Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

9CK7
DownloadVisualize
BU of 9ck7 by Molmil
Lineage IV Lassa virus glycoprotein (Josiah) in complex with polyclonal antibody (GPC-A epitope) from rabbit 187
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brouwer, P.J.M, Perrett, H.R, Ward, A.B.
Deposit date:2024-07-08
Release date:2024-09-25
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Defining bottlenecks and opportunities for Lassa virus neutralization by structural profiling of vaccine-induced polyclonal antibody responses.
Cell Rep, 43, 2024
7P4Y
DownloadVisualize
BU of 7p4y by Molmil
GlnK2 from Methanothermococcus thermolithotrophicus in the apo state at a resolution of 2.3 A
Descriptor: CHLORIDE ION, GlnK2 from Methanothermococcus thermolithotrophicus
Authors:Mueller, M.-C, Wagner, T.
Deposit date:2021-07-13
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Oxoglutarate Binding Site and Regulatory Mechanism Are Conserved in Ammonium Transporter Inhibitors GlnKs from Methanococcales .
Int J Mol Sci, 22, 2021
8YN5
DownloadVisualize
BU of 8yn5 by Molmil
Cryo-EM structure of histamine H3 receptor in complex with histamine and Gi
Descriptor: Antibody fragment scFv16, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Zhang, X, Liu, G, Li, X, Gong, W.
Deposit date:2024-03-10
Release date:2024-10-09
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of ligand recognition and activation of the histamine receptor family.
Nat Commun, 15, 2024
9JR2
DownloadVisualize
BU of 9jr2 by Molmil
Cryo-EM structure of PTH-PTH1R-Gq (upright state)
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(q) subunit alpha-1 (miniGq), ...
Authors:Sano, F.K, Hirano, H, Itoh, Y, Nureki, O.
Deposit date:2024-09-29
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Insights into G-protein coupling preference from cryo-EM structures of Gq-bound PTH1R
To Be Published
9FEK
DownloadVisualize
BU of 9fek by Molmil
Crystal structure of guanidinase from Nitrospira inopinata
Descriptor: MANGANESE (II) ION, NICKEL (II) ION, Putative agmatinase 2, ...
Authors:Puehringer, D, Mccarthy, A.
Deposit date:2024-05-20
Release date:2024-08-14
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Growth of complete ammonia oxidizers on guanidine.
Nature, 633, 2024
7P4V
DownloadVisualize
BU of 7p4v by Molmil
GlnK1 from Methanothermococcus thermolithotrophicus with dADP at a resolution of 1.94 A
Descriptor: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, GlnK1 from Methanothermococcus thermolithotrophicus
Authors:Mueller, M.-C, Wagner, T.
Deposit date:2021-07-13
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The Oxoglutarate Binding Site and Regulatory Mechanism Are Conserved in Ammonium Transporter Inhibitors GlnKs from Methanococcales .
Int J Mol Sci, 22, 2021
8DJX
DownloadVisualize
BU of 8djx by Molmil
Cytosolic ascorbate peroxidase from Sorghum bicolor - Compound II
Descriptor: L-ascorbate peroxidase, PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, ...
Authors:Zhang, B, Kang, C.
Deposit date:2022-07-01
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:A sorghum ascorbate peroxidase with four binding sites has activity against ascorbate and phenylpropanoids.
Plant Physiol., 192, 2023
9FFH
DownloadVisualize
BU of 9ffh by Molmil
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.
Biorxiv, 2024
6OZ3
DownloadVisualize
BU of 6oz3 by Molmil
Crystal structure of broadly neutralizing antibody N49P9.1 Fab in complex with HIV-1 Clade A/E strain 93TH057 gp120 core
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, N49P9.1 antibody Fab heavy chain, N49P9.1 antibody Fab light chain, ...
Authors:Tolbert, W.D, Pazgier, M.
Deposit date:2019-05-15
Release date:2020-08-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Crystal structure of broadly neutralizing antibody N49P9.1 Fab in complex with HIV-1 Clade A/E strain 93TH)57 gp120 core
To Be Published
9IN6
DownloadVisualize
BU of 9in6 by Molmil
Capsid of Vibrio cholerae phage mature VP1
Descriptor: SHP of VP1, major capsid of VP1
Authors:Liu, H.R, Pang, H.
Deposit date:2024-07-05
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Three-dimensional structures of Vibrio cholerae typing podophage VP1 in two states
to be published
9ENK
DownloadVisualize
BU of 9enk by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-phenylalanine
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, L-amino acid oxidase 4, PHENYLALANINE, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 598, 2024
9CUO
DownloadVisualize
BU of 9cuo by Molmil
Crystal structure of CRBN with compound 3
Descriptor: (3S)-3-(3-methyl-2-oxo-2,3-dihydro-1H-1,3-benzimidazol-1-yl)piperidine-2,6-dione, 1,2-ETHANEDIOL, Protein cereblon, ...
Authors:Zheng, X, Ji, N, Campbell, V, Slavin, A, Zhu, X, Chen, D, Rong, H, Enerson, B, Mayo, M, Sharma, K, Browne, C.M, Klaus, C.R, Li, H, Massa, G, McDonald, A.A, Shi, Y, Sintchak, M, Skouras, S, Walther, D.M, Yuan, K, Zhang, Y, Kelleher, J, Guang, L, Luo, X, Mainolfi, N, Weiss, M.M.
Deposit date:2024-07-26
Release date:2024-08-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery of KT-474─a Potent, Selective, and Orally Bioavailable IRAK4 Degrader for the Treatment of Autoimmune Diseases.
J.Med.Chem., 2024
7P52
DownloadVisualize
BU of 7p52 by Molmil
GlnK1 from Methanocaldococcus jannaschii with Mg-ATP and 2-oxoglutarate at a resolution of 1.2 A
Descriptor: 2-OXOGLUTARIC ACID, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Mueller, M.-C, Wagner, T.
Deposit date:2021-07-13
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.20002 Å)
Cite:The Oxoglutarate Binding Site and Regulatory Mechanism Are Conserved in Ammonium Transporter Inhibitors GlnKs from Methanococcales .
Int J Mol Sci, 22, 2021
9JA1
DownloadVisualize
BU of 9ja1 by Molmil
The RNA polymerase II elongation complex from Saccharomyces cerevisiae
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DNA (5'-D(P*GP*CP*TP*CP*CP*TP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*TP*CP*TP*CP*GP*AP*T)-3'), DNA (5'-D(P*TP*GP*GP*GP*AP*GP*AP*AP*GP*GP*AP*GP*C)-3'), ...
Authors:Yi, G, Ma, J, Zhang, P.
Deposit date:2024-08-23
Release date:2024-09-04
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:The RNA polymerase II elongation complex from Saccharomyces cerevisiae
To Be Published
9BR7
DownloadVisualize
BU of 9br7 by Molmil
Crystal structure of human succinyl-CoA:glutarate-CoA transferase (SUGCT) in complex with Losartan carboxylic acid
Descriptor: AMMONIUM ION, SULFATE ION, Succinate--hydroxymethylglutarate CoA-transferase, ...
Authors:Wu, R, Lazarus, M.B.
Deposit date:2024-05-10
Release date:2024-08-07
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Characterization, Structure, and Inhibition of the Human Succinyl-CoA:glutarate-CoA Transferase, a Putative Genetic Modifier of Glutaric Aciduria Type 1.
Acs Chem.Biol., 19, 2024
9BP6
DownloadVisualize
BU of 9bp6 by Molmil
Structure of alpha1B and betaI/IVb microtubule bound to GMPCPP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Zehr, E.A, Roll-Mecak, A.
Deposit date:2024-05-07
Release date:2024-06-12
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of human alpha 1B/ beta I+ beta IVb microtubules shed light on isoform specific assembly
Biorxiv, 2023
7P50
DownloadVisualize
BU of 7p50 by Molmil
GlnK2 from Methanothermococcus thermolithotrophicus in complex with Mg-ATP and 2-oxoglutarate at a resolution of 1.16 A
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-OXOGLUTARIC ACID, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Mueller, M.-C, Wagner, T.
Deposit date:2021-07-13
Release date:2021-10-06
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:The Oxoglutarate Binding Site and Regulatory Mechanism Are Conserved in Ammonium Transporter Inhibitors GlnKs from Methanococcales .
Int J Mol Sci, 22, 2021
9JBQ
DownloadVisualize
BU of 9jbq by Molmil
Structure of the complex between h1F3 Fab and PcrV fragment
Descriptor: Heavy chain, PcrV, light chain
Authors:Numata, S, Hara, T, Izawa, M, Okuno, Y, Sato, Y, Yamane, S, Maki, H, Sato, T, Yamano, Y.
Deposit date:2024-08-27
Release date:2024-09-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Novel humanized anti-PcrV monoclonal antibody COT-143 protects mice from lethal Pseudomonas aeruginosa infection via inhibition of toxin translocation by the type III secretion system.
Antimicrob.Agents Chemother., 68, 2024
9FJM
DownloadVisualize
BU of 9fjm by Molmil
Cryo-EM structure of the phalloidin-bound pointed end of the actin filament.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
Authors:Boiero Sanders, M, Oosterheert, W, Hofnagel, O, Bieling, P, Raunser, S.
Deposit date:2024-05-31
Release date:2024-09-11
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Phalloidin and DNase I-bound F-actin pointed end structures reveal principles of filament stabilization and disassembly.
Nat Commun, 15, 2024
9LDT
DownloadVisualize
BU of 9ldt by Molmil
DESIGN AND SYNTHESIS OF NEW ENZYMES BASED ON THE LACTATE DEHYDROGENASE FRAMEWORK
Descriptor: LACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXAMIC ACID, ...
Authors:Dunn, C.R, Holbrook, J.J, Muirhead, H.
Deposit date:1991-11-26
Release date:1993-10-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and synthesis of new enzymes based on the lactate dehydrogenase framework.
Philos.Trans.R.Soc.London,Ser.B, 332, 1991
9BXO
DownloadVisualize
BU of 9bxo by Molmil
Straight Filament of tau amyloids found in Down Syndrome individuals
Descriptor: Microtubule-associated protein tau
Authors:Tse, E, Ghosh, U, Condello, C, Southworth, D.
Deposit date:2024-05-22
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures reveal tau filaments from Down syndrome adopt Alzheimer's disease fold.
Acta Neuropathol Commun, 12, 2024
9ENC
DownloadVisualize
BU of 9enc by Molmil
Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln
Descriptor: tRNA pseudouridine(38/39) synthase, tRNA-Gln
Authors:Lin, T.-Y, Jezowski, J, Glatt, S.
Deposit date:2024-03-12
Release date:2024-07-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:The molecular basis of tRNA selectivity by human pseudouridine synthase 3.
Mol.Cell, 84, 2024
9C3S
DownloadVisualize
BU of 9c3s by Molmil
Crystal structure of DNA N6-Adenine Methyltransferase M.BceJIV from Burkholderia cenocepacia in complex with duplex DNA substrate containing GTATAC as recognition sequence
Descriptor: DNA1, DNA2, Methyltransferase, ...
Authors:Kottur, J, Quintana-Feliciano, R, Aggarwal, A.K.
Deposit date:2024-06-02
Release date:2024-09-11
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Burkholderia cenocepacia epigenetic regulator M.BceJIV simultaneously engages two DNA recognition sequences for methylation.
Nat Commun, 15, 2024
9ENI
DownloadVisualize
BU of 9eni by Molmil
L-amino acid oxidase 4 (HcLAAO4) from the fungus Hebeloma cylindrosporum in complex with L-glutamine
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, GLUTAMINE, L-amino acid oxidase 4, ...
Authors:Gilzer, D, Koopmeiners, S, Fischer von Mollard, G, Niemann, H.H.
Deposit date:2024-03-13
Release date:2024-08-14
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and enzyme engineering of the broad substrate spectrum l-amino acid oxidase 4 from the fungus Hebeloma cylindrosporum.
Febs Lett., 598, 2024
9FFG
DownloadVisualize
BU of 9ffg by Molmil
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry
Descriptor: Major capsid protein
Authors:Bardy, P, MacDonald, C.I.W, Jenkins, H.T, Byrom, L, Chechik, M, Hart, S.J, Turkenburg, J.P, Blaza, J.N, Fogg, P.C.M, Antson, A.A.
Deposit date:2024-05-23
Release date:2024-06-12
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A stargate mechanism of Microviridae genome delivery unveiled by cryogenic electron tomography.
Biorxiv, 2024

226707

數據於2024-10-30公開中

PDB statisticsPDBj update infoContact PDBjnumon