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1VTB
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BU of 1vtb by Molmil
THE HEXAGONAL CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTGTACAC) AND ITS COMPARISON WITH THE TETRAGONAL STRUCTURE CORRELATED VARIATIONS IN HELICAL PARAMETERS
Descriptor: DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
Authors:Jain, S.C, Zon, G, Sundaralingam, M.
Deposit date:1991-05-28
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Hexagonal Crystal Structure of the A-DNA Octamer d(GTGTACAC) and Its Comparison with the Tetragonal Structure Correlated Variations in Helical Parameters
Biochemistry, 30, 1991
7PEY
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BU of 7pey by Molmil
Nucleosome 3 of the 4x177 nucleosome array containing H1
Descriptor: DNA (202-MER), DNA (203-MER), Histone H2A type 1-B/E, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PF4
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BU of 7pf4 by Molmil
Nucleosome 3 of the 4x187 nucleosome array containing H1
Descriptor: DNA (167-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
1TF6
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BU of 1tf6 by Molmil
CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
Descriptor: DNA (5'-D(*AP*CP*GP*GP*GP*CP*CP*TP*GP*GP*TP*TP*AP*GP*TP*AP*C P*CP*TP*GP*GP*AP* TP*GP*GP*GP*AP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*AP*GP*GP*T P*AP*CP*TP*AP*AP* CP*CP*AP*GP*GP*CP*CP*CP*G)-3'), PROTEIN (TRANSCRIPTION FACTOR IIIA), ...
Authors:Nolte, R.T, Conlin, R.M, Harrison, S.C, Brown, R.S.
Deposit date:1998-03-02
Release date:1998-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex.
Proc.Natl.Acad.Sci.USA, 95, 1998
8DRH
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BU of 8drh by Molmil
HIGH RESOLUTION NMR STRUCTURE OF THE D(GCGTCAGG)R(CCUGACGC) HYBRID, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA (5'-D(*GP*CP*GP*TP*CP*AP*GP*G)-3'), RNA (5'-R(*CP*CP*UP*GP*AP*CP*GP*C)-3')
Authors:Bachelin, M, Hessler, G, Kurz, G, Hacia, J.G, Dervan, P.B, Kessler, H.
Deposit date:1997-10-13
Release date:1998-05-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of a Stereoregular Phosphorothioate DNA/RNA Duplex
Nat.Struct.Biol., 5, 1998
3PT9
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BU of 3pt9 by Molmil
Crystal structure of mouse DNMT1(731-1602) in the free state
Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE, ZINC ION
Authors:Song, J, Patel, D.J.
Deposit date:2010-12-02
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of DNMT1-DNA complex reveals a role for autoinhibition in maintenance DNA methylation.
Science, 331, 2011
7VG8
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BU of 7vg8 by Molmil
TYLCV Rep-DNA
Descriptor: DNA (5'-((DT)P*(DA)P*(DA)P*(DT)P*(DA)P*(DT)P*(DT)P*(DA)*(DC)P*)-3'), MANGANESE (II) ION, Replication-associated protein
Authors:Zhang, S.Y, Wang, C.N.
Deposit date:2021-09-14
Release date:2022-09-21
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:structure of TYLCV Rep complexed with ssDNA
To Be Published
3I0M
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BU of 3i0m by Molmil
Structure of the S. pombe Nbs1 FHA/BRCT-repeat domain
Descriptor: DNA repair and telomere maintenance protein nbs1, GLYCEROL
Authors:Clapperton, J.A, Lloyd, J, Chapman, J.R, Jackson, S.P, Smerdon, S.J.
Deposit date:2009-06-25
Release date:2009-10-13
Last modified:2012-05-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A supramodular FHA/BRCT-repeat architecture mediates Nbs1 adaptor function in response to DNA damage
Cell(Cambridge,Mass.), 139, 2009
7PEW
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BU of 7pew by Molmil
Nucleosome 1 of the 4x177 nucleosome array containing H1
Descriptor: DNA (176-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PEV
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BU of 7pev by Molmil
Nucleosome stack of the 4x177 nucleosome array containing H1
Descriptor: DNA (520-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
7PFF
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BU of 7pff by Molmil
Nucleosome 3 of the 4x197 nucleosome array containing H1
Descriptor: DNA (167-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ...
Authors:Dombrowski, M, Cramer, P.
Deposit date:2021-08-11
Release date:2022-08-03
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Histone H1 binding to nucleosome arrays depends on linker DNA length and trajectory.
Nat.Struct.Mol.Biol., 29, 2022
1YSE
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BU of 1yse by Molmil
Solution structure of the MAR-binding domain of SATB1
Descriptor: DNA-binding protein SATB1
Authors:Yamasaki, K, Yamaguchi, H.
Deposit date:2005-02-08
Release date:2006-01-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure and DNA-binding Mode of the Matrix Attachment Region-binding Domain of the Transcription Factor SATB1 That Regulates the T-cell Maturation
J.Biol.Chem., 281, 2006
6KCO
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BU of 6kco by Molmil
Shuguo PWWP in complex with ssDNA
Descriptor: DNA (5'-D(*TP*CP*CP*CP*T)-3'), LD23804p
Authors:Liu, Y.C, Huang, Y.
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Shuguo PWWP in complex with ssDNA
To Be Published
3I0N
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BU of 3i0n by Molmil
Structure of the S. pombe Nbs1 FHA/BRCT-repeat domain
Descriptor: DNA repair and telomere maintenance protein nbs1, GLYCEROL
Authors:Clapperton, J.A, Lloyd, J, Chapman, J.R, Jackson, S.P, Smerdon, S.J.
