PDB: 163 resultsInfo pagesStatus searchChemie searchBIRD

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6SF4	Apo form of the ribonucleotide reductase NrdB protein from Leeuwenhoekiella blandensis Descriptor: Ribonucleoside-diphosphate reductase, beta subunit 1 Authors: Hasan, M, Rozman Grinberg, I, Sjoberg, B.M, Logan, D.T. Deposit date: 2019-07-31 Release date: 2019-08-28 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Class Id ribonucleotide reductase utilizes a Mn2(IV,III) cofactor and undergoes large conformational changes on metal loading. J.Biol.Inorg.Chem., 24, 2019
3MJO	Small subunit (R2F) of native ribonucleotide reductase from Corynebacterium ammoniagenes Descriptor: MANGANESE (III) ION, Ribonucleotide reductase subunit R2F Authors: Ogata, H, Stolle, P, Stehr, M, Auling, G, Lubitz, W. Deposit date: 2010-04-13 Release date: 2010-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.36 Å) Cite: A Tyrosyl-Dimanganese Coupled Spin System is the Native Metalloradical Cofactor of the R2F Subunit of the Ribonucleotide Reductase of Corynebacterium ammoniagenes. J.Am.Chem.Soc., 132, 2010
6TQY	Crystal structure of ribonucleotide reductase NrdF L61G variant from Bacillus anthracis anaerobically soaked with Fe(II) and Mn(II) ions Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION Authors: Grave, K, Hogbom, M. Deposit date: 2019-12-17 Release date: 2020-04-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.77 Å) Cite: The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron. J.Biol.Inorg.Chem., 25, 2020
6TQW	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis anaerobically soaked with Fe(II) and Mn(II) ions Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION Authors: Grave, K, Hogbom, M. Deposit date: 2019-12-17 Release date: 2020-04-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.55 Å) Cite: The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron. J.Biol.Inorg.Chem., 25, 2020
6TQZ	Crystal structure of ribonucleotide reductase NrdF L61G variant from Bacillus anthracis aerobically soaked with Fe(II) and Mn(II) ions Descriptor: FE (II) ION, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ... Authors: Grave, K, Hogbom, M. Deposit date: 2019-12-17 Release date: 2020-04-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.099335 Å) Cite: The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron. J.Biol.Inorg.Chem., 25, 2020
6TQV	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis aerobically soaked with Fe(II) and Mn(II) ions Descriptor: MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION Authors: Grave, K, Hogbom, M. Deposit date: 2019-12-17 Release date: 2020-04-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.35000968 Å) Cite: The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron. J.Biol.Inorg.Chem., 25, 2020
6TQX	Crystal structure of apo (metal-free) ribonucleotide reductase NrdF L61G variant from Bacillus anthracis Descriptor: Ribonucleoside-diphosphate reductase subunit beta, SULFATE ION Authors: Grave, K, Hogbom, M. Deposit date: 2019-12-17 Release date: 2020-04-15 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.0500176 Å) Cite: The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron. J.Biol.Inorg.Chem., 25, 2020
3N37	Ribonucleotide Reductase Dimanganese(II)-NrdF from Escherichia coli Descriptor: GLYCEROL, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta Authors: Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C. Deposit date: 2010-05-19 Release date: 2010-08-18 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.65 Å) Cite: Structural basis for activation of class Ib ribonucleotide reductase. Science, 329, 2010
3N38	Ribonucleotide Reductase NrdF from Escherichia coli Soaked with Ferrous Ions Descriptor: FE (II) ION, Ribonucleoside-diphosphate reductase 2 subunit beta Authors: Boal, A.K, Cotruvo Jr, J.A, Stubbe, J, Rosenzweig, A.C. Deposit date: 2010-05-19 Release date: 2010-08-18 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural basis for activation of class Ib ribonucleotide reductase. Science, 329, 2010
3OLJ	Crystal structure of human ribonucleotide reductase subunit M2 (hRRM2) Descriptor: Ribonucleoside-diphosphate reductase subunit M2, SODIUM ION Authors: Chen, X.H, Xu, Z.J, Chen, B.E, Jiang, H.J, Yang, C.G, Zhu, W.L, Shao, J.M. Deposit date: 2010-08-26 Release date: 2011-08-31 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: hRRM2 To be Published
7MMV	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae with Cu(I) bound (Cu sulfate soak) Descriptor: CHLORIDE ION, COPPER (I) ION, GLYCEROL, ... Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.78 Å) Cite: Ribonucleotide Reductas To be published
7MMT	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae with Cu(I) bound (Cu chloride soak) Descriptor: CHLORIDE ION, COPPER (I) ION, GLYCEROL, ... Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.54 Å) Cite: Ribonucleotide Reductase To be published
7MMW	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae (in alternate conformation) Descriptor: CALCIUM ION, Ribonucleoside-diphosphate reductase Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.55 Å) Cite: Ribonucleotide Reductase To be published
7MMU	Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae with Cu(I) bound (Cu acetonitrile soak) Descriptor: CHLORIDE ION, COPPER (I) ION, Ribonucleoside-diphosphate reductase Authors: Palowitch, G.M, Boal, A.K. Deposit date: 2021-04-30 Release date: 2022-05-04 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.08 Å) Cite: Ribonucleotide Reductase To be published
5CI3	Ribonucleotide reductase Y122 2,3,5-F3Y variant Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit beta, SULFATE ION Authors: Funk, M.A, Drennan, C.L. Deposit date: 2015-07-10 Release date: 2016-07-13 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.401 Å) Cite: Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example. J.Am.Chem.Soc., 138, 2016
5CI2	Ribonucleotide reductase Y122 2,3,6-F3Y variant Descriptor: MU-OXO-DIIRON, Ribonucleoside-diphosphate reductase 1 subunit beta, SULFATE ION Authors: Funk, M.A, Drennan, C.L. Deposit date: 2015-07-10 Release date: 2016-06-22 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Biophysical Characterization of Fluorotyrosine Probes Site-Specifically Incorporated into Enzymes: E. coli Ribonucleotide Reductase As an Example. J.Am.Chem.Soc., 138, 2016
5DCS	R2-like ligand-binding oxidase with aerobically reconstituted Mn/Fe cofactor (long soak) Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2015-08-24 Release date: 2015-09-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.006 Å) Cite: Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor. J.Biol.Chem., 290, 2015
5DCO	R2-like ligand-binding oxidase with aerobically reconstituted diiron cofactor (short soak) Descriptor: FE (III) ION, PALMITIC ACID, Ribonucleotide reductase small subunit Authors: Griese, J.J, Hogbom, M. Deposit date: 2015-08-24 Release date: 2015-09-09 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.326 Å) Cite: Structural Basis for Oxygen Activation at a Heterodinuclear Manganese/Iron Cofactor. J.Biol.Chem., 290, 2015
6QK2	R2-like ligand-binding oxidase Y715F mutant with anaerobically reconstituted Mn/Fe cofactor Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-28 Release date: 2020-02-19 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.596 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QK0	R2-like ligand-binding oxidase E69D mutant with anaerobically reconstituted Mn/Fe cofactor Descriptor: FE (II) ION, MANGANESE (II) ION, PALMITIC ACID, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-28 Release date: 2020-02-19 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.091 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QJV	R2-like ligand-binding oxidase E69D mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-25 Release date: 2020-02-12 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.905 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QK1	R2-like ligand-binding oxidase Y175F mutant with aerobically reconstituted Mn/Fe cofactor Descriptor: FE (III) ION, MANGANESE (II) ION, MANGANESE (III) ION, ... Authors: Griese, J.J, Hogbom, M. Deposit date: 2019-01-28 Release date: 2020-02-19 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.754 Å) Cite: Key Structural Motifs Balance Metal Binding and Oxidative Reactivity in a Heterobimetallic Mn/Fe Protein. J.Am.Chem.Soc., 142, 2020
6QRZ	Crystal structure of R2-like ligand-binding oxidase from Sulfolobus acidocaldarius solved by 3D micro-crystal electron diffraction Descriptor: FE (III) ION, MANGANESE (III) ION, Ribonucleoside-diphosphate reductase Authors: Xu, H, Lebrette, H, Clabbers, M.T.B, Zhao, J, Griese, J.J, Zou, X, Hogbom, M. Deposit date: 2019-02-20 Release date: 2019-04-24 Last modified: 2024-05-15 Method: ELECTRON CRYSTALLOGRAPHY (3 Å) Cite: Solving a new R2lox protein structure by microcrystal electron diffraction. Sci Adv, 5, 2019
6QO8	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis anaerobically soaked with ferrous ions Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ... Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.31921768 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019
6QO9	Crystal structure of ribonucleotide reductase NrdF from Bacillus anthracis soaked with manganese ions Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MANGANESE (II) ION, Ribonucleoside-diphosphate reductase subunit beta, ... Authors: Grave, K, Hogbom, M. Deposit date: 2019-02-12 Release date: 2019-08-21 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.299 Å) Cite: Redox-induced structural changes in the di-iron and di-manganese forms of Bacillus anthracis ribonucleotide reductase subunit NrdF suggest a mechanism for gating of radical access. J.Biol.Inorg.Chem., 24, 2019

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