PDB: 45853 resultsInfo pagesStatus searchChemie searchBIRD

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4H4L	Crystal Structure of ternary complex of HutP(HutP-L-His-Zn) Descriptor: HISTIDINE, Hut operon positive regulatory protein, ZINC ION Authors: Dhakshnamoorthy, B, Misono, T.S, Mizuno, H, Kumar, P.K.R. Deposit date: 2012-09-17 Release date: 2013-09-04 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Alternative binding modes of l-histidine guided by metal ions for the activation of the antiterminator protein HutP of Bacillus subtilis. J.Struct.Biol., 183, 2013
4LF5	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.753 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
1PQT	REFINEMENT OF d(GCGAAGC) HAIRPIN STRUCTURE USING ONE- AND TWO-BOND RESIDUAL DIPOLAR COUPLINGS Descriptor: 5'-D(*GP*CP*GP*AP*AP*GP*C)-3' Authors: Padrta, P, Stefl, R, Zidek, L, Sklenar, V. Deposit date: 2003-06-19 Release date: 2003-07-01 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Refinement of d(GCGAAGC) Hairpin Structure Using One- and Two-Bond Residual Dipolar Couplings J.Biomol.NMR, 24, 2002
4L1M	Structure of the first RCC1-like domain of HERC2 Descriptor: E3 ubiquitin-protein ligase HERC2, SULFATE ION, UNKNOWN ATOM OR ION Authors: Tempel, W, Khan, M.B, Dong, A, Hu, J, Li, Y, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC) Deposit date: 2013-06-03 Release date: 2013-07-03 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structure of the first RCC1-like domain of HERC2 TO BE PUBLISHED
4H03	Crystal structure of NAD+-Ia-actin complex Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Tsurumura, T, Oda, M, Nagahama, M, Tsuge, H. Deposit date: 2012-09-07 Release date: 2013-02-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Arginine ADP-ribosylation mechanism based on structural snapshots of iota-toxin and actin complex Proc.Natl.Acad.Sci.USA, 110, 2013
4KVB	Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Murphy, E.L, Jogl, G. Deposit date: 2013-05-22 Release date: 2014-06-04 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (4.198 Å) Cite: Structural robustness of the ribosome inferred from the X-ray crystal structure of a 30S ribosomal subunit lacking ribosomal protein S17 To be Published
4L1U	Crystal Structure of Human Rtf1 Plus3 Domain in Complex with Spt5 CTR Phosphopeptide Descriptor: GLYCEROL, RNA polymerase-associated protein RTF1 homolog, SULFATE ION, ... Authors: Wier, A.D, Heroux, A, VanDemark, A.P. Deposit date: 2013-06-03 Release date: 2013-10-02 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.424 Å) Cite: Structural basis for Spt5-mediated recruitment of the Paf1 complex to chromatin. Proc.Natl.Acad.Sci.USA, 110, 2013
4EGO	The X-ray crystal structure of CYP199A4 in complex with indole-6-carboxylic acid Descriptor: 1H-indole-6-carboxylic acid, CHLORIDE ION, Cytochrome P450, ... Authors: Zhou, W, Bell, S.G, Yang, W, Zhou, R.M, Tan, A.B.H, Wong, L.-L. Deposit date: 2012-03-31 Release date: 2013-02-20 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.76 Å) Cite: Investigation of the substrate range of CYP199A4: modification of the partition between hydroxylation and desaturation activities by substrate and protein engineering Chemistry, 18, 2012
4E8V	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of K+ and Ba2+ Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, BARIUM ION, Group IIC intron, ... Authors: Marcia, M, Pyle, A.M. Deposit date: 2012-03-20 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.995 Å) Cite: Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4LF4	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: (2R,3R,4R,5R)-2-((1S,2S,3R,4S,6R)-4,6-DIAMINO-3-((2R,3R,6S)-3-AMINO-6-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-2-HYDROXYCYCLOHEXYLOXY)-5-METHYL-4-(METHYLAMINO)-TETRAHYDRO-2H-PYRAN-3,5-DIOL, 16S rRNA, MAGNESIUM ION, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.3421 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
