, Nance, M.R.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structural analysis of thermostabilizing mutations of cocaine esterase.
Protein Eng.Des.Sel., 23, 2010
4FIB
DownloadVisualize
BU of 4fib by Molmil
Crystal structure of the ydhK protein from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR518A.
Descriptor: Uncharacterized protein ydhK
Authors:Vorobiev, S, Abashidze, M, Seetharaman, J, Mao, M, Xiao, R, Maglaqui, M, Owens, L.A, Cunningham, K, Zhao, L, Everett, J.K, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-06-08
Release date:2012-06-20
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Crystal structure of the ydhK protein from Bacillus subtilis.
To be Published

223166

數據於2024-07-31公開中

PDB statisticsPDBj update infoContact PDBjnumon