PDB: 69 resultsInfo pagesStatus searchChemie searchBIRD

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3BUL	E. coli I690C/G743C MetH C-terminal fragment (649-1227) Descriptor: COBALAMIN, Methionine synthase Authors: Koutmos, M, Pattridge, K.A, Ludwig, M.L. Deposit date: 2008-01-03 Release date: 2008-04-01 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A disulfide-stabilized conformer of methionine synthase reveals an unexpected role for the histidine ligand of the cobalamin cofactor. Proc.Natl.Acad.Sci.Usa, 105, 2008
3IVA	Structure of the B12-dependent Methionine Synthase (MetH) C-teminal half with AdoHcy bound Descriptor: COBALAMIN, Methionine synthase, NITRATE ION, ... Authors: Pattridge, K.A, Koutmos, M, Smith, J.L. Deposit date: 2009-08-31 Release date: 2009-11-24 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Insights into the reactivation of cobalamin-dependent methionine synthase. Proc.Natl.Acad.Sci.USA, 106, 2009
1I9C	GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM: COMPLEX WITH ADENOSYLCOBALAMIN AND SUBSTRATE Descriptor: (2S,3S)-3-methyl-aspartic acid, 5'-DEOXYADENOSINE, COBALAMIN, ... Authors: Gruber, K, Kratky, C. Deposit date: 2001-03-19 Release date: 2002-03-19 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Radical Shuttling in a Protein: Ribose Pseudorotation Controls Alkyl-Radical Transfer in the Coenzyme B(12) Dependent Enzyme Glutamate Mutase Angew.Chem.Int.Ed.Engl., 40, 2001
8DPB	MeaB in complex with the cobalamin-binding domain of its target mutase with GMPPCP bound Descriptor: GLYCEROL, MAGNESIUM ION, Methylmalonyl-CoA mutase accessory protein, ... Authors: Vaccaro, F.A, Born, D.A, Drennan, C.L. Deposit date: 2022-07-15 Release date: 2023-03-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.72 Å) Cite: Structure of metallochaperone in complex with the cobalamin-binding domain of its target mutase provides insight into cofactor delivery. Proc.Natl.Acad.Sci.USA, 120, 2023
8SSD	Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8 Descriptor: Methionine synthase Authors: Yamada, K, Mendoza, J, Koutmos, M. Deposit date: 2023-05-08 Release date: 2023-10-11 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo. Nat Commun, 14, 2023
8SSE	Methionine synthase, C-terminal fragment, Cobalamin and Reactivation Domains from Thermus thermophilus HB8 Descriptor: COBALAMIN, Methionine synthase Authors: Yamada, K, Mendoza, J, Koutmos, M. Deposit date: 2023-05-08 Release date: 2023-10-11 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Structure of full-length cobalamin-dependent methionine synthase and cofactor loading captured in crystallo. Nat Commun, 14, 2023
1CB7	GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM RECONSTITUTED WITH METHYL-COBALAMIN Descriptor: CO-METHYLCOBALAMIN, D(-)-TARTARIC ACID, PROTEIN (GLUTAMATE MUTASE) Authors: Gruber, K, Reitzer, R, Kratky, C. Deposit date: 1999-03-03 Release date: 2000-02-28 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2 Å) Cite: Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights. Structure Fold.Des., 7, 1999
1CCW	STRUCTURE OF THE COENZYME B12 DEPENDENT ENZYME GLUTAMATE MUTASE FROM CLOSTRIDIUM COCHLEARIUM Descriptor: CYANOCOBALAMIN, D(-)-TARTARIC ACID, PROTEIN (GLUTAMATE MUTASE) Authors: Reitzer, R, Gruber, K, Kratky, C. Deposit date: 1999-03-01 Release date: 2000-03-01 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Glutamate mutase from Clostridium cochlearium: the structure of a coenzyme B12-dependent enzyme provides new mechanistic insights Structure Fold.Des., 7, 1999
1BMT	HOW A PROTEIN BINDS B12: A 3.O ANGSTROM X-RAY STRUCTURE OF THE B12-BINDING DOMAINS OF METHIONINE SYNTHASE Descriptor: CO-METHYLCOBALAMIN, METHIONINE SYNTHASE Authors: Drennan, C.L, Huang, S, Drummond, J.T, Matthews, R.G, Ludwig, M.L. Deposit date: 1994-09-02 Release date: 1995-06-03 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (3 Å) Cite: How a protein binds B12: A 3.0 A X-ray structure of B12-binding domains of methionine synthase. Science, 266, 1994
3KOX	Crystal Structure of ornithine 4,5 aminomutase in complex with 2,4-diaminobutyrate (Anaerobic) Descriptor: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KP0	Crystal Structure of ORNITHINE 4,5 AMINOMUTASE in complex with 2,4-diaminobutyrate (DAB) (Aerobic) Descriptor: (2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acid, 5'-DEOXYADENOSINE, COBALAMIN, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KOY	Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Aerobic) Descriptor: (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine, 5'-DEOXYADENOSINE, COBALAMIN, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KOZ	Crystal Structure of ornithine 4,5 aminomutase in complex with ornithine (Anaerobic) Descriptor: (E)-N~5~-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-ornithine, 5'-DEOXYADENOSINE, COBALAMIN, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KP1	Crystal structure of ornithine 4,5 aminomutase (Resting State) Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, D-ornithine aminomutase E component, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2019-10-30 Method: X-RAY DIFFRACTION (2.01 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
