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8ITG
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BU of 8itg by Molmil
Crystal structure of lasso peptide epimerase MslH in complexed with precursor peptide variant MslAW21G
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein), ...
Authors:Nakashima, Y, Hiroyuki, M.
Deposit date:2023-03-22
Release date:2023-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of lasso peptide epimerase MslH reveals metal-dependent acid/base catalytic mechanism.
Nat Commun, 14, 2023
8IIP
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BU of 8iip by Molmil
Complex form of MsmUdgX H109Q mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109Q
Descriptor: BETA-MERCAPTOETHANOL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase, ...
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
8IIN
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BU of 8iin by Molmil
Complex form of MsmUdgX H109K mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109K
Descriptor: IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase, URACIL
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
8IIR
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BU of 8iir by Molmil
MsmUdgX H109S/Q53A double mutant
Descriptor: BETA-MERCAPTOETHANOL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
8ILX
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BU of 8ilx by Molmil
mCherry-LaM3 complex
Descriptor: LAM3, MCherry fluorescent protein
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
8IM1
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BU of 8im1 by Molmil
mCherry-LaM1 complex
Descriptor: LaM1, MCherry fluorescent protein, SULFATE ION
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
5VYL
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BU of 5vyl by Molmil
Crystal Structure of N-terminal half of Herpes Simplex virus Type 1 UL37 protein
Descriptor: Inner tegument protein, SODIUM ION
Authors:Koenigsberg, A, Heldwein, E.E.
Deposit date:2017-05-25
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:Crystal Structure of the N-Terminal Half of the Traffic Controller UL37 from Herpes Simplex Virus 1.
J. Virol., 91, 2017
8IGV
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BU of 8igv by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
8III
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BU of 8iii by Molmil
Complex form of MsmUdgX H109C mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109C
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase, ...
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
5W4P
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BU of 5w4p by Molmil
Structure of the E28A mutant of the HIV-1 capsid protein
Descriptor: CHLORIDE ION, Capsid protein p24, IODIDE ION
Authors:Gres, A.T, Kirby, K.A, Sarafianos, S.G.
Deposit date:2017-06-12
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket.
MBio, 10, 2019
8IIG
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BU of 8iig by Molmil
Complex form of MsmUdgX H109A mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by UdgX H109A
Descriptor: IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase, URACIL
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
5W0C
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BU of 5w0c by Molmil
Cytochrome P450 (CYP) 2C9 TCA007 Inhibitor Complex
Descriptor: Cytochrome P450 2C9, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Johnson, E.F, Hsu, M.-H.
Deposit date:2017-05-30
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:Determinants of the Inhibition of DprE1 and CYP2C9 by Antitubercular Thiophenes.
Angew. Chem. Int. Ed. Engl., 56, 2017
5W0N
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BU of 5w0n by Molmil
Structure of human TUT7 catalytic module (CM) in complex with UMPNPP and U2 RNA
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine, IODIDE ION, MAGNESIUM ION, ...
Authors:Faehnle, C.R, Walleshauser, J, Joshua-Tor, L.
Deposit date:2017-05-31
Release date:2017-06-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis.
Nat. Struct. Mol. Biol., 24, 2017
5W1C
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BU of 5w1c by Molmil
Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cytidine
Descriptor: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, CALCIUM ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*TP*GP*AP*AP*C)-3'), ...
Authors:Qiao, Q, Wang, L, Wu, H.
Deposit date:2017-06-02
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:AID Recognizes Structured DNA for Class Switch Recombination.
Mol. Cell, 67, 2017
5W1I
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BU of 5w1i by Molmil
Crystal structure of LbaCas13a (C2c2) bound to mature crRNA (20-nt spacer)
Descriptor: IODIDE ION, LbaCas13a (C2c2), mature crRNA
Authors:Knott, G.J, Doudna, J.A.
Deposit date:2017-06-03
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Guide-bound structures of an RNA-targeting A-cleaving CRISPR-Cas13a enzyme.
Nat. Struct. Mol. Biol., 24, 2017
8IQB
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BU of 8iqb by Molmil
Crystal structure of AsfvPrimPol N-terminal Prim/Pol domain
Descriptor: Putative primase C962R
Authors:Shao, Z.W, Gan, J.H.
Deposit date:2023-03-16
Release date:2023-07-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structures and implications of the C962R protein of African swine fever virus.
Nucleic Acids Res., 51, 2023
8IQD
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BU of 8iqd by Molmil
Crystal structure of AsfvPrimPol N-terminal Prim/Pol domain in complex with Mn2+ and dCTP
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, Putative primase C962R
Authors:Shao, Z.W, Gan, J.H.
Deposit date:2023-03-16
Release date:2023-07-26
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structures and implications of the C962R protein of African swine fever virus.
Nucleic Acids Res., 51, 2023
5W4H
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BU of 5w4h by Molmil
X-ray crystallographic structure of a beta-hairpin peptide mimic derived from Abeta 16-36. Synchrotron data set. (ORN)KLV(MEA)FAE(ORN)AIIGLMV.
Descriptor: A-beta 17_36 peptide: ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLU-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL
Authors:Kreutzer, A.G, Spencer, R.K, Nowick, J.S.
Deposit date:2017-06-11
Release date:2017-11-22
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.718 Å)
Cite:A Hexamer of a Peptide Derived from A beta 16-36.
Biochemistry, 56, 2017
5W4I
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BU of 5w4i by Molmil
X-ray crystallographic structure of a beta-hairpin peptide mimic derived from Abeta 16-36. Rigaku data set. (ORN)KLV(MEA)FAE(ORN)AIIGLMV.
Descriptor: A-beta 17_36: ORN-LYS-LEU-VAL-MEA-PHE-ALA-GLU-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL, CHLORIDE ION, IODIDE ION
Authors:Kreutzer, A.G, McKnelly, K.J, Nowick, J.S.
Deposit date:2017-06-11
Release date:2017-11-22
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.026 Å)
Cite:A Hexamer of a Peptide Derived from A beta 16-36.
Biochemistry, 56, 2017
5W4O
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BU of 5w4o by Molmil
Structure of the R18A mutant of the HIV-1 capsid protein
Descriptor: CHLORIDE ION, Capsid protein p24, IODIDE ION
Authors:Gres, A.T, Kirby, K.A, Sarafianos, S.G.
Deposit date:2017-06-12
Release date:2018-06-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket.
MBio, 10, 2019
5W57
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BU of 5w57 by Molmil
Structure of Holo AztC
Descriptor: Periplasmic solute binding protein, ZINC ION
Authors:Avalos, D, Yukl, E.T.
Deposit date:2017-06-14
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanisms of zinc binding to the solute-binding protein AztC and transfer from the metallochaperone AztD.
J. Biol. Chem., 292, 2017
8I50
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BU of 8i50 by Molmil
Crystal structure of DNA octamer containing GuNA[Me,Me]
Descriptor: DNA (5'-D(*GP*(OIQ)P*GP*(BRU)P*AP*CP*AP*C)-3')
Authors:Aoyama, H, Obika, S, Yamaguchi, T.
Deposit date:2023-01-21
Release date:2023-08-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Mechanism of the extremely high duplex-forming ability of oligonucleotides modified with N-tert-butylguanidine- or N-tert-butyl-N'- methylguanidine-bridged nucleic acids.
Nucleic Acids Res., 51, 2023
5W56
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BU of 5w56 by Molmil
Structure of Apo AztC
Descriptor: GLYCEROL, Periplasmic solute binding protein, SODIUM ION
Authors:Avalos, D, Yukl, E.T.
Deposit date:2017-06-14
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Mechanisms of zinc binding to the solute-binding protein AztC and transfer from the metallochaperone AztD.
J. Biol. Chem., 292, 2017
8HY7
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BU of 8hy7 by Molmil
EGFR kinase domain mutant "TMLR" with compound 28f
Descriptor: Epidermal growth factor receptor, ~{N}-[3-[[6-fluoranyl-2-[[4-(4-methylpiperazin-1-yl)phenyl]amino]quinazolin-4-yl]amino]phenyl]prop-2-enamide
Authors:Wang, Y.X, Wu, C.Y.
Deposit date:2023-01-06
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:The crystal structure of EGFR kinase domain(T790M/L858R) in complex with compound 28f
To Be Published
5W4J
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BU of 5w4j by Molmil
X-ray crystallographic structure of a beta-hairpin peptide mimic. (ORN)KLV(MEA)FAE(ORN)AIIGLMV.
Descriptor: A-beta 17_36 peptide: ORN-LYS-VAL-PHE-MEA-ALA-ALA-ASP-ORN-ALA-ILE-ILE-GLY-LEU-MET-VAL
Authors:Kreutzer, A.G, Nowick, J.S.
Deposit date:2017-06-11
Release date:2017-11-22
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:A Hexamer of a Peptide Derived from A beta 16-36.
Biochemistry, 56, 2017

222624

數據於2024-07-17公開中

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