8RLD
 
 | | SPNS2:sfGFP hetero dimer assembled by Di-Gluebody - SPNS2 local refinement | | Descriptor: | DODECYL-BETA-D-MALTOSIDE, Sphingosine-1-phosphate transporter SPNS2 | | Authors: | Yi, G, Ye, M, Mamalis, D, Sauer, D.B, von Delft, F, Davis, B.G, Gilbert, R.J.C. | | Deposit date: | 2024-01-02 | | Release date: | 2025-01-15 | | Method: | ELECTRON MICROSCOPY (2.84 Å) | | Cite: | Di-Gluebodies: Rigid modular nanobody protein assemblies enabling simultaneous determination of high-resolution cryo-EM structures
To Be Published
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8RLA
 | | RECQL5:sfGFP hetero dimer assembled by Di-Gluebody - RECQL5 local refinement | | Descriptor: | ATP-dependent DNA helicase Q5, Gluebody G5-006, ZINC ION | | Authors: | Yi, G, Ye, M, Mamalis, D, Sauer, D.B, von Delft, F, Davis, B.G, Gilbert, R.J.C. | | Deposit date: | 2024-01-02 | | Release date: | 2025-01-15 | | Method: | ELECTRON MICROSCOPY (3.03 Å) | | Cite: | Di-Gluebodies: Rigid modular nanobody protein assemblies enabling simultaneous determination of high-resolution cryo-EM structures
To Be Published
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8HCO
 | | Substrate-engaged TOM complex from yeast | | Descriptor: | Mitochondrial import receptor subunit TOM22, Mitochondrial import receptor subunit TOM40, Mitochondrial import receptor subunit TOM5, ... | | Authors: | Zhou, X.Y, Yang, Y.Q, Wang, G.P, Wang, S.S. | | Deposit date: | 2022-11-02 | | Release date: | 2023-09-13 | | Last modified: | 2025-06-25 | | Method: | ELECTRON MICROSCOPY (4.1 Å) | | Cite: | Molecular pathway of mitochondrial preprotein import through the TOM-TIM23 supercomplex.
Nat.Struct.Mol.Biol., 30, 2023
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9C3E
 | | TCR - CD3 complex bound to HLA | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, Cancer/testis antigen 1,Beta-2-microglobulin,MHC class I antigen, ... | | Authors: | Notti, R.Q, Walz, T. | | Deposit date: | 2024-05-31 | | Release date: | 2024-10-02 | | Last modified: | 2024-10-16 | | Method: | ELECTRON MICROSCOPY (3.5 Å) | | Cite: | The resting and ligand-bound states of the membrane-embedded human T-cell receptor-CD3 complex.
Biorxiv, 2024
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8CPX
 | | Human apoferritin after 488 nm laser exposure in presence of rsEGFP2 | | Descriptor: | Ferritin heavy chain, N-terminally processed, MAGNESIUM ION, ... | | Authors: | Last, M.G.F, Noteborn, W.E.M, Sharp, T.H. | | Deposit date: | 2023-03-03 | | Release date: | 2023-03-15 | | Last modified: | 2023-11-22 | | Method: | ELECTRON MICROSCOPY (1.76 Å) | | Cite: | Super-resolution fluorescence imaging of cryosamples does not limit achievable resolution in cryoEM.
J.Struct.Biol., 215, 2023
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8CPW
 | | Human apoferritin after 405 nm + 488 nm laser exposure in presence of rsEGFP2 | | Descriptor: | Ferritin heavy chain, N-terminally processed, MAGNESIUM ION, ... | | Authors: | Last, M.G.F, Noteborn, W.E.M, Sharp, T.H. | | Deposit date: | 2023-03-03 | | Release date: | 2023-03-15 | | Last modified: | 2023-11-22 | | Method: | ELECTRON MICROSCOPY (1.79 Å) | | Cite: | Super-resolution fluorescence imaging of cryosamples does not limit achievable resolution in cryoEM.
J.Struct.Biol., 215, 2023
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8YH0
 | | A3R-Gi complex bound to NECA | | Descriptor: | Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2,Guanine nucleotide-binding protein G(i) subunit alpha-1, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, HA tag,Adenosine receptor A3,LgBiT,eGFP chimera, ... | | Authors: | Oshima, H.S, Shihoya, W, Nureki, O. | | Deposit date: | 2024-02-27 | | Release date: | 2024-11-06 | | Last modified: | 2024-11-27 | | Method: | ELECTRON MICROSCOPY (2.86 Å) | | Cite: | Structural insights into the agonist selectivity of the adenosine A 3 receptor.
