1SVA
 
 | | SIMIAN VIRUS 40 | | Descriptor: | SIMIAN VIRUS 40 | | Authors: | Stehle, T, Gamblin, S.J, Harrison, S.C. | | Deposit date: | 1995-11-27 | | Release date: | 1996-06-10 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | The structure of simian virus 40 refined at 3.1 A resolution.
Structure, 4, 1996
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3QK2
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3QN2
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3BWQ
 | | Structure of free SV40 VP1 pentamer | | Descriptor: | Capsid protein VP1 | | Authors: | Neu, U, Stehle, T. | | Deposit date: | 2008-01-10 | | Release date: | 2008-03-04 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Structural basis of GM1 ganglioside recognition by simian virus 40.
Proc.Natl.Acad.Sci.Usa, 105, 2008
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3BWR
 | | SV40 VP1 pentamer in complex with GM1 oligosaccharide | | Descriptor: | 1,2-ETHANEDIOL, Capsid protein VP1, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose-(1-4)-[N-acetyl-alpha-neuraminic acid-(2-3)]beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | | Authors: | Neu, U, Stehle, T. | | Deposit date: | 2008-01-10 | | Release date: | 2008-03-04 | | Last modified: | 2023-08-30 | | Method: | X-RAY DIFFRACTION (2.25 Å) | | Cite: | Structural basis of GM1 ganglioside recognition by simian virus 40.
Proc.Natl.Acad.Sci.Usa, 105, 2008
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2ITL
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2IPR
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2ITJ
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2NL8
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2FUF
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1Z1D
 | | Structural Model for the interaction between RPA32 C-terminal domain and SV40 T antigen origin binding domain. | | Descriptor: | Large T antigen, Replication protein A 32 kDa subunit | | Authors: | Arunkumar, A.I, Klimovich, V, Jiang, X, Ott, R.D, Mizoue, L, Fanning, E, Chazin, W.J. | | Deposit date: | 2005-03-03 | | Release date: | 2005-05-17 | | Last modified: | 2024-05-22 | | Method: | SOLUTION NMR | | Cite: | Insights into hRPA32 C-terminal domain--mediated assembly of the simian virus 40 replisome.
Nat.Struct.Mol.Biol., 12, 2005
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4FGN
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5D9I
 | | SV40 Large T antigen origin binding domain bound to artificial DNA fork | | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ... | | Authors: | Meinke, G, Bohm, A, Bullock, P.A. | | Deposit date: | 2015-08-18 | | Release date: | 2015-09-09 | | Last modified: | 2023-09-27 | | Method: | X-RAY DIFFRACTION (1.7 Å) | | Cite: | Structure-based analysis of the interaction between the simian virus 40 T-antigen origin binding domain and single-stranded DNA.
J. Virol., 85, 2011
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4ZH1
 | | Complement factor H in complex with the GM1 glycan | | Descriptor: | Complement C3, Complement factor H, GLYCEROL, ... | | Authors: | Blaum, B.S, Stehle, T. | | Deposit date: | 2015-04-24 | | Release date: | 2016-01-13 | | Last modified: | 2024-01-10 | | Method: | X-RAY DIFFRACTION (2.24 Å) | | Cite: | Complement Factor H and Simian Virus 40 bind the GM1 ganglioside in distinct conformations.
Glycobiology, 26, 2016
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5KEP
 | | High resolution cryo-EM maps of Human Papillomavirus 16 reveal L2 location and heparin-induced conformational changes | | Descriptor: | Major capsid protein L1 | | Authors: | Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S. | | Deposit date: | 2016-06-10 | | Release date: | 2017-01-25 | | Last modified: | 2024-05-15 | | Method: | ELECTRON MICROSCOPY (4.3 Å) | | Cite: | Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
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5KEQ
 | | High resolution cryo-EM maps of Human papillomavirus 16 reveal L2 location and heparin-induced conformational changes | | Descriptor: | Major capsid protein L1 | | Authors: | Guan, J, Bywaters, S.M, Brendle, S.A, Ashley, R.E, Makhov, A.M, Conway, J.F, Christensen, N.D, Hafenstein, S. | | Deposit date: | 2016-06-10 | | Release date: | 2017-01-25 | | Last modified: | 2024-05-15 | | Method: | ELECTRON MICROSCOPY (4.3 Å) | | Cite: | Cryoelectron Microscopy Maps of Human Papillomavirus 16 Reveal L2 Densities and Heparin Binding Site.
