PDB: 72308 resultsInfo pagesStatus searchChemie searchBIRD

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4C9D	Cas6 (TTHB231) product complex Descriptor: CAS6B, R3 REPEAT RNA CLEAVAGE PRODUCT Authors: Jinek, M, Niewoehner, O, Doudna, J.A. Deposit date: 2013-10-02 Release date: 2013-11-06 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (3 Å) Cite: Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases. Nucleic Acids Res., 42, 2014
4C8Z	Cas6 (TTHA0078) product complex Descriptor: CAS6A, POTASSIUM ION, R1 REPEAT RNA CLEAVAGE PRODUCT, ... Authors: Jinek, M, Niewoehner, O, Doudna, J.A. Deposit date: 2013-10-02 Release date: 2013-11-06 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.503 Å) Cite: Evolution of Crispr RNA Recognition and Processing by Cas6 Endonucleases. Nucleic Acids Res., 42, 2014
4JWH	Crystal structure of spTrm10(Full length)-SAH complex Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine(9)-N1)-methyltransferase Authors: Yan, W, Shao, Z. Deposit date: 2013-03-27 Release date: 2013-10-16 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.04 Å) Cite: Crystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrate. Nucleic Acids Res., 42, 2014
1M5K	Crystal structure of a hairpin ribozyme in the catalytically-active conformation Descriptor: CALCIUM ION, CHLORIDE ION, PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A), ... Authors: Rupert, P.B, Ferre-D'Amare, A.R. Deposit date: 2002-07-09 Release date: 2002-08-02 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Transition state stabilization by a catalytic RNA Science, 298, 2002
7P0M	Human mitochondrial Lon protease with substrate in the ATPase and protease domains Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Lon protease homolog, ... Authors: Valentin Gese, G, Shahzad, S, Hallberg, B.M. Deposit date: 2021-06-30 Release date: 2021-08-11 Method: ELECTRON MICROSCOPY (2.75 Å) Cite: A dual allosteric pathway drives human mitochondrial Lon To Be Published
7P09	Human mitochondrial Lon protease with substrate in the ATPase domain Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Lon protease homolog, ... Authors: Valentin Gese, G, Shahzad, S, Hallberg, B.M. Deposit date: 2021-06-29 Release date: 2021-08-11 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: A dual allosteric pathway drives human mitochondrial Lon To Be Published
7P0B	Human mitochondrial Lon protease without substrate Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial Authors: Valentin Gese, G, Shahzad, S, Hallberg, B.M. Deposit date: 2021-06-29 Release date: 2021-08-11 Method: ELECTRON MICROSCOPY (4 Å) Cite: A dual allosteric pathway drives human mitochondrial Lon To Be Published
4KI2	Crystallographic analysis of an RNA-polymerase sigma-subunit fragment complexed with -10 promoter element ssDNA Descriptor: DNA (5'-D(*TP*GP*TP*AP*CP*AP*AP*TP*GP*GP*G)-3'), POTASSIUM ION, RNA polymerase sigma factor Authors: Feklistov, A, Darst, S.A. Deposit date: 2013-05-01 Release date: 2013-09-04 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Crystallographic analysis of an RNA polymerase sigma-subunit fragment complexed with -10 promoter element ssDNA: quadruplex formation as a possible tool for engineering crystal contacts in protein-ssDNA complexes. Acta Crystallogr.,Sect.F, 69, 2013
1JB8	The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular Intercalation Descriptor: 5'-D(*CP*TP*TP*TP*TP*CP*TP*TP*TP*G)-3', 5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3' Authors: Han, G.W, Kopka, M.L, Langs, D, Dickerson, R.E. Deposit date: 2001-06-02 Release date: 2003-07-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Crystal structure of an RNADNA hybrid reveals intermolecular intercalation: Dimer formation by base-pair swapping Proc.Natl.Acad.Sci.USA, 100, 2003
1XDN	High resolution crystal structure of an editosome enzyme from trypanosoma brucei: RNA editing ligase 1 Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA editing ligase MP52 Authors: Deng, J, Schnaufer, A, Salavati, R, Stuart, K.D, Hol, W.G. Deposit date: 2004-09-07 Release date: 2004-12-07 Last modified: 2014-09-10 Method: X-RAY DIFFRACTION (1.2 Å) Cite: High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1. J.Mol.Biol., 343, 2004
2W4R	Crystal structure of the regulatory domain of human LGP2 Descriptor: MERCURY (II) ION, PROBABLE ATP-DEPENDENT RNA HELICASE DHX58, SULFATE ION Authors: Pippig, D.A, Hellmuth, J.C, Cui, S, Kirchhofer, A, Lammens, K, Lammens, A, Schmidt, A, Rothenfusser, S, Hopfner, K.P. Deposit date: 2008-12-01 Release date: 2009-02-24 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.6 Å) Cite: The Regulatory Domain of the Rig-I Family ATPase Lgp2 Senses Double-Stranded RNA. Nucleic Acids Res., 37, 2009
2K66	NMR solution structure of the d3'-stem closed by a GAAA tetraloop of the group II intron Sc.ai5(gamma) Descriptor: 5'-R(*GP*GP*AP*GP*UP*AP*UP*GP*UP*GP*AP*AP*AP*GP*CP*AP*UP*AP*CP*UP*CP*C)-3' Authors: Kruschel, D, Sigel, R.K.O. Deposit date: 2008-07-04 Release date: 2009-07-14 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: NMR structure of the 5' splice site in the group IIB intron Sc.ai5 gamma--conformational requirements for exon-intron recognition. Rna, 20, 2014
1YVZ	Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor Descriptor: 3-[(2,4-DICHLOROBENZOYL)(ISOPROPYL)AMINO]-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, RNA dependent RNA polymerase, SULFATE ION Authors: Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G. Deposit date: 2005-02-16 Release date: 2005-03-22 Last modified: 2017-10-11 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors. J.Biol.Chem., 280, 2005
1I4B	The solution structure of the major family of the mutant stem loop C 5'UUA3' triloop of brome mosaic virus (+) strand RNA Descriptor: 5'-R(*GP*GP*UP*GP*CP*UP*UP*AP*GP*CP*AP*CP*C)-3' Authors: Tinoco Jr, I, Kim, C.-H. Deposit date: 2001-02-20 Release date: 2001-04-21 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Structural and thermodynamic studies on mutant RNA motifs that impair the specificity between a viral replicase and its promoter J.Mol.Biol., 307, 2001
1XPF	HIV-1 subtype A genomic RNA Dimerization Initiation Site Descriptor: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3', MAGNESIUM ION, SODIUM ION, ... Authors: Ennifar, E, Dumas, P. Deposit date: 2004-10-08 Release date: 2005-10-18 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies J.Mol.Biol., 356, 2006
1XPE	HIV-1 subtype B genomic RNA Dimerization Initiation Site Descriptor: 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3', CHLORIDE ION, MAGNESIUM ION, ... Authors: Ennifar, E, Dumas, P. Deposit date: 2004-10-08 Release date: 2005-10-18 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Polymorphism of Bulged-out Residues in HIV-1 RNA DIS Kissing Complex and Structure Comparison with Solution Studies J.Mol.Biol., 356, 2006
4YVH	Crystal Structure of H. influenzae TrmD in complex with sinefungin Descriptor: SINEFUNGIN, tRNA (guanine-N(1)-)-methyltransferase Authors: Yoshida, K, Ito, T, Yokoyama, S. Deposit date: 2015-03-20 Release date: 2015-07-15 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis for methyl-donor-dependent and sequence-specific binding to tRNA substrates by knotted methyltransferase TrmD. Proc.Natl.Acad.Sci.USA, 112, 2015
1YVX	Hepatitis C Virus RNA Polymerase Genotype 2a In Complex With Non- Nucleoside Analogue Inhibitor Descriptor: 3-[ISOPROPYL(4-METHYLBENZOYL)AMINO]-5-PHENYLTHIOPHENE-2-CARBOXYLIC ACID, RNA dependent RNA polymerase, SULFATE ION Authors: Biswal, B.K, Cherney, M.M, Wang, M, Chan, L, Yannopoulos, C.G, Bilimoria, D, Nicolas, O, Bedard, J, James, M.N.G. Deposit date: 2005-02-16 Release date: 2005-03-22 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structures of the RNA dependent RNA polymerase genotype 2a of hepatitis C virus reveal two conformations and suggest mechanisms of inhibition by non-nucleoside inhibitors. J.Biol.Chem., 280, 2005
4YVG	Crystal Structure of H. influenzae TrmD in complex with AdoMet Descriptor: S-ADENOSYLMETHIONINE, tRNA (guanine-N(1)-)-methyltransferase Authors: Ito, T, Yokoyama, S. Deposit date: 2015-03-20 Release date: 2015-07-15 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.549 Å) Cite: Structural basis for methyl-donor-dependent and sequence-specific binding to tRNA substrates by knotted methyltransferase TrmD. Proc.Natl.Acad.Sci.USA, 112, 2015
2VB0	Crystal structure of coxsackievirus B3 proteinase 3C Descriptor: CHLORIDE ION, POLYPROTEIN 3BCD Authors: Anand, K, Mesters, J.R, Goerlach, R, Zell, R, Hilgenfeld, R. Deposit date: 2007-09-05 Release date: 2008-10-28 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal Structure of Coxsackie Virus B3 Proteinase 3C To be Published
5QYB	PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry D06a Descriptor: (3-methoxyphenyl)(pyrrolidin-1-yl)methanone, A1 cistron-splicing factor AAR2, Pre-mRNA-splicing factor 8, ... Authors: Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G. Deposit date: 2020-02-12 Release date: 2020-06-10 Method: X-RAY DIFFRACTION (2.1 Å) Cite: F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening. Structure, 28, 2020
5QZK	PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 35 Descriptor: A1 cistron-splicing factor AAR2, Pre-mRNA-splicing factor 8 Authors: Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G. Deposit date: 2020-02-12 Release date: 2020-06-10 Method: X-RAY DIFFRACTION (1.73 Å) Cite: F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening. Structure, 28, 2020
5R00	PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 51 Descriptor: A1 cistron-splicing factor AAR2, Pre-mRNA-splicing factor 8 Authors: Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G. Deposit date: 2020-02-12 Release date: 2020-06-10 Method: X-RAY DIFFRACTION (1.72 Å) Cite: F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening. Structure, 28, 2020
5QYV	PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 11 Descriptor: A1 cistron-splicing factor AAR2, Pre-mRNA-splicing factor 8 Authors: Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G. Deposit date: 2020-02-12 Release date: 2020-06-10 Method: X-RAY DIFFRACTION (1.59 Å) Cite: F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening. Structure, 28, 2020
5QZQ	PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 41 Descriptor: A1 cistron-splicing factor AAR2, Pre-mRNA-splicing factor 8 Authors: Weiss, M.S, Wollenhaupt, J, Metz, A, Barthel, T, Lima, G.M.A, Heine, A, Mueller, U, Klebe, G. Deposit date: 2020-02-12 Release date: 2020-06-10 Method: X-RAY DIFFRACTION (2.11 Å) Cite: F2X-Universal and F2X-Entry: Structurally Diverse Compound Libraries for Crystallographic Fragment Screening. Structure, 28, 2020

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