Nat Commun, 15, 2024
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8U1U
 | | Structure of a class A GPCR/agonist complex | | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, C-C motif chemokine 1,C-C chemokine receptor type 8,EGFP fusion protein, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... | | Authors: | Sun, D, Johnson, M, Masureel, M. | | Deposit date: | 2023-09-02 | | Release date: | 2023-12-20 | | Last modified: | 2024-10-23 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Structural basis of antibody inhibition and chemokine activation of the human CC chemokine receptor 8.
Nat Commun, 14, 2023
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4TS2
 | | Crystal structure of the Spinach RNA aptamer in complex with DFHBI, magnesium ions | | Descriptor: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, POTASSIUM ION, ... | | Authors: | Warner, K.D, Chen, M.C, Song, W, Strack, R.L, Thorn, A, Jaffrey, S.R, Ferre-D'Amare, A.R. | | Deposit date: | 2014-06-18 | | Release date: | 2014-07-23 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.884 Å) | | Cite: | Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
Nat.Struct.Mol.Biol., 21, 2014
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4TS0
 | | Crystal structure of the Spinach RNA aptamer in complex with DFHBI, barium ions | | Descriptor: | (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2,3-dimethyl-3,5-dihydro-4H-imidazol-4-one, BARIUM ION, POTASSIUM ION, ... | | Authors: | Warner, K.D, Chen, M.C, Song, W, Strack, R.L, Thorn, A, Jaffrey, S.R, Ferre-D'Amare, A.R. | | Deposit date: | 2014-06-18 | | Release date: | 2014-07-23 | | Last modified: | 2023-12-27 | | Method: | X-RAY DIFFRACTION (2.8 Å) | | Cite: | Structural basis for activity of highly efficient RNA mimics of green fluorescent protein.
Nat.Struct.Mol.Biol., 21, 2014
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2IE2
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7SQZ
 | | CSDaV wild-type | | Descriptor: | Citrus Sudden Death-associated Virus Capsid Protein | | Authors: | Guo, F, Matsumura, E.E, Falk, B.W. | | Deposit date: | 2021-11-07 | | Release date: | 2022-05-25 | | Last modified: | 2024-06-05 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Citrus sudden death-associated virus as a new expression vector for rapid in planta production of heterologous proteins, chimeric virions, and virus-like particles.
Biotechnol Rep., 35, 2022
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3AI5
 | | Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein | | Descriptor: | 1,2-ETHANEDIOL, yeast enhanced green fluorescent protein,Ubiquitin | | Authors: | Suzuki, N, Wakatsuki, S, Kawasaki, M. | | Deposit date: | 2010-05-10 | | Release date: | 2010-09-29 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (1.4 Å) | | Cite: | Crystallization of small proteins assisted by green fluorescent protein
Acta Crystallogr.,Sect.D, 66, 2010
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8I4O
 | | Design of a split green fluorescent protein for sensing and tracking an beta-amyloid | | Descriptor: | Beta-amyloid, Split Green flourescent protein | | Authors: | Taegeun, Y, Jinsu, L, Jungmin, Y, Jungmin, C, Wondo, H, Song, J.J, Haksung, K. | | Deposit date: | 2023-01-20 | | Release date: | 2023-11-29 | | Last modified: | 2024-10-30 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Engineering of a Fluorescent Protein for a Sensing of an Intrinsically Disordered Protein through Transition in the Chromophore State.
Jacs Au, 3, 2023
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7UK4
 | | KS-AT di-domain of mycobacterial Pks13 with endogenous KS ligand bound | | Descriptor: | Polyketide synthase PKS13, UNKNOWN LIGAND | | Authors: | Kim, S.K, Dickinson, M.S, Finer-Moore, J.S, Rosenberg, O.S, Stroud, R.M. | | Deposit date: | 2022-03-31 | | Release date: | 2023-02-15 | | Last modified: | 2024-10-23 | | Method: | ELECTRON MICROSCOPY (1.94 Å) | | Cite: | Structure and dynamics of the essential endogenous mycobacterial polyketide synthase Pks13.
Nat.Struct.Mol.Biol., 30, 2023
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4KF4
 | | Crystal Structure of sfCherry | | Descriptor: | fluorescent protein sfCherry | | Authors: | Nguyen, H.B, Hung, L.-W, Yeates, T.O, Waldo, G.S, Terwilliger, T.C. | | Deposit date: | 2013-04-26 | | Release date: | 2013-12-18 | | Last modified: | 2024-11-27 | | Method: | X-RAY DIFFRACTION (1.994 Å) | | Cite: | Split green fluorescent protein as a modular binding partner for protein crystallization.
Acta Crystallogr.,Sect.D, 69, 2013
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5WWK
 | | Highly stable green fluorescent protein | | Descriptor: | Green fluorescent protein | | Authors: | Sriram, R, George, A, Kesavan, M, Jaimohan, S.M, Kamini, N.R, Easwaramoorthi, S, Ganesh, S, Gunasekaran, K, Ayyadurai, N. | | Deposit date: | 2017-01-02 | | Release date: | 2017-12-13 | | Last modified: | 2024-10-30 | | Method: | X-RAY DIFFRACTION (3.199 Å) | | Cite: | Excited State Electronic Interconversion and Structural Transformation of Engineered Red-Emitting Green Fluorescent Protein Mutant.
J.Phys.Chem.B, 123, 2019
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2ICR
 | | Red fluorescent protein zRFP574 from Zoanthus sp. | | Descriptor: | Red fluorescent protein zoanRFP, SULFATE ION | | Authors: | Pletnev, S, Pletneva, N, Tikhonova, T, Pletnev, V. | | Deposit date: | 2006-09-13 | | Release date: | 2007-10-02 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (1.51 Å) | | Cite: | Refined crystal structures of red and green fluorescent proteins from the button polyp Zoanthus.
Acta Crystallogr.,Sect.D, 63, 2007
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7SAK
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7SAJ
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7SAL
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9MUT
 | | Reduced state of a turn-on thiol-disulfide redox biosensor with a fluorescence-lifetime readout | | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, FORMIC ACID, ... | | Authors: | Rosen, P, Yellen, G, Lim, D.C. | | Deposit date: | 2025-01-14 | | Release date: | 2025-06-18 | | Last modified: | 2025-06-25 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Mechanism and application of thiol-disulfide redox biosensors with a fluorescence-lifetime readout.
Proc.Natl.Acad.Sci.USA, 122, 2025
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9MUV
 | | Oxidized state of a turn-on thiol-disulfide redox biosensor with a fluorescence-lifetime readout | | Descriptor: | ACETIC ACID, DI(HYDROXYETHYL)ETHER, Fluorescent thiol-disulfide redox biosensor, ... | | Authors: | Rosen, P, Yellen, G, Lim, D.C. | | Deposit date: | 2025-01-14 | | Release date: | 2025-06-18 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Mechanism and application of thiol-disulfide redox biosensors with a fluorescence-lifetime readout.
Proc.Natl.Acad.Sci.USA, 122, 2025
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9MUU
 | | Oxidized state of a turn-off thiol-disulfide redox biosensor with a fluorescence-lifetime readout | | Descriptor: | ACETATE ION, FORMIC ACID, Fluorescent thiol-disulfide redox biosensor, ... | | Authors: | Rosen, P, Yellen, G, Lim, D.C. | | Deposit date: | 2025-01-14 | | Release date: | 2025-06-18 | | Method: | X-RAY DIFFRACTION (2.15 Å) | | Cite: | Mechanism and application of thiol-disulfide redox biosensors with a fluorescence-lifetime readout.
Proc.Natl.Acad.Sci.USA, 122, 2025
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9MUS
 | | Reduced state of a turn-off thiol-disulfide redox biosensor with a fluorescence-lifetime readout | | Descriptor: | ACETIC ACID, Fluorescent thiol-disulfide redox biosensor, GLYCEROL, ... | | Authors: | Rosen, P, Yellen, G, Lim, D.C. | | Deposit date: | 2025-01-14 | | Release date: | 2025-06-18 | | Last modified: | 2025-06-25 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | Mechanism and application of thiol-disulfide redox biosensors with a fluorescence-lifetime readout.
Proc.Natl.Acad.Sci.USA, 122, 2025
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