3KOW	Crystal Structure of ornithine 4,5 aminomutase backsoaked complex Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, D-ornithine aminomutase E component, ... Authors: Wolthers, K.R, Levy, C.W, Scrutton, N.S, Leys, D. Deposit date: 2009-11-14 Release date: 2010-01-26 Last modified: 2012-10-24 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Large-scale domain dynamics and adenosylcobalamin reorientation orchestrate radical catalysis in ornithine 4,5-aminomutase. J.Biol.Chem., 285, 2010
1E1C	METHYLMALONYL-COA MUTASE H244A Mutant Descriptor: COBALAMIN, DESULFO-COENZYME A, METHYLMALONYL-COA MUTASE ALPHA CHAIN, ... Authors: Evans, P.R, Thoma, N.H. Deposit date: 2000-04-30 Release date: 2000-05-07 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (2.62 Å) Cite: Protection of Radical Intermediates at the Active Site of Adenosylcobalamin-Dependent Methylmalonyl-Coa Mutase Biochemistry, 39, 2000
2REQ	METHYLMALONYL-COA MUTASE, NON-PRODUCTIVE COA COMPLEX, IN OPEN CONFORMATION REPRESENTING SUBSTRATE-FREE STATE Descriptor: COBALAMIN, COENZYME A, METHYLMALONYL-COA MUTASE Authors: Evans, P.R, Mancia, F. Deposit date: 1997-09-22 Release date: 1998-01-28 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure, 6, 1998
4XC7	Isobutyryl-CoA mutase fused with bound butyryl-CoA and without cobalamin or GDP (apo-IcmF) Descriptor: Butyryl Coenzyme A, Isobutyryl-CoA mutase fused, L(+)-TARTARIC ACID Authors: Jost, M, Drennan, C.L. Deposit date: 2014-12-17 Release date: 2015-02-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.45 Å) Cite: Visualization of a radical B12 enzyme with its G-protein chaperone. Proc.Natl.Acad.Sci.USA, 112, 2015
6REQ	METHYLMALONYL-COA MUTASE, 3-CARBOXYPROPYL-COA INHIBITOR COMPLEX Descriptor: 3-CARBOXYPROPYL-COENZYME A, COBALAMIN, GLYCEROL, ... Authors: Evans, P.R, Mancia, F. Deposit date: 1998-09-03 Release date: 1999-09-09 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of substrate complexes of methylmalonyl-CoA mutase. Biochemistry, 38, 1999
5REQ	Methylmalonyl-COA MUTASE, Y89F Mutant, substrate complex Descriptor: COBALAMIN, GLYCEROL, METHYLMALONYL(CARBADETHIA)-COENZYME A, ... Authors: Evans, P.R, Thomae, N.H. Deposit date: 1998-08-03 Release date: 1998-08-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Stabilization of radical intermediates by an active-site tyrosine residue in methylmalonyl-CoA mutase. Biochemistry, 37, 1998
3REQ	METHYLMALONYL-COA MUTASE, SUBSTRATE-FREE STATE (POOR QUALITY STRUCTURE) Descriptor: ADENOSINE, COBALAMIN, METHYLMALONYL-COA MUTASE Authors: Evans, P.R, Mancia, F. Deposit date: 1997-12-04 Release date: 1998-03-18 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure, 6, 1998
4REQ	Methylmalonyl-COA Mutase substrate complex Descriptor: 5'-DEOXYADENOSINE, COBALAMIN, GLYCEROL, ... Authors: Evans, P.R, Mancia, F. Deposit date: 1998-06-17 Release date: 1999-01-13 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Conformational changes on substrate binding to methylmalonyl CoA mutase and new insights into the free radical mechanism. Structure, 6, 1998
4XC6	Isobutyryl-CoA mutase fused with bound adenosylcobalamin, GDP, and Mg (holo-IcmF/GDP) Descriptor: 5'-DEOXYADENOSINE, ACETATE ION, COBALAMIN, ... Authors: Jost, M, Drennan, C.L. Deposit date: 2014-12-17 Release date: 2015-02-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.35 Å) Cite: Visualization of a radical B12 enzyme with its G-protein chaperone. Proc.Natl.Acad.Sci.USA, 112, 2015
4R3U	Crystal structure of 2-Hydroxyisobutyryl-CoA Mutase Descriptor: 2-hydroxyisobutyryl-CoA mutase large subunit, 2-hydroxyisobutyryl-CoA mutase small subunit, 3-HYDROXYBUTANOYL-COENZYME A, ... Authors: Zahn, M, Kurteva-Yaneva, N, Rohwerder, T, Straeter, N. Deposit date: 2014-08-18 Release date: 2015-03-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis of the stereospecificity of bacterial B12-dependent 2-hydroxyisobutyryl-CoA mutase. J.Biol.Chem., 290, 2015
4XC8	Isobutyryl-CoA mutase fused with bound butyryl-CoA, GDP, and Mg and without cobalamin (apo-IcmF/GDP) Descriptor: Butyryl Coenzyme A, GUANOSINE-5'-DIPHOSPHATE, Isobutyryl-CoA mutase fused, ... Authors: Jost, M, Drennan, C.L. Deposit date: 2014-12-17 Release date: 2015-02-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.25 Å) Cite: Visualization of a radical B12 enzyme with its G-protein chaperone. Proc.Natl.Acad.Sci.USA, 112, 2015

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