4LLF	Crystal structure of Cucumber Necrosis Virus Descriptor: CALCIUM ION, Capsid protein, ZINC ION Authors: Smith, T. Deposit date: 2013-07-09 Release date: 2013-10-30 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8891 Å) Cite: Atomic structure of cucumber necrosis virus and the role of the capsid in vector transmission. J.Virol., 87, 2013
4ELB	Structure-activity relationship guides enantiomeric preference among potent inhibitors of B. anthracis dihydrofolate reductase Descriptor: (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1R)-1-phenylphthalazin-2(1H)-yl]prop-2-en-1-one, (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-phenylphthalazin-2(1H)-yl]prop-2-en-1-one, CALCIUM ION, ... Authors: Bourne, C.R, Barrow, W.W. Deposit date: 2012-04-10 Release date: 2013-02-13 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structure-activity relationship for enantiomers of potent inhibitors of B. anthracis dihydrofolate reductase. Biochim.Biophys.Acta, 1834, 2013
4EMH	Crystal structure of SpLsm4 Descriptor: Probable U6 snRNA-associated Sm-like protein LSm4 Authors: Jiang, S.M, Wu, D.H, Song, H.W. Deposit date: 2012-04-12 Release date: 2012-06-13 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal Structures of Lsm3, Lsm4 and Lsm5/6/7 from Schizosaccharomyces pombe. Plos One, 7, 2012
4ELF	Structure-activity relationship guides enantiomeric preference among potent inhibitors of B. anthracis dihydrofolate reductase Descriptor: (2E)-3-{5-[(2,4-diaminopyrimidin-5-yl)methyl]-2,3-dimethoxyphenyl}-1-[(1S)-1-(3,3,3-trifluoropropyl)phthalazin-2(1H)-yl ]prop-2-en-1-one, CALCIUM ION, CHLORIDE ION, ... Authors: Bourne, C.R, Barrow, W.W. Deposit date: 2012-04-10 Release date: 2013-02-13 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structure-activity relationship for enantiomers of potent inhibitors of B. anthracis dihydrofolate reductase. Biochim.Biophys.Acta, 1834, 2013
4LAJ	Crystal structure of HIV-1 YU2 envelope gp120 glycoprotein in complex with CD4-mimetic miniprotein, M48U1, and llama single-domain, broadly neutralizing, co-receptor binding site antibody, JM4 Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-AMINOHEXANOIC ACID, ... Authors: Acharya, P, Luongo, T.S, Kwong, P.D. Deposit date: 2013-06-20 Release date: 2013-08-14 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.14 Å) Cite: Heavy Chain-Only IgG2b Llama Antibody Effects Near-Pan HIV-1 Neutralization by Recognizing a CD4-Induced Epitope That Includes Elements of Coreceptor- and CD4-Binding Sites. J.Virol., 87, 2013
4LMX	Light harvesting complex PE555 from the cryptophyte Hemiselmis andersenii CCMP644 Descriptor: 15,16-DIHYDROBILIVERDIN, PHYCOERYTHROBILIN, cryptophyte phycoerythrin (alpha-1 chain), ... Authors: Harrop, S.J, Wilk, K.E, Curmi, P.M.G. Deposit date: 2013-07-11 Release date: 2014-06-18 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Single-residue insertion switches the quaternary structure and exciton states of cryptophyte light-harvesting proteins. Proc.Natl.Acad.Sci.USA, 111, 2014
4LEL	Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the Ribosome Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... Authors: Maehigashi, T, Dunkle, J.A, Dunham, C.M. Deposit date: 2013-06-25 Release date: 2014-08-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.90000033 Å) Cite: Structural insights into +1 frameshifting promoted by expanded or modification-deficient anticodon stem loops. Proc.Natl.Acad.Sci.USA, 111, 2014