Deposit date:2009-06-25
Release date:2009-10-13
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A supramodular FHA/BRCT-repeat architecture mediates Nbs1 adaptor function in response to DNA damage
Cell(Cambridge,Mass.), 139, 2009
461D
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BU of 461d by Molmil
A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVE
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, RUBIDIUM ION
Authors:Tereshko, V, Minasov, G, Egli, M.
Deposit date:1999-03-12
Release date:1999-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A "Hydrat-Ion Spine" in a B-DNA minor groove
J.Am.Chem.Soc., 121, 1999
414D
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BU of 414d by Molmil
5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3'
Descriptor: DNA (5'-D(*GP*GP*GP*GP*CP*GP*CP*CP*CP*C)-3')
Authors:Savitha, G, Viswamitra, M.A.
Deposit date:1998-07-13
Release date:1999-06-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An A-DNA structure with two independent duplexes in the asymmetric unit.
Acta Crystallogr.,Sect.D, 55, 1999
460D
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BU of 460d by Molmil
A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVE
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, RUBIDIUM ION
Authors:Tereshko, V, Minasov, G, Egli, M.
Deposit date:1999-03-12
Release date:1999-04-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:A "Hydrat-Ion Spine" in a B-DNA minor groove
J.Am.Chem.Soc., 121, 1999
6KCP
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BU of 6kcp by Molmil
Shuguo PWWP in complex with ssDNA
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*T)-3'), LD23804p
Authors:Liu, Y.C, Huang, Y.
Deposit date:2019-06-28
Release date:2020-07-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Shuguo PWWP in complex with ssDNA
To Be Published
4A1F
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BU of 4a1f by Molmil
Crystal structure of C-terminal domain of Helicobacter pylori DnaB Helicase
Descriptor: CITRATE ANION, REPLICATIVE DNA HELICASE
Authors:Stelter, M, Kapp, U, Timmins, J, Terradot, L.
Deposit date:2011-09-14
Release date:2012-03-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Architecture of a Dodecameric Bacterial Replicative Helicase.
Structure, 20, 2012
6A27
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BU of 6a27 by Molmil
Crystal structure of PprA W183R mutant form 1
Descriptor: DNA repair protein PprA, GLYCEROL, SULFATE ION
Authors:Adachi, M, Shibazaki, C, Shimizu, R, Arai, S, Satoh, K, Narumi, I, Kuroki, R.
Deposit date:2018-06-09
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.353 Å)
Cite:Extended structure of pleiotropic DNA repair-promoting protein PprA from Deinococcus radiodurans.
FASEB J., 33, 2019
6A29
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BU of 6a29 by Molmil
Crystal structure of PprA A139R mutant
Descriptor: DNA repair protein PprA
Authors:Adachi, M, Shibazaki, C, Shimizu, R, Arai, S, Satoh, K, Narumi, I, Kuroki, R.
Deposit date:2018-06-09
Release date:2018-12-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Extended structure of pleiotropic DNA repair-promoting protein PprA from Deinococcus radiodurans.
FASEB J., 33, 2019
5I6Q
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BU of 5i6q by Molmil
Crystal structure of color device state B
Descriptor: DNA (26-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*GP*TP*GP*GP*TP*AP*TP*C)-3'), DNA (5'-D(*CP*AP*GP*AP*TP*AP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*TP*AP*CP*G)-3'), ...
Authors:Hao, Y, Birktoft, J, Seeman, N.C.
Deposit date:2016-02-16
Release date:2017-01-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.912 Å)
Cite:A device that operates within a self-assembled 3D DNA crystal.
Nat Chem, 9, 2017
5I6T
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BU of 5i6t by Molmil
Crystal structure of color device state C
Descriptor: DNA (26-MER), DNA (5'-D(*AP*CP*AP*GP*TP*CP*GP*TP*GP*GP*TP*AP*TP*C)-3'), DNA (5'-D(*CP*AP*GP*AP*TP*AP*CP*CP*TP*GP*AP*TP*CP*GP*GP*AP*CP*TP*AP*CP*G)-3'), ...
Authors:Hao, Y, Birktoft, J, Seeman, N.C.
Deposit date:2016-02-16
Release date:2017-01-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (5.283 Å)
Cite:A device that operates within a self-assembled 3D DNA crystal.
Nat Chem, 9, 2017
8CUC
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BU of 8cuc by Molmil
Crystal structure analysis of SALL4 zinc finger domain in complex with DNA
Descriptor: DNA (5'-D(P*CP*GP*AP*AP*AP*TP*AP*TP*TP*AP*GP*C)-3'), DNA (5'-D(P*GP*CP*TP*AP*AP*TP*AP*TP*TP*TP*CP*G)-3'), Sal-like protein 4, ...
Authors:Seo, H.S, Dhe-Paganon, S.
Deposit date:2022-05-17
Release date:2023-05-24
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal Structure Analysis of SALL4 Zinc Finger domain in complex with DNA
To Be Published
3THW
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BU of 3thw by Molmil
Human MutSbeta complexed with an IDL of 4 bases (Loop4) and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA Loop4 hairpin, DNA mismatch repair protein Msh2, ...
Authors:Yang, W.
Deposit date:2011-08-19
Release date:2011-12-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Mechanism of mismatch recognition revealed by human MutSbeta bound to unpaired DNA loops
Nat.Struct.Mol.Biol., 19, 2012

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數據於2024-09-04公開中

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