1V9H
| Crystal structure of the RNase MC1 mutant Y101A in complex with 5'-UMP | Descriptor: | Ribonuclease MC, SULFATE ION, URIDINE-5'-MONOPHOSPHATE | Authors: | Kimura, K, Numata, T, Kakuta, Y, Kimura, M. | Deposit date: | 2004-01-26 | Release date: | 2004-10-05 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Amino acids conserved at the C-terminal half of the ribonuclease t2 family contribute to protein stability of the enzymes Biosci.Biotechnol.Biochem., 68, 2004
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1V9I
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1V9J
| Solution structure of a BolA-like protein from Mus musculus | Descriptor: | BolA-like protein RIKEN cDNA 1110025L05 | Authors: | Kasai, T, Inoue, M, Koshiba, S, Yabuki, T, Aoki, M, Nunokawa, E, Seki, E, Matsuda, T, Matsuda, N, Tomo, Y, Shirouzu, M, Terada, T, Obayashi, N, Hamana, H, Shinya, N, Tatsuguchi, A, Yasuda, S, Yoshida, M, Hirota, H, Matsuo, Y, Tani, K, Suzuki, H, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-01-26 | Release date: | 2004-02-10 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Solution structure of a BolA-like protein from Mus musculus Protein Sci., 13, 2004
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1V9K
| The crystal structure of the catalytic domain of pseudouridine synthase RluC from Escherichia coli | Descriptor: | Ribosomal large subunit pseudouridine synthase C, SULFATE ION | Authors: | Machida, Y, Mizutani, K, Unzai, S, Park, S.-Y, Tame, J.R.H. | Deposit date: | 2004-01-26 | Release date: | 2004-05-18 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli Biochemistry, 43, 2004
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1V9L
| L-glutamate dehydrogenase from Pyrobaculum islandicum complexed with NAD | Descriptor: | NICOTINAMIDE-ADENINE-DINUCLEOTIDE, glutamate dehydrogenase | Authors: | Bhuiya, M.W, Sakuraba, H, Ohshima, T, Imagawa, T, Katunuma, N, Tsuge, H. | Deposit date: | 2004-01-26 | Release date: | 2004-12-14 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.8 Å) | Cite: | The First Crystal Structure of Hyperthermostable NAD-dependent Glutamate Dehydrogenase from Pyrobaculum islandicum J.Mol.Biol., 345, 2005
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1V9M
| Crystal structure of the C subunit of V-type ATPase from Thermus thermophilus | Descriptor: | GLYCEROL, V-type ATP synthase subunit C | Authors: | Numoto, N, Kita, A, Miki, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-01-26 | Release date: | 2004-05-04 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.85 Å) | Cite: | Structure of the C subunit of V-type ATPase from Thermus thermophilus at 1.85 A resolution. Acta Crystallogr.,Sect.D, 60, 2004
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1V9N
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1V9O
| Crystal structure of TT1020 from Thermus thermophilus HB8 | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, NITROGEN REGULATORY PROTEIN PII | Authors: | Wang, H, Sakai, H, Takemoto-Hori, C, Kaminishi, T, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-01-27 | Release date: | 2005-01-11 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal structures of the signal transducing protein GlnK from Thermus thermophilus HB8. J.Struct.Biol., 149, 2005
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1V9P
| Crystal Structure Of Nad+-Dependent DNA Ligase | Descriptor: | ADENOSINE MONOPHOSPHATE, DNA ligase, ZINC ION | Authors: | Lee, J.Y, Chang, C, Song, H.K, Moon, J, Yang, J.K, Kim, H.K, Kwon, S.K, Suh, S.W. | Deposit date: | 2004-01-27 | Release date: | 2004-03-30 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Crystal structure of NAD(+)-dependent DNA ligase: modular architecture and functional implications. Embo J., 19, 2000
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1V9Q
| Crystal Structure of an Artificial Metalloprotein:Mn(III)(3,3'-Me2-salophen)/apo-A71G Myoglobin | Descriptor: | 'N,N'-BIS-(2-HYDROXY-3-METHYL-BENZYLIDENE)-BENZENE-1,2-DIAMINE', MANGANESE (III) ION, Myoglobin, ... | Authors: | Ueno, T, Koshiyama, T, Kono, M, Kondo, K, Ohashi, M, Suzuki, A, Yamane, T, Watanabe, Y. | Deposit date: | 2004-01-29 | Release date: | 2005-05-17 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | Coordinated Design of Cofactor and Active Site Structures in Development of New Protein Catalysts J.Am.Chem.Soc., 127, 2005
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1V9S
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1V9T
| Structure of E. coli cyclophilin B K163T mutant bound to succinyl-ALA-PRO-ALA-P-nitroanilide | Descriptor: | (SIN)APA(NIT), cyclophilin B | Authors: | Konno, M, Sano, Y, Okudaira, K, Kawaguchi, Y, Yamagishi-Ohmori, Y, Fushinobu, S, Matsuzawa, H. | Deposit date: | 2004-02-03 | Release date: | 2004-09-21 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Escherichia coli cyclophilin B binds a highly distorted form of trans-prolyl peptide isomer Eur.J.Biochem., 271, 2004
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1V9U
| Human Rhinovirus 2 bound to a fragment of its cellular receptor protein | Descriptor: | CALCIUM ION, Coat protein VP1, Coat protein VP2, ... | Authors: | Verdaguer, N, Fita, I, Reithmayer, M, Moser, R, Blaas, D. | Deposit date: | 2004-02-03 | Release date: | 2004-05-04 | Last modified: | 2024-10-09 | Method: | X-RAY DIFFRACTION (3.6 Å) | Cite: | X-ray structure of a minor group human rhinovirus bound to a fragment of its cellular receptor protein NAT.STRUCT.MOL.BIOL., 11, 2004
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1V9V
| Solution structure of putative domain of human KIAA0561 protein | Descriptor: | KIAA0561 protein | Authors: | Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-03 | Release date: | 2005-03-01 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Solution structure of putative domain of human KIAA0561 protein To be Published
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1V9W
| Solution structure of mouse putative 42-9-9 protein | Descriptor: | putative 42-9-9 protein | Authors: | Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-03 | Release date: | 2004-08-03 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | Solution structure of mouse putative 42-9-9 protein To be Published
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1V9X
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1V9Y
| Crystal Structure of the heme PAS sensor domain of Ec DOS (ferric form) | Descriptor: | Heme pas sensor protein, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Kurokawa, H, Lee, D.S, Watanabe, M, Sagami, I, Mikami, B, Raman, C.S, Shimizu, T. | Deposit date: | 2004-02-04 | Release date: | 2004-05-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.32 Å) | Cite: | A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor. J.Biol.Chem., 279, 2004
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1V9Z
| Crystal Structure of the heme PAS sensor domain of Ec DOS (Ferrous Form) | Descriptor: | Heme pas sensor protein, PROTOPORPHYRIN IX CONTAINING FE | Authors: | Kurokawa, H, Lee, D.S, Watanabe, M, Sagami, I, Mikami, B, Raman, C.S, Shimizu, T. | Deposit date: | 2004-02-04 | Release date: | 2004-05-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor. J.Biol.Chem., 279, 2004
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1VA0
| Crystal Structure of the Native Form of Uroporphyrin III C-methyl transferase from Thermus thermophilus | Descriptor: | 1,2-ETHANEDIOL, CHLORIDE ION, Uroporphyrin-III C-methyltransferase | Authors: | Rehse, P.H, Kitao, T, Tahirov, T.H, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2004-02-05 | Release date: | 2005-02-15 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.97 Å) | Cite: | Structure of a closed-form uroporphyrinogen-III C-methyltransferase from Thermus thermophilus. Acta Crystallogr.,Sect.D, 61, 2005
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1VA1
| Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 1) | Descriptor: | Transcription factor Sp1, ZINC ION | Authors: | Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y. | Deposit date: | 2004-02-07 | Release date: | 2005-02-08 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | NMR structure of transcription factor Sp1 DNA binding domain Biochemistry, 43, 2004
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1VA2
| Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2) | Descriptor: | Transcription factor Sp1, ZINC ION | Authors: | Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y. | Deposit date: | 2004-02-07 | Release date: | 2005-02-08 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | NMR structure of transcription factor Sp1 DNA binding domain Biochemistry, 43, 2004
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1VA3
| Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 3) | Descriptor: | Transcription factor Sp1, ZINC ION | Authors: | Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y. | Deposit date: | 2004-02-07 | Release date: | 2005-02-08 | Last modified: | 2023-12-27 | Method: | SOLUTION NMR | Cite: | NMR structure of transcription factor Sp1 DNA binding domain Biochemistry, 43, 2004
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1VA4
| Pseudomonas fluorescens aryl esterase | Descriptor: | Arylesterase, GLYCEROL | Authors: | Cheeseman, J.D, Tocilj, A, Park, S, Schrag, J.D, Kazlauskas, R.J. | Deposit date: | 2004-02-11 | Release date: | 2004-07-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.804 Å) | Cite: | Structure of an aryl esterase from Pseudomonas fluorescens. Acta Crystallogr.,Sect.D, 60, 2004
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1VA5
| Antigen 85C with octylthioglucoside in active site | Descriptor: | Antigen 85-C, octyl 1-thio-beta-D-glucopyranoside | Authors: | Ronning, D.R, Vissa, V, Besra, G.S, Belisle, J.T, Sacchettini, J.C, TB Structural Genomics Consortium (TBSGC) | Deposit date: | 2004-02-11 | Release date: | 2004-07-06 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.02 Å) | Cite: | Mycobacterium tuberculosis Antigen 85A and 85C Structures Confirm Binding Orientation and Conserved Substrate Specificity J.Biol.Chem., 279, 2004
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1VA6
| Crystal structure of Gamma-glutamylcysteine synthetase from Escherichia Coli B complexed with Transition-state analogue | Descriptor: | (2S)-2-AMINO-4-[[(2R)-2-CARBOXYBUTYL](PHOSPHONO)SULFONIMIDOYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, Glutamate--cysteine ligase, ... | Authors: | Hibi, T, Nii, H, Nakatsu, T, Kato, H, Hiratake, J, Oda, J. | Deposit date: | 2004-02-12 | Release date: | 2004-10-05 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structure of gamma-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis PROC.NATL.ACAD.SCI.USA, 101, 2004
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