Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2OXP
DownloadVisualize
BU of 2oxp by Molmil
Crystal Structure of Staphylococcal Nuclease mutant V66D/P117G/H124L/S128A
Descriptor: THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Garcia-Moreno, E.B, Gittis, A.G, Karp, D.A.
Deposit date:2007-02-20
Release date:2007-03-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:High apparent dielectric constant inside a protein reflects structural reorganization coupled to the ionization of an internal asp
Biophys.J., 92, 2007
2OZE
DownloadVisualize
BU of 2oze by Molmil
The Crystal structure of Delta protein of pSM19035 from Streptoccocus pyogenes
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MAGNESIUM ION, Orf delta', ...
Authors:Cicek, A, Weihofen, W, Saenger, W.
Deposit date:2007-02-26
Release date:2008-03-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Streptococcus pyogenes pSM19035 requires dynamic assembly of ATP-bound ParA and ParB on parS DNA during plasmid segregation.
Nucleic Acids Res., 36, 2008
6Z0P
DownloadVisualize
BU of 6z0p by Molmil
BceF Tyrosine Kinase Domain
Descriptor: ADENOSINE-5'-DIPHOSPHATE, BceF
Authors:Landau, M, Mayer, M, Abd Alhadi, M, Dvir, H.
Deposit date:2020-05-10
Release date:2021-04-14
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural and Functional Insights into the Biofilm-Associated BceF Tyrosine Kinase Domain from Burkholderia cepacia .
Biomolecules, 11, 2021
6Q8G
DownloadVisualize
BU of 6q8g by Molmil
Structure of Fucosylated D-antimicrobial peptide SB8 in complex with the Fucose-binding lectin PA-IIL at 1.190 Angstrom resolution
Descriptor: 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid, AMINO GROUP, CALCIUM ION, ...
Authors:Baeriswyl, S, Stocker, A, Reymond, J.-L.
Deposit date:2018-12-14
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:X-ray Crystal Structures of Short Antimicrobial Peptides as Pseudomonas aeruginosa Lectin B Complexes.
Acs Chem.Biol., 14, 2019
6QKI
DownloadVisualize
BU of 6qki by Molmil
Native structure of EgtB from Chloracidobacterium thermophilum, a type II sulfoxide synthase
Descriptor: FE (III) ION, Uncharacterized protein
Authors:Stampfli, A.R, Badri, B.N, Schirmer, T, Seebeck, F.P.
Deposit date:2019-01-29
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:An Alternative Active Site Architecture for O2Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum.
J.Am.Chem.Soc., 141, 2019
6Z15
DownloadVisualize
BU of 6z15 by Molmil
Human wtSTING in complex with 3',3'-c-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-05-12
Release date:2021-04-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand Strain and Its Conformational Complexity Is a Major Factor in the Binding of Cyclic Dinucleotides to STING Protein.
Angew.Chem.Int.Ed.Engl., 60, 2021
2P16
DownloadVisualize
BU of 2p16 by Molmil
Factor Xa in Complex with the Inhibitor APIXABAN (BMS-562247) AKA 1-(4-METHOXYPHENYL)-7-OXO-6-(4-(2-OXO-1-PIPERIDINYL)PHENYL)-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3, 4-C]PYRIDINE-3-CARBOXAMIDE
Descriptor: 1-(4-METHOXYPHENYL)-7-OXO-6-[4-(2-OXOPIPERIDIN-1-YL)PHENYL]-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3,4-C]PYRIDINE-3-CARBOXAMIDE, CALCIUM ION, Coagulation factor X (EC 3.4.21.6) (Stuart factor) (Stuart-Prower factor)
Authors:Alexander, R.
Deposit date:2007-03-02
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of 1-(4-Methoxyphenyl)-7-oxo-6-(4-(2-oxopiperidin-1-yl)phenyl)-4,5,6,7-tetrahydro- 1H-pyrazolo[3,4-c]pyridine-3-carboxamide (Apixaban, BMS-562247), a Highly Potent, Selective, Efficacious, and Orally Bioavailable Inhibitor of Blood Coagulation Factor Xa.
J.Med.Chem., 50, 2007
2P4M
DownloadVisualize
BU of 2p4m by Molmil
High pH structure of Rtms5 H146S variant
Descriptor: GFP-like non-fluorescent chromoprotein, IODIDE ION
Authors:Battad, J.M, Wilmann, P.G, Olsen, S, Byres, E, Smith, S.C, Dove, S.G, Turcic, K.N, Devenish, R.J, Rossjohn, J, Prescott, M.
Deposit date:2007-03-12
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A structural basis for the pH-dependent increase in fluorescence efficiency of chromoproteins
J.Mol.Biol., 368, 2007
6ZHV
DownloadVisualize
BU of 6zhv by Molmil
Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic
Descriptor: 2-[2-(2-octoxyethoxy)ethoxy]ethanol, MAGNESIUM ION, Outer membrane porin F, ...
Authors:Sousa, C.F, Morais-Cabral, J, Gameiro, P.
Deposit date:2020-06-23
Release date:2021-05-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.945 Å)
Cite:Crystal structure of OmpF porin soaked in ciprofloxacin metaloantibiotic
To Be Published
2P7V
DownloadVisualize
BU of 2p7v by Molmil
Crystal structure of the Escherichia coli regulator of sigma 70, Rsd, in complex with sigma 70 domain 4
Descriptor: MAGNESIUM ION, RNA polymerase sigma factor rpoD, Regulator of sigma D
Authors:Patikoglou, G.A, Westblade, L.F, Campbell, E.A, Lamour, V, Lane, W.J, Darst, S.A.
Deposit date:2007-03-20
Release date:2007-08-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the Escherichia coli regulator of sigma70, Rsd, in complex with sigma70 domain 4.
J.Mol.Biol., 372, 2007
6YYK
DownloadVisualize
BU of 6yyk by Molmil
Crystal Structure of 1,5-dimethylindoline-2,3-dione covalently bound to the PH domain of Bruton's tyrosine kinase mutant R28C
Descriptor: 1,5-dimethyl-3~{H}-indol-2-one, MAGNESIUM ION, Tyrosine-protein kinase BTK, ...
Authors:Brear, P, Wagstaff, J, Hyvonen, M.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Optimising crystallographic systems for structure-guided drug discovery
To Be Published
2P9S
DownloadVisualize
BU of 2p9s by Molmil
Structure of bovine Arp2/3 complex co-crystallized with ATP/Mg2+
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-like protein 2, Actin-like protein 3, ...
Authors:Nolen, B.J, Pollard, T.D.
Deposit date:2007-03-26
Release date:2007-05-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Insights into the Influence of Nucleotides on Actin Family Proteins from Seven Structures of Arp2/3 Complex.
Mol.Cell, 26, 2007
6YYF
DownloadVisualize
BU of 6yyf by Molmil
Crystal Structure of 5-chloroindoline-2,3-dione covalently bound to the PH domain of Bruton's tyrosine kinase mutant R28C
Descriptor: 5-chloranyl-1,3-dihydroindol-2-one, MAGNESIUM ION, Tyrosine-protein kinase BTK, ...
Authors:Brear, P, Wagstaff, J, Hyvonen, M.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Optimising crystallographic systems for structure-guided drug discovery
To Be Published
2P7T
DownloadVisualize
BU of 2p7t by Molmil
Crystal Structure of KcsA mutant
Descriptor: (1S)-2-HYDROXY-1-[(NONANOYLOXY)METHYL]ETHYL MYRISTATE, FAB-A, FAB-B, ...
Authors:Cordero-Morales, J.F, Vishwanath, J, Lewis, A, Valeria, V.R, Cortes, D.M, Roux, B, Perozo, E.
Deposit date:2007-03-20
Release date:2007-10-09
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of KcsA mutant
To be Published
2PD7
DownloadVisualize
BU of 2pd7 by Molmil
2.0 Angstrom Crystal Structure of the Fungal Blue-Light Photoreceptor Vivid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Vivid PAS protein VVD
Authors:Zoltowski, B.D, Crane, B.R, Bilwes, A.M.
Deposit date:2007-03-31
Release date:2007-06-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational switching in the fungal light sensor Vivid
Science, 316, 2007
2P8O
DownloadVisualize
BU of 2p8o by Molmil
Crystal Structure of a Benzohydroxamic Acid/Vanadate complex bound to chymotrypsin A
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Moulin, A, Bell, J.H, Pratt, R.F, Ringe, D.
Deposit date:2007-03-22
Release date:2007-05-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Inhibition of chymotrypsin by a complex of ortho-vanadate and benzohydroxamic Acid: structure of the inert complex and its mechanistic interpretation.
Biochemistry, 46, 2007
6YYG
DownloadVisualize
BU of 6yyg by Molmil
Crystal Structure of 5-(trifluoromethoxy)indoline-2,3-dione covalently bound to the PH domain of Bruton's tyrosine kinase mutant R28C
Descriptor: 5-(trifluoromethyloxy)-1,3-dihydroindol-2-one, MAGNESIUM ION, Tyrosine-protein kinase BTK, ...
Authors:Brear, P, Wagstaff, J, Hyvonen, M.
Deposit date:2020-05-05
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Optimising crystallographic systems for structure-guided drug discovery
To Be Published
2PEE
DownloadVisualize
BU of 2pee by Molmil
Crystal Structure of a Thermophilic Serpin, Tengpin, in the Native State
Descriptor: GLYCEROL, SULFATE ION, Serine protease inhibitor
Authors:Zhang, Q.W, Buckle, A.M, Whisstock, J.C.
Deposit date:2007-04-02
Release date:2007-06-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The N terminus of the serpin, tengpin, functions to trap the metastable native state.
Embo Rep., 8, 2007
7RT9
DownloadVisualize
BU of 7rt9 by Molmil
Crystal structures of human PYY and NPY
Descriptor: 4A3B2-A Fab heavy chain, 4A3B2-A Fab light chain, GLYCEROL, ...
Authors:Langley, D.B, Christ, D.
Deposit date:2021-08-12
Release date:2022-03-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of human neuropeptide Y (NPY) and peptide YY (PYY).
Neuropeptides, 92, 2022
6JND
DownloadVisualize
BU of 6jnd by Molmil
Cryo-EM structure of glutamate dehydrogenase from Thermococcus profundus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Glutamate dehydrogenase
Authors:Oide, M, Kato, T, Oroguchi, T, Nakasako, M.
Deposit date:2019-03-14
Release date:2020-02-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Energy landscape of domain motion in glutamate dehydrogenase deduced from cryo-electron microscopy.
Febs J., 287, 2020
6YWB
DownloadVisualize
BU of 6ywb by Molmil
Human wtSTING in complex with 3',3'-c-[2'FdAMP-2'FdAM(PS)]
Descriptor: 3',3'-c-[2'FdAMP-2'FdAM(PS)], Stimulator of interferon protein
Authors:Boura, E, Smola, M.
Deposit date:2020-04-29
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.503 Å)
Cite:Human wtSTING in complex with 3',3'-c-[2'FdAMP-2'FdAM(PS)]
To Be Published
2OSN
DownloadVisualize
BU of 2osn by Molmil
An alternate description of a crystal structure of phospholipase A2 from Bungarus caeruleus
Descriptor: CHLORIDE ION, Phospholipase A2 isoform 3
Authors:Stenkamp, R.E, Le Trong, I.
Deposit date:2007-02-06
Release date:2007-03-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:An alternate description of two crystal structures of phospholipase A(2) from Bungarus caeruleus.
Acta Crystallogr.,Sect.D, 63, 2007
6YZH
DownloadVisualize
BU of 6yzh by Molmil
Crystal structure of P8C9 bound to CK2alpha
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Casein kinase II subunit alpha, GLYCEROL, ...
Authors:Atkinson, E, Iegre, J, Brear, P, Baker, D, Sore, H, Hyvonen, M, Spring, D.
Deposit date:2020-05-07
Release date:2021-05-19
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Development of small cyclic peptides targeting the CK2 alpha / beta interface.
Chem.Commun.(Camb.), 58, 2022
6Q6M
DownloadVisualize
BU of 6q6m by Molmil
RORCVAR2 (RORGT, 264-499) IN COMPLEX WITH COMPOUND 1: Identification of N-aryl imidazoles as potent and selective RORgt inhibitors
Descriptor: Nuclear receptor ROR-gamma, ethyl (2~{S})-2-[(2-chloranyl-6-methyl-phenyl)-thiophen-2-ylcarbonyl-amino]propanoate
Authors:Kallen, J.
Deposit date:2018-12-11
Release date:2019-11-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure-Based and Property-Driven Optimization ofN-Aryl Imidazoles toward Potent and Selective Oral ROR gamma t Inhibitors.
J.Med.Chem., 62, 2019
6QKJ
DownloadVisualize
BU of 6qkj by Molmil
EgtB from Chloracidobacterium thermophilum, a type II sulfoxide synthase in complex with N,N,N-trimethyl-histidine
Descriptor: CHLORIDE ION, FE (III) ION, IMIDAZOLE, ...
Authors:Stampfli, A.R, Badri, B.N, Schirmer, T, Seebeck, F.P.
Deposit date:2019-01-29
Release date:2019-03-27
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An Alternative Active Site Architecture for O2Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum.
J.Am.Chem.Soc., 141, 2019

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon