Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6O1H
DownloadVisualize
BU of 6o1h by Molmil
Tryptophan synthase Q114A mutant in complex with N-(4'-trifluoromethoxybenzenesulfonyl)-2-amino-1-ethylphosphate (F9F) at the enzyme alpha-site, cesium ion at the metal coordination site, and 2-aminophenol quinonoid at the enzyme beta site
Descriptor: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]-3-[(2-hydroxyphenyl)amino]propanoic acid, 2-({[4-(TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE, CESIUM ION, ...
Authors:Hilario, E, Dunn, M.F, Mueller, L.J, Fan, L.
Deposit date:2019-02-19
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of Salmonella typhimurium Tryptophan Synthase mutant beta-Q114A with 2-({[4-(trifluoromethoxy)phenyl]sulfonyl}amino)ethyl dihydrogen phosphate (F9F) at the alpha-site, Cesium ion at the metal coordination site, and [3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-serine (PLS) at the beta-site.
To be Published
6GK0
DownloadVisualize
BU of 6gk0 by Molmil
HUMAN DIHYDROOROTATE DEHYDROGENASE IN COMPLEX WITH CLASS III HISTONE DEACETYLASE INHIBITOR
Descriptor: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, 4-~{tert}-butyl-~{N}-[[4-[5-(dimethylamino)pentanoylamino]phenyl]carbamothioyl]benzamide, ACETIC ACID, ...
Authors:Hakansson, M, Ladds, M.J.G.W, Walse, B, Lain, S.
Deposit date:2018-05-17
Release date:2019-11-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Exploitation of dihydroorotate dehydrogenase (DHODH) and p53 activation as therapeutic targets: A case study in polypharmacology.
J.Biol.Chem., 295, 2020
6GNE
DownloadVisualize
BU of 6gne by Molmil
Catalytic domain of Starch Synthase IV from Arabidopsis thaliana bound to ADP and acarbose
Descriptor: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Probable starch synthase 4, ...
Authors:Cuesta-Seijo, J.A, Ruzanski, C, Krucewicz, K, Striebeck, A, Palcic, M.M.
Deposit date:2018-05-30
Release date:2018-07-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structures of theCatalyticDomain ofArabidopsis thalianaStarch Synthase IV, of Granule Bound Starch Synthase From CLg1 and of Granule Bound Starch Synthase I ofCyanophora paradoxaIllustrate Substrate Recognition in Starch Synthases.
Front Plant Sci, 9, 2018
6GOL
DownloadVisualize
BU of 6gol by Molmil
Three dimensional structure of a novel influenza hemagglutinin tri-stalk protein
Descriptor: Hemagglutinin tri-stalk
Authors:Kirsteina, A, Kazaks, A, Tars, K.
Deposit date:2018-06-01
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and applications of novel influenza HA tri-stalk protein for evaluation of HA stem-specific immunity.
PLoS ONE, 13, 2018
6GHB
DownloadVisualize
BU of 6ghb by Molmil
Crystal structure of Spx in complex with YjbH (oxidized)
Descriptor: MAGNESIUM ION, Regulatory protein Spx, UPF0413 protein GK0824
Authors:Awad, W, Logan, D.T, von Wachenfeldt, C.
Deposit date:2018-05-06
Release date:2019-04-24
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.104 Å)
Cite:Structural Basis for YjbH Adaptor-Mediated Recognition of Transcription Factor Spx.
Structure, 27, 2019
6GL4
DownloadVisualize
BU of 6gl4 by Molmil
Structure of GluA2o ligand-binding domain (S1S2J) in complex with glutamate and sodium bromide at 1.95 A resolution
Descriptor: ACETATE ION, BROMIDE ION, GLUTAMIC ACID, ...
Authors:Venskutonyte, R, Frydenvang, K, Kastrup, J.S.
Deposit date:2018-05-22
Release date:2019-05-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.948 Å)
Cite:Nanoscale Mobility of the Apo State and TARP Stoichiometry Dictate the Gating Behavior of Alternatively Spliced AMPA Receptors.
Neuron, 102, 2019
6GRN
DownloadVisualize
BU of 6grn by Molmil
CELLOBIOHYDROLASE I (CEL7A) FROM Trichoderma reesei with S-dihydroxypropranolol in the active site
Descriptor: 2-[[(2~{S})-3-naphthalen-1-yloxy-2-oxidanyl-propyl]amino]propane-1,3-diol, 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, ...
Authors:Sandgren, M, Fagerstrom, A, Widmalm, G, Stahlberg, J.
Deposit date:2018-06-11
Release date:2018-10-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Enantioselective Binding of Propranolol and Analogues Thereof to Cellobiohydrolase Cel7A.
