Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7QLM
DownloadVisualize
BU of 7qlm by Molmil
rsKiiro trans chromophore dark structure by SFX
Descriptor: rsKiiro
Authors:van Thor, J.J.
Deposit date:2021-12-20
Release date:2023-09-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
2G6E
DownloadVisualize
BU of 2g6e by Molmil
Structure of cyclized F64L S65A Y66S GFP variant
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P.
Deposit date:2006-02-24
Release date:2006-04-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
7S7Y
DownloadVisualize
BU of 7s7y by Molmil
Crystal structure of iCytSnFR Cytisine Sensor precursor binding protein
Descriptor: IMIDAZOLE, iNicSnFR 4.0 Fluorescent Nicotine Sensor precursor binding protein
Authors:Fan, C, Nichols, N.L, Luebbert, L, Looger, L.L, Lester, H.A, Rees, D.C.
Deposit date:2021-09-17
Release date:2021-10-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure, Function, and Application of Bacterial ABC Transporters
Ph.D.Thesis,California Institute of Technology, 2020
6MAS
DownloadVisualize
BU of 6mas by Molmil
X-ray Structure of Branchiostoma floridae fluorescent protein lanFP10G
Descriptor: GLYCEROL, Uncharacterized protein
Authors:Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
Deposit date:2018-08-28
Release date:2019-03-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue.
J. Mol. Biol., 431, 2019
3W1C
DownloadVisualize
BU of 3w1c by Molmil
Structure of a pressure sensitive YFP variant YFP-G1
Descriptor: Green Fluorescent protein
Authors:Imada, K, Yoshizawa, K, Kinoshita, M, Watanabe, T.M.
Deposit date:2012-11-14
Release date:2013-10-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Glycine insertion makes yellow fluorescent protein sensitive to hydrostatic pressure.
Plos One, 8, 2013
3SVB
DownloadVisualize
BU of 3svb by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: fluoride complex
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
Deposit date:2011-07-12
Release date:2012-07-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
6HB9
DownloadVisualize
BU of 6hb9 by Molmil
Crystal structure of the GABARAP in complex with the UBA5 LIR motif
Descriptor: Gamma-aminobutyric acid receptor-associated protein
Authors:Huber, J, Rogov, V, Akutsu, M.
Deposit date:2018-08-10
Release date:2019-05-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:An atypical LIR motif within UBA5 (ubiquitin like modifier activating enzyme 5) interacts with GABARAP proteins and mediates membrane localization of UBA5.
Autophagy, 16, 2020
2A50
DownloadVisualize
BU of 2a50 by Molmil
fluorescent protein asFP595, wt, off-state
Descriptor: GFP-like non-fluorescent chromoprotein FP595 chain 1, GFP-like non-fluorescent chromoprotein FP595 chain 2
Authors:Andresen, M, Wahl, M.C, Stiel, A.C, Graeter, F, Schaefer, L, Trowitzsch, S, Weber, G, Eggeling, C, Grubmueller, H, Hell, S.W, Jakobs, S.
Deposit date:2005-06-30
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure and mechanism of the reversible photoswitch of a fluorescent protein
Proc.Natl.Acad.Sci.Usa, 102, 2005
7QLO
DownloadVisualize
BU of 7qlo by Molmil
rsKiiro pump dump probe structure by TR-SFX
Descriptor: rsKiiro
Authors:van Thor, J.J.
Deposit date:2021-12-20
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
3ZTF
DownloadVisualize
BU of 3ztf by Molmil
X-ray Structure of the Cyan Fluorescent Protein mTurquoise2 (K206A mutant)
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
Deposit date:2011-07-07
Release date:2012-03-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
3SVC
DownloadVisualize
BU of 3svc by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: chloride complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Green fluorescent protein
Authors:Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
Deposit date:2011-07-12
Release date:2012-07-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Determination of engineered chloride-binding site structures in fluorescent proteins reveals principles of halide recognition
To be Published
3CB9
DownloadVisualize
BU of 3cb9 by Molmil
Development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Lohman, J.R.
Deposit date:2008-02-21
Release date:2008-08-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Biochemistry, 47, 2008
2QT2
DownloadVisualize
BU of 2qt2 by Molmil
Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-07-31
Release date:2009-04-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the Green Fluorescence Protein Fluorophore Biosynthesis Pathway
To be Published
3CD1
DownloadVisualize
BU of 3cd1 by Molmil
Development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Descriptor: Green fluorescent protein
Authors:Lohman, J.R.
Deposit date:2008-02-26
Release date:2008-08-19
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.312 Å)
Cite:Development of a family of redox-sensitive green fluorescent protein indicators for use in relatively oxidizing subcellular environments
Biochemistry, 47, 2008
7QLL