4E8R	Structure of Oceanobacillus iheyensis group II intron in a ligand-free state in the presence of Cs+ and Mg2+ Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CESIUM ION, Group IIC intron, ... Authors: Marcia, M, Pyle, A.M. Deposit date: 2012-03-20 Release date: 2012-11-14 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (3.36 Å) Cite: Visualizing Group II Intron Catalysis through the Stages of Splicing. Cell(Cambridge,Mass.), 151, 2012
4H82	Crystal structure of mutant MMP-9 catalytic domain in complex with a twin inhibitor. Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Antoni, C, Stura, E.A, Vera, L, Cassar-Lajeunesse, E, Nuti, E, Dive, V, Rossello, A. Deposit date: 2012-09-21 Release date: 2013-05-01 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystallization of bi-functional ligand protein complexes. J.Struct.Biol., 182, 2013
4LCK	Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA Descriptor: MAGNESIUM ION, Ribosomal protein YbxF, STRONTIUM ION, ... Authors: Zhang, J, Ferre-D'Amare, A.R. Deposit date: 2013-06-21 Release date: 2013-07-31 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Co-crystal structure of a T-box riboswitch stem I domain in complex with its cognate tRNA. Nature, 500, 2013
4GUC	1.4 Angstrom resolution crystal structure of uncharacterized protein BA_2500 from Bacillus anthracis str. Ames Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Protein BA_2500, ... Authors: Halavaty, A.S, Wawrzak, Z, Onopriyenko, O, Kwon, K, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID) Deposit date: 2012-08-29 Release date: 2012-10-10 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (1.4 Å) Cite: 1.4 Angstrom resolution crystal structure of uncharacterized protein BA_2500 from Bacillus anthracis str. Ames To be Published
4GQC	Crystal Structure of Aeropyrum pernix Peroxiredoxin Q Enzyme in Fully-Folded and Locally-Unfolded Conformations Descriptor: DITHIANE DIOL, GLYCEROL, SULFATE ION, ... Authors: Perkins, A, Karplus, P.A, Gretes, M.C, Nelson, K.J, Poole, L.B. Deposit date: 2012-08-22 Release date: 2012-10-24 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Mapping the Active Site Helix-to-Strand Conversion of CxxxxC Peroxiredoxin Q Enzymes. Biochemistry, 51, 2012
4HXG	Pyrococcus horikoshii acylaminoacyl peptidase (orthorhombic crystal form) Descriptor: CHLORIDE ION, HEXANE-1,6-DIOL, MAGNESIUM ION, ... Authors: Kiss-Szeman, A, Menyhard, D.K, Tichy-Racs, E, Hornung, B, Radi, K, Szeltner, Z, Domokos, K, Szamosi, I, Naray-Szabo, G, Polgar, L, Harmat, V. Deposit date: 2012-11-09 Release date: 2013-05-08 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.7 Å) Cite: A Self-compartmentalizing Hexamer Serine Protease from Pyrococcus Horikoshii: SUBSTRATE SELECTION ACHIEVED THROUGH MULTIMERIZATION. J.Biol.Chem., 288, 2013
1RWD	Backbone NMR Structure of a Mutant P. Furiosus Rubredoxin Using Residual Dipolar Couplings Descriptor: Rubredoxin Authors: Tian, F, Valafar, H, Prestegard, J.H, Southeast Collaboratory for Structural Genomics (SECSG) Deposit date: 2003-12-16 Release date: 2003-12-23 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: A Dipolar Coupling Based Strategy for Simultaneous Resonance Assignment and Structure Determination of Protein Backbones J.Am.Chem.Soc., 123, 2001
4I8C	X-ray structure of NikA in complex with Ni-(L-His)2 Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ... Authors: Lebrette, H, Iannello, M, Fontecilla-Camps, J.C, Cavazza, C. Deposit date: 2012-12-03 Release date: 2013-01-30 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.503 Å) Cite: The binding mode of Ni-((L)-His)(2) in NikA revealed by X-ray crystallography. J.Inorg.Biochem., 121C, 2012

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