PDB: 505 resultsInfo pagesStatus searchChemie searchBIRD

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7LO6	Structure of CD4 mimetic BNM-III-170 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab Descriptor: 17b Fab Heavy Chain, 17b Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Jette, C.A, Bjorkman, P.J. Deposit date: 2021-02-09 Release date: 2021-04-14 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Cryo-EM structures of HIV-1 trimer bound to CD4-mimetics BNM-III-170 and M48U1 adopt a CD4-bound open conformation. Nat Commun, 12, 2021
7LLK	Cryo-EM structure of Q23.17_DS-SOSIP in complex with Glycan276-Dependent Broadly Neutralizing Antibody 179NC75 Fab Descriptor: 179NC75 Fab Heavy chain, 179NC75 Fab Light chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Manne, K, Acharya, P. Deposit date: 2021-02-04 Release date: 2021-06-02 Last modified: 2021-11-17 Method: ELECTRON MICROSCOPY (4.8 Å) Cite: Structural basis of glycan276-dependent recognition by HIV-1 broadly neutralizing antibodies. Cell Rep, 37, 2021
7L7T	BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component A) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2(7S) - gp120, ... Authors: Antanasijevic, A, Cannac, F, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-30 Release date: 2021-08-04 Last modified: 2021-08-25 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8C	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-3 from animal Rh.33104 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Perrett, H.R, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2021-08-25 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8Y	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-5 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Cannac, F, Ward, A.B. Deposit date: 2021-01-01 Release date: 2021-08-04 Last modified: 2021-08-25 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8A	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-1 from animal Rh.33104 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Torrents de la Pena, A, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8T	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-1 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8S	BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-4 from animal Rh.33172 (Wk38 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2(7S) - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L86	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-1 from animal Rh.32034 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8E	BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-1 from animal Rh.33172 (Wk38 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-10-09 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L89	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-4 from animal Rh.32034 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Rantalainen, K, Perrett, H.R, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-11-13 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
8FLW	Cryo-EM Structure of PGT145 DU303 Fab in complex with BG505 DS-SOSIP.664 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... Authors: Gorman, J, Kwong, P.D. Deposit date: 2022-12-22 Release date: 2023-05-31 Last modified: 2023-07-26 Method: ELECTRON MICROSCOPY (3.58 Å) Cite: Improved HIV-1 neutralization breadth and potency of V2-apex antibodies by in silico design. Cell Rep, 42, 2023
7L8X	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-4 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Yang, Y.R, Ward, A.B. Deposit date: 2021-01-01 Release date: 2021-08-04 Last modified: 2021-08-25 Method: ELECTRON MICROSCOPY (3 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8W	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-3 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2021-01-01 Release date: 2021-08-04 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (4.1 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L7U	BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component B) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2(7S) - gp120, ... Authors: Antanasijevic, A, Froes Rocha, R, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-30 Release date: 2021-08-04 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8D	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-4 from animal Rh.33104 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (4.6 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8Z	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-7 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Perrett, H.R, Ward, A.B. Deposit date: 2021-01-01 Release date: 2021-08-04 Last modified: 2021-08-25 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L90	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-8 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Ward, A.B. Deposit date: 2021-01-01 Release date: 2021-08-04 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L88	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-3 from animal Rh.32034 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Cannac, F, Perrett, H.R, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8U	BG505 SOSIP.v5.2 N241/N289 in complex with the polyclonal Fab pAbC-2 from animal Rh.33311 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2 N241/N289 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Rantalainen, K, Ward, A.B. Deposit date: 2021-01-01 Release date: 2021-08-04 Last modified: 2024-10-30 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L87	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-2 from animal Rh.32034 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Yang, Y.R, Perrett, H.R, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-10-16 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8B	BG505 SOSIP MD39 in complex with the polyclonal Fab pAbC-2 from animal Rh.33104 (Wk26 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP MD39 - gp120, ... Authors: Antanasijevic, A, Sewall, L.M, Yang, Y.R, Perrett, H.R, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L8G	BG505 SOSIP.v5.2(7S) in complex with the polyclonal Fab pAbC-3 from animal Rh.33172 (Wk38 time point) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ... Authors: Antanasijevic, A, Sewall, L.M, Rantalainen, K, Ward, A.B. Deposit date: 2020-12-31 Release date: 2021-08-04 Last modified: 2021-09-08 Method: ELECTRON MICROSCOPY (4.3 Å) Cite: Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
8FK5	Cryo-EM Structure of PG9RSH DU011 Fab in complex with BG505 DS-SOSIP.664 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... Authors: Gorman, J, Kwong, P.D. Deposit date: 2022-12-20 Release date: 2023-05-31 Last modified: 2024-11-13 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Improved HIV-1 neutralization breadth and potency of V2-apex antibodies by in silico design. Cell Rep, 42, 2023
8FL1	Cryo-EM Structure of PG9RSH DU025 Fab in complex with BG505 DS-SOSIP.664 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, ... Authors: Gorman, J, Kwong, P.D. Deposit date: 2022-12-21 Release date: 2023-05-31 Last modified: 2023-07-26 Method: ELECTRON MICROSCOPY (3.75 Å) Cite: Improved HIV-1 neutralization breadth and potency of V2-apex antibodies by in silico design. Cell Rep, 42, 2023

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