Structure, 25, 2017
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1VPN
 | | UNASSEMBLED POLYOMAVIRUS VP1 PENTAMER | | Descriptor: | POLYOMAVIRUS VP1 PENTAMER | | Authors: | Stehle, T, Harrison, S.C. | | Deposit date: | 1997-03-07 | | Release date: | 1997-05-15 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | High-resolution structure of a polyomavirus VP1-oligosaccharide complex: implications for assembly and receptor binding.
Embo J., 16, 1997
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1VPS
 | | POLYOMAVIRUS VP1 PENTAMER COMPLEXED WITH A DISIALYLATED HEXASACCHARIDE | | Descriptor: | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, POLYOMAVIRUS VP1 PENTAMER | | Authors: | Stehle, T, Harrison, S.C. | | Deposit date: | 1997-03-07 | | Release date: | 1997-05-15 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | High-resolution structure of a polyomavirus VP1-oligosaccharide complex: implications for assembly and receptor binding.
Embo J., 16, 1997
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1SIE
 | | MURINE POLYOMAVIRUS COMPLEXED WITH A DISIALYLATED OLIGOSACCHARIDE | | Descriptor: | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, POLYOMAVIRUS COAT PROTEIN VP1 | | Authors: | Stehle, T, Harrison, S.C. | | Deposit date: | 1995-12-12 | | Release date: | 1996-06-20 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (3.65 Å) | | Cite: | Crystal structures of murine polyomavirus in complex with straight-chain and branched-chain sialyloligosaccharide receptor fragments.
Structure, 4, 1996
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1SID
 | | MURINE POLYOMAVIRUS COMPLEXED WITH 3'SIALYL LACTOSE | | Descriptor: | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose, POLYOMAVIRUS COAT PROTEIN VP1 | | Authors: | Stehle, T, Harrison, S.C. | | Deposit date: | 1995-12-12 | | Release date: | 1996-06-20 | | Last modified: | 2020-07-29 | | Method: | X-RAY DIFFRACTION (3.65 Å) | | Cite: | Crystal structures of murine polyomavirus in complex with straight-chain and branched-chain sialyloligosaccharide receptor fragments.
Structure, 4, 1996
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3IYS
 | | Homology model of avian polyomavirus asymmetric unit | | Descriptor: | Major capsid protein VP1 | | Authors: | Shen, P.S, Enderlein, D, Nelson, C.D.S, Carter, W.S, Kawano, M, Xing, L, Swenson, R.D, Olson, N.H, Baker, T.S, Cheng, R.H, Atwood, W.J, Johne, R, Belnap, D.M. | | Deposit date: | 2010-04-19 | | Release date: | 2011-01-26 | | Last modified: | 2024-02-21 | | Method: | ELECTRON MICROSCOPY (11.3 Å) | | Cite: | The structure of avian polyomavirus reveals variably sized capsids, non-conserved inter-capsomere interactions, and a possible location of the minor capsid protein VP4.
Virology, 411, 2011
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4FB3
 | | Polyomavirus T-ag binds symmetrical repeats at the viral origin in an asymmetrical manner | | Descriptor: | Large T antigen, ORI DNA oligonucleotide-Crick strand, ORI DNA oligonucleotide-Watson strand | | Authors: | Bohm, A, Harrison, C.J, Schaffhausen, B.S, Jiang, T. | | Deposit date: | 2012-05-22 | | Release date: | 2013-10-23 | | Last modified: | 2024-02-28 | | Method: | X-RAY DIFFRACTION (3.79 Å) | | Cite: | Polyomavirus large T antigen binds symmetrical repeats at the viral origin in an asymmetrical manner.
J.Virol., 87, 2013
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2IF9
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1SVL
 | | Co-crystal structure of SV40 large T antigen helicase domain and ADP | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ZINC ION, ... | | Authors: | Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S. | | Deposit date: | 2004-03-29 | | Release date: | 2004-10-19 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.
Cell(Cambridge,Mass.), 119, 2004
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1SVM
 | | Co-crystal structure of SV40 large T antigen helicase domain and ATP | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ZINC ION, ... | | Authors: | Gai, D, Zhao, R, Finkielstein, C.V, Chen, X.S. | | Deposit date: | 2004-03-29 | | Release date: | 2004-10-19 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (1.94 Å) | | Cite: | Mechanisms of conformational change for a replicative hexameric helicase of SV40 large tumor antigen.
Cell(Cambridge,Mass.), 119, 2004
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