DownloadVisualize
BU of 7qll by Molmil
rsKiiro Thermal annealing at 290K of 200K Cis intermediate
Descriptor: GLYCEROL, SULFATE ION, rsKiiro
Authors:van Thor, J.J, Baxter, J.M.
Deposit date:2021-12-20
Release date:2023-07-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.324 Å)
Cite:Optical control of ultrafast structural dynamics in a fluorescent protein.
Nat.Chem., 15, 2023
4N3D
DownloadVisualize
BU of 4n3d by Molmil
Crystal structure of the dimeric variant EGFP-K162Q in P61 space group
Descriptor: GLYCEROL, Green fluorescent protein, PHOSPHATE ION, ...
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2013-10-07
Release date:2014-08-27
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Three dimensional structure of the dimeric gene-engineered variant of green fluorescent protein egfp-K162Q in P61 crystal space group
Rus.J.Bioorg.Chem., 40, 2014
2G3D
DownloadVisualize
BU of 2g3d by Molmil
Structure of S65G Y66A GFP variant after spontaneous peptide hydrolysis
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Barondeau, D.P.
Deposit date:2006-02-17
Release date:2006-04-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Understanding GFP Posttranslational Chemistry: Structures of Designed Variants that Achieve Backbone Fragmentation, Hydrolysis, and Decarboxylation.
J.Am.Chem.Soc., 128, 2006
7PCZ
DownloadVisualize
BU of 7pcz by Molmil
Functional and structural characterization of redox sensitive superfolder green fluorescent protein and variants
Descriptor: ETHANOL, GLYCEROL, Green fluorescent protein
Authors:Fritz-Wolf, K, Heimsch, K.C, Schuh, A.K, Becker, K.
Deposit date:2021-08-04
Release date:2022-02-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure and Function of Redox-Sensitive Superfolder Green Fluorescent Protein Variant.
Antioxid.Redox Signal., 37, 2022
6M9Y
DownloadVisualize
BU of 6m9y by Molmil
X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6A
Descriptor: Fluorescent protein lanFP6A
Authors:Muslinkina, L, Pletneva, N, Pletnev, V, Pletnev, S.
Deposit date:2018-08-24
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural Factors Enabling Successful GFP-Like Proteins with Alanine as the Third Chromophore-Forming Residue.
J. Mol. Biol., 431, 2019
1YJF
DownloadVisualize
BU of 1yjf by Molmil
Cyclized post-translational product for S65A Y66S (GFPhal) green fluorescent protein variant
Descriptor: Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-14
Release date:2005-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Understanding GFP Chromophore Biosynthesis: Controlling Backbone Cyclization and Modifying Post-translational Chemistry.
Biochemistry, 44, 2005
4DKN
DownloadVisualize
BU of 4dkn by Molmil
Crystal structure of amphioxus green fluorescent protein, GFPA1
Descriptor: AMPHIOXUS GREEN FLUORESCENT PROTEIN, GFPA1
Authors:Bomati, E.K, Deheyn, D.D.
Deposit date:2012-02-03
Release date:2013-05-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Fluorescent proteins in Amphioxus have strickingly different brightness, yet only few (but key) molecular differences
To be Published
2C9J
DownloadVisualize
BU of 2c9j by Molmil
Structure of the fluorescent protein cmFP512 at 1.35A from Cerianthus membranaceus
Descriptor: GREEN FLUORESCENT PROTEIN FP512
Authors:Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U.
Deposit date:2005-12-12
Release date:2006-10-30
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Exploring Chromophore-Protein Interactions in Fluorescent Protein Cmfp512 from Cerianthus Membranaceus: X-Ray Structure Analysis and Optical Spectroscopy.
Biochemistry, 45, 2006
4EUL
DownloadVisualize
BU of 4eul by Molmil
Crystal structure of enhanced Green Fluorescent Protein to 1.35A resolution reveals alternative conformations for Glu222
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ...
Authors:Jones, D.D, Arpino, J.A.J, Rizkallah, P.J.
Deposit date:2012-04-25
Release date:2012-10-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of enhanced green fluorescent protein to 1.35 a resolution reveals alternative conformations for glu222.
Plos One, 7, 2012
4RTC
DownloadVisualize
BU of 4rtc by Molmil
Crystal structure of the green fluorescent variant, nowGFP, of the cyan Cerulean at pH 9.0
Descriptor: GLYCEROL, nowGFP
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2014-11-14
Release date:2015-09-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the green fluorescent protein NowGFP with an anionic tryptophan-based chromophore.
Acta Crystallogr.,Sect.D, 71, 2015
1KYP
DownloadVisualize
BU of 1kyp by Molmil
Crystal Structure of an Apo Green Fluorescent Protein Zn Biosensor
Descriptor: Green Fluorescent Protein, MAGNESIUM ION
Authors:Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
Deposit date:2002-02-05
Release date:2002-04-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural chemistry of a green fluorescent protein Zn biosensor.
J.Am.Chem.Soc., 124, 2002

222415

數據於2024-07-10公開中

PDB statisticsPDBj update infoContact PDBjnumon