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5ZCY
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BU of 5zcy by Molmil
Crystal structure of archaeal translation initiation factor 1 at 1.5 Angstroms resolution
Descriptor: NITRATE ION, NITRITE ION, Protein translation factor SUI1 homolog
Authors:Gogoi, P, Kanaujia, S.P.
Deposit date:2018-02-22
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Archaeal and eukaryal translation initiation factor 1 differ in their RNA interacting loops.
FEBS Lett., 592, 2018
5YUB
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BU of 5yub by Molmil
Crystal structure of voltage-gated sodium channel NavAb E32Q mutant
Descriptor: CALCIUM ION, CHAPSO, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Irie, K, Shimomura, T, Fujiyoshi, Y.
Deposit date:2017-11-21
Release date:2017-12-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.40004 Å)
Cite:Structural insight on the voltage dependence of prokaryotic voltage gated sodium channel NavAb.
FEBS Lett., 2017
5EXO
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BU of 5exo by Molmil
Crystal structure of Human galectin-3 CRD in complex with methyl 2-O-acetyl-3-O-(2H-chromene-3-yl-methyl)-a-D-galactopyranoside inhibitor
Descriptor: CHLORIDE ION, Galectin-3, [(2~{S},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-5-oxidanyl-4-[(2-oxidanylidenechromen-3-yl)methoxy]oxan-3-yl] ethanoate
Authors:Collins, P.M, Blanchard, H.
Deposit date:2015-11-23
Release date:2016-10-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:A Selective Galactose-Coumarin-Derived Galectin-3 Inhibitor Demonstrates Involvement of Galectin-3-glycan Interactions in a Pulmonary Fibrosis Model.
J.Med.Chem., 59, 2016
3KH5
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BU of 3kh5 by Molmil
Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, SULFATE ION, ...
Authors:Gomez Garcia, I, Oyenarte, I, Martinez-Cruz, L.A.
Deposit date:2009-10-30
Release date:2010-04-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of protein MJ1225 from Methanocaldococcus jannaschii shows strong conservation of key structural features seen in the eukaryal gamma-AMPK.
J.Mol.Biol., 65, 2010
3ZEU
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BU of 3zeu by Molmil
Structure of a Salmonella typhimurium YgjD-YeaZ heterodimer bound to ATPgammaS
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Nichols, C.E, Lamb, H.K, Thompson, P, El Omari, K, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2012-12-07
Release date:2013-03-20
Last modified:2017-03-29
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:Crystal Structure of the Dimer of Two Essential Salmonella Typhimurium Proteins, Ygjd & Yeaz and Calorimetric Evidence for the Formation of a Ternary Ygjd-Yeaz-Yjee Complex.
Protein Sci., 22, 2013
5FO1
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BU of 5fo1 by Molmil
E301A mutant of FAD synthetase from Corynebacterium ammoniagenes
Descriptor: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION
Authors:Martinez-Julvez, M, Herguedas, B, Milagros, M.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes.
Sci Rep, 7, 2017
1M6H
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BU of 1m6h by Molmil
Human glutathione-dependent formaldehyde dehydrogenase
Descriptor: Glutathione-dependent formaldehyde dehydrogenase, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Sanghani, P.C, Robinson, H, Bosron, W.F, Hurley, T.D.
Deposit date:2002-07-16
Release date:2002-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human glutathione-dependent formaldehyde dehydrogenase. Structures of apo, binary, and inhibitory ternary complexes.
Biochemistry, 41, 2002
8FE8
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BU of 8fe8 by Molmil
Crystal Structure of HIV-1 RT in Complex with the non-nucleoside inhibitor 18b1
Descriptor: 1,2-ETHANEDIOL, 5-[(4-{4-[(E)-2-cyanoethenyl]-2,6-dimethylphenoxy}pyrimidin-2-yl)amino]-2-[4-(methanesulfonyl)piperazin-1-yl]benzonitrile, Reverse transcriptase p51, ...
Authors:Rumrill, S, Ruiz, F.X, Arnold, E.
Deposit date:2022-12-05
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Discovery of diarylpyrimidine derivatives bearing piperazine sulfonyl as potent HIV-1 nonnucleoside reverse transcriptase inhibitors.
Commun Chem, 6, 2023
5FO0
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BU of 5fo0 by Molmil
D298E mutant of FAD synthetase from Corynebacterium ammoniagenes
Descriptor: PYROPHOSPHATE, RIBOFLAVIN BIOSYNTHESIS PROTEIN RIBF, SULFATE ION
Authors:Martinez-Julvez, M, Herguedas, B, Milagros, M.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:The trimer interface in the quaternary structure of the bifunctional prokaryotic FAD synthetase from Corynebacterium ammoniagenes.
Sci Rep, 7, 2017
1P68
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BU of 1p68 by Molmil
Solution structure of S-824, a de novo designed four helix bundle
Descriptor: De novo designed protein S-824
Authors:Wei, Y, Kim, S, Fela, D, Baum, J, Hecht, M.H.
Deposit date:2003-04-29
Release date:2003-11-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a de novo protein from a designed combinatorial library.