Chemistry, 24, 2018
6H0H
DownloadVisualize
BU of 6h0h by Molmil
The ABC transporter associated binding protein from B. animalis subsp. lactis Bl-04 in complex with beta-1,6-galactobiose
Descriptor: DI(HYDROXYETHYL)ETHER, Probable solute binding protein of ABC transporter system for sugars, TETRAETHYLENE GLYCOL, ...
Authors:Fredslund, F, Lo Leggio, L.
Deposit date:2018-07-09
Release date:2019-06-19
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.39 Å)
Cite:Substrate preference of an ABC importer corresponds to selective growth on beta-(1,6)-galactosides inBifidobacterium animalissubsp.lactis.
J.Biol.Chem., 294, 2019
6FJI
DownloadVisualize
BU of 6fji by Molmil
Joint neutron and x-ray crystal structure of human carbonic anhydrase IX mimic (apo).
Descriptor: Carbonic anhydrase 2, ZINC ION
Authors:Fisher, S.Z.
Deposit date:2018-01-22
Release date:2019-02-06
Last modified:2024-05-01
Method:NEUTRON DIFFRACTION (1.6 Å), X-RAY DIFFRACTION
Cite:Using neutron crystallography to elucidate the basis of selective inhibition of carbonic anhydrase by saccharin and a derivative.
J. Struct. Biol., 205, 2019
6H1Z
DownloadVisualize
BU of 6h1z by Molmil
AFGH61B WILD-TYPE
Descriptor: ACETATE ION, COPPER (II) ION, Endoglucanase, ...
Authors:Lo Leggio, L, Poulsen, J.C.N.
Deposit date:2018-07-12
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structure of a lytic polysaccharide monooxygenase from Aspergillus fumigatus and an engineered thermostable variant.
Carbohydr. Res., 469, 2018
6GIV
DownloadVisualize
BU of 6giv by Molmil
Structure of GluA2-N775S ligand-binding domain (S1S2J) in complex with glutamate and Rubidium Bromide at 1.75 A resolution
Descriptor: BROMIDE ION, GLUTAMIC ACID, GLYCEROL, ...
Authors:Venskutonyte, R, Frydenvang, K, Kastrup, J.S.
Deposit date:2018-05-15
Release date:2019-05-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Nanoscale Mobility of the Apo State and TARP Stoichiometry Dictate the Gating Behavior of Alternatively Spliced AMPA Receptors.
Neuron, 102, 2019
6NXV
DownloadVisualize
BU of 6nxv by Molmil
Crystal structure of the theta class glutathione S-transferase from the citrus canker pathogen Xanthomonas axonopodis pv. citri, apo form
Descriptor: CHLORIDE ION, DIMETHYL SULFOXIDE, Glutathione S-transferase
Authors:Hilario, E, De Keyser, S, Fan, L.
Deposit date:2019-02-10
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural and biochemical characterization of a glutathione transferase from the citrus canker pathogen Xanthomonas.
Acta Crystallogr D Struct Biol, 76, 2020
6NV6
DownloadVisualize
BU of 6nv6 by Molmil
Crystal structure of the theta class glutathione S-transferase from the citrus canker pathogen Xanthomonas axonopodis pv. citri with glutathione bound
Descriptor: CHLORIDE ION, GLUTATHIONE, Glutathione S-transferase
Authors:Hilario, E, De Keyser, S, Fan, L.
Deposit date:2019-02-04
Release date:2020-03-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural and biochemical characterization of a glutathione transferase from the citrus canker pathogen Xanthomonas.
Acta Crystallogr D Struct Biol, 76, 2020
4U7G
DownloadVisualize
BU of 4u7g by Molmil
Oxidized quinone reductase 2 in complex with CK2 inhibitor TBBz
Descriptor: 4,5,6,7-TETRABROMO-BENZIMIDAZOLE, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Leung, K.K, Shilton, B.H.
Deposit date:2014-07-30
Release date:2015-02-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Quinone Reductase 2 Is an Adventitious Target of Protein Kinase CK2 Inhibitors TBBz (TBI) and DMAT.
Biochemistry, 54, 2015
4U7F
DownloadVisualize
BU of 4u7f by Molmil
Reduced quinone reductase 2 in complex with CK2 inhibitor DMAT
Descriptor: 4,5,6,7-TETRABROMO-N,N-DIMETHYL-1H-BENZIMIDAZOL-2-AMINE, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Leung, K.K, Shilton, B.H.
Deposit date:2014-07-30
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Quinone Reductase 2 Is an Adventitious Target of Protein Kinase CK2 Inhibitors TBBz (TBI) and DMAT.
Biochemistry, 54, 2015
8AVA
DownloadVisualize
BU of 8ava by Molmil
Leukotriene A4 hydrolase in complex with 4-(4-benzylphenyl)-oxazol-2-amine
Descriptor: 4-[4-(phenylmethyl)phenyl]-1,3-oxazol-2-amine, ACETATE ION, GLYCEROL, ...
