Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IUG
DownloadVisualize
BU of 8iug by Molmil
Cryo-EM structure of the RC-LH core complex from roseiflexus castenholzii
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 2-O-octyl-beta-D-glucopyranose, ...
Authors:Wang, G.-L, Qi, C.-H, Yu, L.-J.
Deposit date:2023-03-24
Release date:2023-11-22
Last modified:2023-12-06
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:New insights on the photocomplex of Roseiflexus castenholzii revealed from comparisons of native and carotenoid-depleted complexes.
J.Biol.Chem., 299, 2023
8IUN
DownloadVisualize
BU of 8iun by Molmil
Cryo-EM structure of the CRT-LESS RC-LH core complex from roseiflexus castenholzii
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 2-O-octyl-beta-D-glucopyranose, ...
Authors:Wang, G.-L, Qi, C.-H, Yu, L.-J.
Deposit date:2023-03-24
Release date:2023-12-06
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:New insights on the photocomplex of Roseiflexus castenholzii revealed from comparisons of native and carotenoid-depleted complexes.
J.Biol.Chem., 299, 2023
8IRG
DownloadVisualize
BU of 8irg by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 30-microsecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IR6
DownloadVisualize
BU of 8ir6 by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 20-nanosecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRB
DownloadVisualize
BU of 8irb by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRH
DownloadVisualize
BU of 8irh by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-microsecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRF
DownloadVisualize
BU of 8irf by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 1-microsecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IR7
DownloadVisualize
BU of 8ir7 by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-nanosecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IR8
DownloadVisualize
BU of 8ir8 by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 1-microsecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRE
DownloadVisualize
BU of 8ire by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 200-nanosecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IR5
DownloadVisualize
BU of 8ir5 by Molmil
XFEL structure of cyanobacterial photosystem II under dark conditions
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IR9
DownloadVisualize
BU of 8ir9 by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 30-microsecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRC
DownloadVisualize
BU of 8irc by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 5-millisecond delay (Single conformation)
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRA
DownloadVisualize
BU of 8ira by Molmil
XFEL structure of cyanobacterial photosystem II following one flash (1F) with a 200-microsecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRI
DownloadVisualize
BU of 8iri by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 5-millisecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IRD
DownloadVisualize
BU of 8ird by Molmil
XFEL structure of cyanobacterial photosystem II following two flashes (2F) with a 20-nanosecond delay
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Li, H, Suga, M, Shen, J.R.
Deposit date:2023-03-17
Release date:2024-01-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Oxygen-evolving photosystem II structures during S 1 -S 2 -S 3 transitions.
Nature, 626, 2024
8IFC
DownloadVisualize
BU of 8ifc by Molmil
Arbekacin-bound E.coli 70S ribosome in the PURE system
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T.
Deposit date:2023-02-17
Release date:2024-02-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside.
J.Biochem., 175, 2024
8IFE
DownloadVisualize
BU of 8ife by Molmil
Arbekacin-added human 80S ribosome
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T.
Deposit date:2023-02-17
Release date:2024-02-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.57 Å)
Cite:Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside.
J.Biochem., 175, 2024
8IP8
DownloadVisualize
BU of 8ip8 by Molmil
Wheat 80S ribosome stalled on AUG-Stop boron dependently
Descriptor: 18S ribosomal RNA, 40S ribosomal protein eL8, 40S ribosomal protein eS1, ...
Authors:Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T.
Deposit date:2023-03-14
Release date:2024-02-21
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Nat.Chem.Biol., 20, 2024
8IUF
DownloadVisualize
BU of 8iuf by Molmil
Cryo-EM structure of Euglena gracilis super-complex I+III2+IV, composite
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Wu, M.C, Tian, H.T, He, Z.X, Hu, Y.Q, Zhou, L.
Deposit date:2023-03-24
Release date:2024-02-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
8IFD
DownloadVisualize
BU of 8ifd by Molmil
Dibekacin-added human 80S ribosome
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T.
Deposit date:2023-02-17
Release date:2024-02-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside.
J.Biochem., 175, 2024
8IFB
DownloadVisualize
BU of 8ifb by Molmil
Dibekacin-bound E.coli 70S ribosome in the PURE system
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T.
Deposit date:2023-02-17
Release date:2024-02-14
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.43 Å)
Cite:Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside.
J.Biochem., 175, 2024
8IUJ
DownloadVisualize
BU of 8iuj by Molmil
Cryo-EM structure of Euglena gracilis super-complex III2+IV2, composite
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-DILAUROYL-SN-GLYCERO-3-PHOSPHATE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, ...
Authors:Wu, M.C, Tian, H.T, He, Z.X, Hu, Y.Q, Zhou, L.
Deposit date:2023-03-24
Release date:2024-02-28
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Nat Commun, 15, 2024
7LQI
DownloadVisualize
BU of 7lqi by Molmil
Cryo-EM of KFE8 thicker nanotube
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021
7LQG
DownloadVisualize
BU of 7lqg by Molmil
Cryo-EM of the KFE8 thinner nanotube (class 1, C2)
Descriptor: KFE8 peptide
Authors:Wang, F, Gnewou, O.M, Egelman, E.H, Conticello, V.P.
Deposit date:2021-02-13
Release date:2021-06-30
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Deterministic chaos in the self-assembly of beta sheet nanotubes from an amphipathic oligopeptide.
Matter, 4, 2021

221716

數據於2024-06-26公開中

PDB statisticsPDBj update infoContact PDBjnumon