Proc.Natl.Acad.Sci.Usa, 100, 2003
5X4J
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BU of 5x4j by Molmil
The crystal structure of Pyrococcus furiosus RecJ (Zn-soaking)
Descriptor: CHLORIDE ION, Uncharacterized protein, ZINC ION
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5X4K
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BU of 5x4k by Molmil
The complex crystal structure of Pyrococcus furiosus RecJ and CMP
Descriptor: CYTIDINE-5'-MONOPHOSPHATE, Uncharacterized protein, ZINC ION
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
5X4H
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BU of 5x4h by Molmil
The crystal structure of Pyrococcus furiosus RecJ (wild-type)
Descriptor: MAGNESIUM ION, Uncharacterized protein
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2019-12-18
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
3HDI
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BU of 3hdi by Molmil
Crystal structure of Bacillus halodurans metallo peptidase
Descriptor: COBALT (II) ION, Processing protease, SULFATE ION, ...
Authors:Aleshin, A, Gramatikova, S, Strongin, A.Y, Stec, B, Liddington, R.C, Smith, J.W.
Deposit date:2009-05-07
Release date:2009-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal and solution structures of a prokaryotic M16B peptidase: an open and shut case.
Structure, 17, 2009
3LFZ
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BU of 3lfz by Molmil
Crystal Structure of Protein MJ1225 from Methanocaldococcus jannaschii, a putative archaeal homolog of g-AMPK.
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Gomez-Garcia, I, Oyenarte, I, Kortazar, D, Martinez-Cruz, L.A.
Deposit date:2010-01-19
Release date:2010-04-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The crystal structure of protein MJ1225 from Methanocaldococcus jannaschii shows strong conservation of key structural features seen in the eukaryal gamma-AMPK.
J.Mol.Biol., 65, 2010
5X4I
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BU of 5x4i by Molmil
Pyrococcus furiosus RecJ (D83A, Mn-soaking)
Descriptor: CHLORIDE ION, MANGANESE (II) ION, Uncharacterized protein
Authors:Li, M.J, Yi, G.S, Yu, F, Zhou, H, Chen, J.N, Xu, C.Y, Wang, F.P, Xiao, X, He, J.H, Liu, X.P.
Deposit date:2017-02-13
Release date:2018-02-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.092 Å)
Cite:The crystal structure of Pyrococcus furiosus RecJ implicates it as an ancestor of eukaryotic Cdc45.
Nucleic Acids Res., 45, 2017
4FSE
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BU of 4fse by Molmil
crystal structure of beta-site app-cleaving enzyme 1 (bace-wt) complex with N-(N-(4-amino-3,5- dichlorobenzyl)carbamimidoyl)-3-(4-methoxyphenyl)-5- methyl-4-isothiazolecarboxamide
Descriptor: Beta-secretase 1, IODIDE ION, N-[N-(4-amino-3,5-dichlorobenzyl)carbamimidoyl]-3-(4-methoxyphenyl)-5-methyl-1,2-thiazole-4-carboxamide
Authors:Muckelbauer, J.K.
Deposit date:2012-06-27
Release date:2012-10-10
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Acyl guanidine inhibitors of beta-secretase (BACE-1): optimization of a micromolar hit to a nanomolar lead via iterative solid- and solution-phase library synthesis
J.Med.Chem., 55, 2012
7JRV
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BU of 7jrv by Molmil
Phospholipase D engineered mutant bound to phosphatidic acid (30 minute soak)
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dibutanoate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-13
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JRB
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BU of 7jrb by Molmil
Phospholipase D engineered mutant
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Phospholipase D
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-12
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.493 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JS5
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BU of 7js5 by Molmil
Phospholipase D engineered mutant (TNYR) inactive enzyme (H168A) bound to 1-inositol phosphate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, D-MYO-INOSITOL-1-PHOSPHATE, GLYCEROL, ...
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-13
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JRW
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BU of 7jrw by Molmil
Phospholipase D engineered mutant bound to phosphatidic acid (5 day soak)
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dibutanoate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-13
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JS7
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BU of 7js7 by Molmil
Phospholipase D engineered mutant (TNYR) H442 covalent adduct with 1-inositol phosphate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, D-MYO-INOSITOL-1-PHOSPHATE, GLYCEROL, ...
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-13
Release date:2021-04-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JRU
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BU of 7jru by Molmil
Phospholipase D engineered mutant bound to phosphatidic acid (8 hour soak)
Descriptor: (2R)-3-(phosphonooxy)propane-1,2-diyl dibutanoate, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, ...
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-13
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JRC
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BU of 7jrc by Molmil
Phospholipase D engineered mutant in complex with phosphate
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, PHOSPHATE ION, ...
Authors:Vrielink, A, Samantha, A.
Deposit date:2020-08-12
Release date:2021-04-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structures of an engineered phospholipase D with specificity for secondary alcohol transphosphatidylation: insights into plasticity of substrate binding and activation.
Biochem.J., 478, 2021
7JQQ
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BU of 7jqq by Molmil
The bacteriophage Phi-29 viral genome packaging motor assembly
Descriptor: DNA (60-MER), DNA packaging protein, MAGNESIUM ION, ...
Authors:White, M.A, Woodson, M, Morais, M.C.
Deposit date:2020-08-11
Release date:2021-05-19
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:A viral genome packaging motor transitions between cyclic and helical symmetry to translocate dsDNA.
Sci Adv, 7, 2021

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數據於2024-09-11公開中

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