Authors:Teder, T, Haeggstrom, J.Z.
Deposit date:2022-08-26
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.354 Å)
Cite:Modulation of the 5-Lipoxygenase Pathway by Chalcogen-Containing Inhibitors of Leukotriene A 4 Hydrolase.
Int J Mol Sci, 24, 2023
8AWH
DownloadVisualize
BU of 8awh by Molmil
Leukotriene A4 hydrolase in complex with 4-(4-Benzylphenyl)-selenazol-2-amine
Descriptor: 4-[4-(phenylmethyl)phenyl]-1,3-selenazol-2-amine, ACETATE ION, GLYCEROL, ...
Authors:Teder, T, Haeggstrom, J.Z.
Deposit date:2022-08-29
Release date:2023-05-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Modulation of the 5-Lipoxygenase Pathway by Chalcogen-Containing Inhibitors of Leukotriene A 4 Hydrolase.
Int J Mol Sci, 24, 2023
6QO1
DownloadVisualize
BU of 6qo1 by Molmil
Crystal structure of Borrelia (Borreliella) burgdorferi outer surface protein BBA69
Descriptor: Putative surface protein
Authors:Brangulis, K, Akopjana, I, Petrovskis, I, Kazaks, A, Tars, K.
Deposit date:2019-02-12
Release date:2019-06-26
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of Borrelia burgdorferi outer surface protein BBA69 in comparison to the paralogous protein CspA.
Ticks Tick Borne Dis, 10, 2019
8B5Q
DownloadVisualize
BU of 8b5q by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UMP
Descriptor: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-MONOPHOSPHATE
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-24
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8B5S
DownloadVisualize
BU of 8b5s by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UDP-glucose
Descriptor: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-DIPHOSPHATE, URIDINE-5'-DIPHOSPHATE-GLUCOSE
Authors:Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
Deposit date:2022-09-24
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023
8BAN
DownloadVisualize
BU of 8ban by Molmil
Secretagogin (mouse) in complex with its target peptide from SNAP-25
Descriptor: CALCIUM ION, Green fluorescent protein,Synaptosomal-associated protein 25, Secretagogin
Authors:Schnell, R, Szodorai, E.
Deposit date:2022-10-11
Release date:2024-04-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A hydrophobic groove in secretagogin allows for alternate interactions with SNAP-25 and syntaxin-4 in endocrine tissues.
Proc.Natl.Acad.Sci.USA, 121, 2024
8BAV
DownloadVisualize
BU of 8bav by Molmil
Secretagogin (human) in complex with its target peptide from SNAP-25
Descriptor: ACETATE ION, CALCIUM ION, Green fluorescent protein,Synaptosomal-associated protein 25, ...
Authors:Schnell, R, Szodorai, E.
Deposit date:2022-10-12
Release date:2024-04-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A hydrophobic groove in secretagogin allows for alternate interactions with SNAP-25 and syntaxin-4 in endocrine tissues.
Proc.Natl.Acad.Sci.USA, 121, 2024
8BSE
DownloadVisualize
BU of 8bse by Molmil
CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD) in complex with 1D1 Fab
Descriptor: 1D1 FAB HEAVY CHAIN, 1D1 FAB LIGHT CHAIN, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Welin, M, Kimbung, Y.R, Focht, D, Pisitkun, T.
Deposit date:2022-11-25
Release date:2023-05-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Efficacy of the combination of monoclonal antibodies against the SARS-CoV-2 Beta and Delta variants.
Plos One, 18, 2023
8BSF
DownloadVisualize
BU of 8bsf by Molmil
CRYSTAL STRUCTURE OF SARS-COV-2 RECEPTOR BINDING DOMAIN (RBD-beta variant) in complex with 3D2 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3D2 FAB HEAVY CHAIN, 3D2 FAB LIGHT CHAIN, ...
Authors:Welin, M, Kimbung, Y.R, Focht, D, Pisitkun, T.
Deposit date:2022-11-25
Release date:2023-05-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Efficacy of the combination of monoclonal antibodies against the SARS-CoV-2 Beta and Delta variants.
Plos One, 18, 2023
1A8Z
DownloadVisualize
BU of 1a8z by Molmil
STRUCTURE DETERMINATION OF A 16.8KDA COPPER PROTEIN RUSTICYANIN AT 2.1A RESOLUTION USING ANOMALOUS SCATTERING DATA WITH DIRECT METHODS
Descriptor: COPPER (I) ION, RUSTICYANIN
Authors:Harvey, I, Hao, Q, Duke, E.M.H, Ingledew, W.J, Hasnain, S.S.
Deposit date:1998-03-30
Release date:1998-06-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure determination of a 16.8 kDa copper protein at 2.1 A resolution using anomalous scattering data with direct methods.
Acta Crystallogr.,Sect.D, 54, 1998

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon