PDB: 54296 resultsInfo pagesStatus searchChemie searchBIRD

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3NWA	Glycoprotein B from Herpes simplex virus type 1, W174R mutant, low-pH Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B, MESO-ERYTHRITOL Authors: Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E. Deposit date: 2010-07-09 Release date: 2010-12-01 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.2629 Å) Cite: Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1. J.Virol., 84, 2010
3NWF	Glycoprotein B from Herpes simplex virus type 1, low-pH Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein B, MESO-ERYTHRITOL, ... Authors: Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E. Deposit date: 2010-07-09 Release date: 2010-12-01 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1. J.Virol., 84, 2010
3NW8	Glycoprotein B from Herpes simplex virus type 1, Y179S mutant, high-pH Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... Authors: Stampfer, S.D, Lou, H, Cohen, G.H, Eisenberg, R.J, Heldwein, E.E. Deposit date: 2010-07-09 Release date: 2010-12-01 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.75915 Å) Cite: Structural basis of local, pH-dependent conformational changes in glycoprotein B from herpes simplex virus type 1. J.Virol., 84, 2010
3NYP	A bimolecular anti-parallel-stranded Oxytricha nova telomeric quadruplex in complex with a 3,6-disubstituted acridine ligand containing bis-3-fluoropyrrolidine end side chains Descriptor: 3,6-bis(3-(3'-(R)-fluoropyrrolindino)propionamido)acridine, 5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3', POTASSIUM ION Authors: Campbell, N.H, Neidle, S. Deposit date: 2010-07-15 Release date: 2010-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.179 Å) Cite: Fluorine in medicinal chemistry: beta-fluorination of peripheral pyrrolidines attached to acridine ligands affects their interactions with G-quadruplex DNA. Org.Biomol.Chem., 9, 2011
4V2L	Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 3.4 MGy, focused in disulfide bonds. Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ... Authors: Campos-Acevedo, A.A, Rudino-Pinera, E. Deposit date: 2014-10-10 Release date: 2015-01-14 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei. Molecules, 19, 2014
4V2M	Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 34 MGy, focused in disulfide bonds. Descriptor: ACETATE ION, GLYCEROL, SULFATE ION, ... Authors: Campos-Acevedo, A.A, Rudino-Pinera, E. Deposit date: 2014-10-10 Release date: 2015-01-14 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.841 Å) Cite: Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei. Molecules, 19, 2014
4V2N	Crystallographic structure of thioredoxin from Litopenaeus vannamei: Radiation damage effect at 85 MGy, focused in disulfide bonds Descriptor: ACETATE ION, SULFATE ION, THIOREDOXIN Authors: Campos-Acevedo, A.A, Rudino-Pinera, E. Deposit date: 2014-10-10 Release date: 2015-01-14 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystallographic Studies Evidencing the High Energy Tolerance to Disrupting the Interface Disulfide Bond of Thioredoxin 1 from White Leg Shrimp Litopenaeus Vannamei. Molecules, 19, 2014
6KV1	Structure of wild type closed form of peptidoglycan peptidase ZN SAD Descriptor: CITRIC ACID, Peptidase M23, ZINC ION Authors: Min, K.J, An, D.R, Yoon, H.J, Suh, S.W, Lee, H.H. Deposit date: 2019-09-03 Release date: 2020-01-15 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (1.722 Å) Cite: Peptidoglycan reshaping by a noncanonical peptidase for helical cell shape in Campylobacter jejuni. Nat Commun, 11, 2020
4DO2	Crystal Structure of the Rop protein mutant D30P/A31G at resolution 1.4 resolution. Descriptor: Regulatory protein rop Authors: Amprazi, M, Kapetaniou, E.G, Kokkinidis, M. Deposit date: 2012-02-09 Release date: 2013-02-13 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.401 Å) Cite: Structural plasticity of 4-alpha-helical bundles exemplified by the puzzle-like molecular assembly of the Rop protein. Proc.Natl.Acad.Sci.USA, 111, 2014
6P3E	Mobile loops and electrostatic interactions maintain the flexible lambda tail tube Descriptor: Tail tube protein Authors: Campbell, P, Duda, R.L, Nassur, J, Hendrix, R.W, Conway, J.F, Huet, A. Deposit date: 2019-05-23 Release date: 2019-11-27 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (5.4 Å) Cite: Mobile Loops and Electrostatic Interactions Maintain the Flexible Tail Tube of Bacteriophage Lambda. J.Mol.Biol., 432, 2020
7RXU	Crystal structure of Cj1090c Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Lipoprotein Authors: Kim, Y, Yeo, H.J. Deposit date: 2021-08-23 Release date: 2022-08-31 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal structure of Campylobacter jejuni lipoprotein Cj1090c. Proteins, 91, 2023
5BV6	PKG II's Carboxyl Terminal Cyclic Nucleotide Binding Domain (CNB-B) in a complex with cGMP Descriptor: ACETATE ION, CALCIUM ION, GUANOSINE-3',5'-MONOPHOSPHATE, ... Authors: Campbell, J.C, Reger, A.S, Huang, G.Y, Sankaran, B, Kim, J.J, Kim, C.W. Deposit date: 2015-06-04 Release date: 2016-01-20 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Structural Basis of Cyclic Nucleotide Selectivity in cGMP-dependent Protein Kinase II. J.Biol.Chem., 291, 2016
6Z4H	A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 2 in P21 space group Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... Authors: Amporndanai, K, Hasnain, S.S. Deposit date: 2020-05-25 Release date: 2020-09-16 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4L	A4V mutant of human SOD1 bound with 2-(pyridin-3-ylmethyl)benzoisoselenazolone derivative 9 in P21 space group Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... Authors: Amporndanai, K, Hasnain, S.S. Deposit date: 2020-05-25 Release date: 2020-09-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4G	A4V mutant of human SOD1 bound with ebselen in P21 space group Descriptor: ACETATE ION, CHLORIDE ION, N-phenyl-2-selanylbenzamide, ... Authors: Amporndanai, K, Hasnain, S.S. Deposit date: 2020-05-25 Release date: 2020-09-16 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6ELV	Recombinantly expressed C-terminal domain of MdPPO1 (Csole-domain) Descriptor: CALCIUM ION, CHLORIDE ION, Polyphenol oxidase, ... Authors: Kampatsikas, I, Bijelic, A, Pretzler, M, Rompel, A. Deposit date: 2017-09-29 Release date: 2019-03-20 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.05 Å) Cite: A Peptide-Induced Self-Cleavage Reaction Initiates the Activation of Tyrosinase. Angew.Chem.Int.Ed.Engl., 58, 2019
6Z3V	A4V mutant of human SOD1 bound with N-aryl benzoisoselenazolone derivative 13 in P21 space group Descriptor: 5-fluoranyl-~{N}-(3-morpholin-4-ylcarbonylphenyl)-2-selanyl-benzamide, SULFATE ION, Superoxide dismutase [Cu-Zn], ... Authors: Amporndanai, K, Hasnain, S.S. Deposit date: 2020-05-22 Release date: 2020-09-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.25 Å) Cite: Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4I	A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 3 in P21 space group Descriptor: ACETATE ION, SULFATE ION, Superoxide dismutase [Cu-Zn], ... Authors: Amporndanai, K, Hasnain, S.S. Deposit date: 2020-05-25 Release date: 2020-09-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6Z4O	A4V mutant of human SOD1 bound with benzyl benzoisoselenazolone derivative 1 in P21 space group Descriptor: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... Authors: Amporndanai, K, Hasnain, S.S. Deposit date: 2020-05-25 Release date: 2020-09-16 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis. Ebiomedicine, 59, 2020
6ELS	Structure of latent apple tyrosinase (MdPPO1) Descriptor: COPPER (II) ION, OXYGEN ATOM, Polyphenol oxidase, ... Authors: Kampatsikas, I, Bijelic, A, Pretzler, M, Rompel, A. Deposit date: 2017-09-29 Release date: 2019-03-20 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.346 Å) Cite: A Peptide-Induced Self-Cleavage Reaction Initiates the Activation of Tyrosinase. Angew.Chem.Int.Ed.Engl., 58, 2019
6ELT	C-terminal domain of MdPPO1 upon self-cleavage (Ccleaved-domain) Descriptor: CALCIUM ION, Polyphenol oxidase, chloroplastic Authors: Kampatsikas, I, Bijelic, A, Pretzler, M, Rompel, A. Deposit date: 2017-09-29 Release date: 2019-03-20 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.35 Å) Cite: A Peptide-Induced Self-Cleavage Reaction Initiates the Activation of Tyrosinase. Angew.Chem.Int.Ed.Engl., 58, 2019
6QX6	Structure of gtPebB-dihydrobiliverdin complex Descriptor: 15,16-DIHYDROBILIVERDIN, Ferredoxin bilin reductase plastid, PENTAETHYLENE GLYCOL, ... Authors: Sommerkamp, J.A, Hofmann, E. Deposit date: 2019-03-07 Release date: 2019-08-07 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Crystal structure of the first eukaryotic bilin reductaseGtPEBB reveals a flipped binding mode of dihydrobiliverdin. J.Biol.Chem., 294, 2019
6QWQ	Structure of gtPebB Descriptor: Ferredoxin bilin reductase plastid, SULFATE ION Authors: Sommerkamp, J.A, Hofmann, E. Deposit date: 2019-03-06 Release date: 2019-08-07 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structure of the first eukaryotic bilin reductaseGtPEBB reveals a flipped binding mode of dihydrobiliverdin. J.Biol.Chem., 294, 2019
5I22	Amphiphysin SH3 in complex with Chikungunya virus nsP3 peptide Descriptor: CHIKV nsP3 peptide, Myc box-dependent-interacting protein 1 Authors: Tossavainen, H, Aitio, O, Hellman, M, Saksela, K, Permi, P. Deposit date: 2016-02-04 Release date: 2016-06-15 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Structural Basis of the High Affinity Interaction between the Alphavirus Nonstructural Protein-3 (nsP3) and the SH3 Domain of Amphiphysin-2. J.Biol.Chem., 291, 2016
5IDF	Cryo-EM structure of GluA2/3 AMPA receptor heterotetramer (model II) Descriptor: Glutamate receptor 2, Glutamate receptor 3 Authors: Herguedas, B, Garcia-Nafria, J, Fernandez-Leiro, R, Greger, I.H. Deposit date: 2016-02-24 Release date: 2016-03-16 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (10.31 Å) Cite: Structure and organization of heteromeric AMPA-type glutamate receptors. Science, 352, 2016

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