Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5KSS
DownloadVisualize
BU of 5kss by Molmil
Stationary phase survival protein E (SurE) from Xylella fastidiosa - XFSurE-Ds (Dimer Smaller)
Descriptor: 5'-nucleotidase SurE, CHLORIDE ION, IODIDE ION, ...
Authors:Machado, A.T.P, Fonseca, E.M.B, Dos Reis, M.A, Saraiva, A.M, Dos Santos, C.A, De Toledo, A.M.S, Polikarpov, I, De Souza, A.P, Aparicio, R, Iulek, J.
Deposit date:2016-07-09
Release date:2017-07-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Conformational variability of the stationary phase survival protein E from Xylella fastidiosa revealed by X-ray crystallography, small-angle X-ray scattering studies, and normal mode analysis.
Proteins, 85, 2017
8CXH
DownloadVisualize
BU of 8cxh by Molmil
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Descriptor: Ankyrin repeat family A protein 2,Envelope E protein, C10 heavy chain, C10 light chain, ...
Authors:Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H.
Deposit date:2022-05-21
Release date:2023-06-07
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
To Be Published
8CXG
DownloadVisualize
BU of 8cxg by Molmil
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Descriptor: Ankyrin repeat family A protein 2,Envelope E protein, C8 scFv heavy chain, C8 scFv light chain, ...
Authors:Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H.
Deposit date:2022-05-21
Release date:2023-06-07
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
To Be Published
8CXI
DownloadVisualize
BU of 8cxi by Molmil
Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
Descriptor: A11 heavy chain, A11 light chain, Ankyrin repeat family A protein 2,Envelope E protein, ...
Authors:Liu, W, Zhang, X.K, Gong, D.Y, Dai, X.H, Sharma, A, Zhang, T.H, Rey, F, Zhou, Z.H.
Deposit date:2022-05-21
Release date:2023-06-07
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structures of Zika Virus in Complex with Antibodies Targeting E Dimer Epitopes and Basis for Neutralization Efficacy
To Be Published
5L4O
DownloadVisualize
BU of 5l4o by Molmil
Structure of an E.coli initiator tRNAfMet A1-U72 variant
Descriptor: SODIUM ION, tRNA (76-MER)
Authors:Monestier, A, Schmitt, E, Mechulam, Y.
Deposit date:2016-05-26
Release date:2017-03-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:The structure of an E. coli tRNAf(Met) A1-U72 variant shows an unusual conformation of the A1-U72 base pair.
RNA, 23, 2017
5K06
DownloadVisualize
BU of 5k06 by Molmil
Recombinant bovine beta-lactoglobulin with uncleaved N-terminal methionine (rBlgB)
Descriptor: Beta-lactoglobulin, GLYCEROL, MYRISTIC ACID, ...
Authors:Loch, J.I, Bonarek, P, Tworzydlo, M, Polit, A, Hawro, B, Lach, A, Ludwin, E, Lewinski, K.
Deposit date:2016-05-17
Release date:2016-07-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Engineered beta-Lactoglobulin Produced in E. coli: Purification, Biophysical and Structural Characterisation.
Mol Biotechnol., 58, 2016
8R7F
DownloadVisualize
BU of 8r7f by Molmil
Transcription factor BARHL2 homodimer with spacing two bp
Descriptor: BarH-like 2 homeobox protein, DNA (5'-D(*CP*TP*AP*AP*AP*CP*GP*GP*GP*CP*AP*AP*TP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*AP*TP*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*G)-3')
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-11-24
Release date:2024-12-04
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:DNA-guided transcription factor interactions extend human gene regulatory code.
Nature, 641, 2025
8R7Z
DownloadVisualize
BU of 8r7z by Molmil
transcription factor BARHL2 homodimer with spacing four bp
Descriptor: BarH-like 2 homeobox protein, DNA (5'-D(P*AP*CP*CP*GP*TP*TP*TP*AP*G)-3'), DNA (5'-D(P*CP*TP*AP*AP*AP*CP*GP*GP*T)-3'), ...
Authors:Morgunova, E, Popov, A, Yin, Y, Taipale, J.
Deposit date:2023-11-27
Release date:2024-12-04
Last modified:2025-06-11
Method:X-RAY DIFFRACTION (3.26 Å)
Cite:DNA-guided transcription factor interactions extend human gene regulatory code.
Nature, 641, 2025
1LTB
DownloadVisualize
BU of 1ltb by Molmil
2.6 ANGSTROMS CRYSTAL STRUCTURE OF PARTIALLY-ACTIVATED E. COLI HEAT-LABILE ENTEROTOXIN (LT)
Descriptor: HEAT-LABILE ENTEROTOXIN, SUBUNIT A, SUBUNIT B
Authors:Merritt, E.A, Sixma, T.K, Hol, W.G.J.
Deposit date:1993-09-15
Release date:1994-01-31
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of partially-activated E. coli heat-labile enterotoxin (LT) at 2.6 A resolution.
FEBS Lett., 337, 1994
6OPL
DownloadVisualize
BU of 6opl by Molmil
Human biliverdin IX beta reductase Q14R mutant: NADP complex
Descriptor: Flavin reductase (NADPH), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Paukovich, N.A, Eisenmesser, E.Z.
Deposit date:2019-04-25
Release date:2020-04-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Controlling biliverdin reductase B coenzyme binding through evolution
To Be Published
9JIG
DownloadVisualize
BU of 9jig by Molmil
Hepatitis E virus capsid protein E2s domain (genotype IV) in complex with Fab C6
Descriptor: C6 Fab heavy chain, C6 Fab light chain, Pro-secreted protein ORF2
Authors:Liu, L, Zheng, Q, Li, S.
Deposit date:2024-09-11
Release date:2025-07-23
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Antibodies elicited by hepatitis E vaccination in humans confer cross-genus protection against rat hepatitis E virus.
J Hepatol, 2025
9JIO
DownloadVisualize
BU of 9jio by Molmil
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab H4
Descriptor: H4 Fab heavy chain, H4 Fab light chain, Secreted protein ORF2
Authors:Liu, L, Zheng, Q, Li, S.
Deposit date:2024-09-12
Release date:2025-07-23
Method:ELECTRON MICROSCOPY (2.87 Å)
Cite:Antibodies elicited by hepatitis E vaccination in humans confer cross-genus protection against rat hepatitis E virus.
J Hepatol, 2025
9JIF
DownloadVisualize
BU of 9jif by Molmil
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C6
Descriptor: C6 Fab heavy chain, C6 Fab light chain, Secreted protein ORF2
Authors:Liu, L, Zheng, Q, Li, S.
Deposit date:2024-09-11
Release date:2025-07-23
Method:ELECTRON MICROSCOPY (2.79 Å)
Cite:Antibodies elicited by hepatitis E vaccination in humans confer cross-genus protection against rat hepatitis E virus.
J Hepatol, 2025
9JIJ
DownloadVisualize
BU of 9jij by Molmil
Hepatitis E virus capsid protein E2s domain (genotype I) in complex with Fab C158
Descriptor: C158 Fab heavy chain, C158 Fab light chain, Secreted protein ORF2
Authors:Liu, L, Zheng, Q, Li, S.
Deposit date:2024-09-11
Release date:2025-07-23
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:Antibodies elicited by hepatitis E vaccination in humans confer cross-genus protection against rat hepatitis E virus.
J Hepatol, 2025
9FNS
DownloadVisualize
BU of 9fns by Molmil
Cryo-EM structure of the P domain of the Hepatitis E Virus ORF2 protein in complex with Fab ES1.327
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Secreted protein ORF2, human IgG antibody ES1.327 - Fab Light chain, ...
Authors:Baquero, E, Molinos, L, Mouquet, H.
Deposit date:2024-06-11
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for the neutralization of Hepatitis E virus by human monoclonal antibodies
To Be Published
5JOQ
DownloadVisualize
BU of 5joq by Molmil
Crystal Structure of an ABC Transporter Substrate-Binding Protein from Listeria monocytogenes EGD-e
Descriptor: CHLORIDE ION, CITRIC ACID, Lmo2184 protein
Authors:Brunzelle, J.S, Wawrzak, Z, Kudritska, M, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-05-02
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal Structure of an ABC Transporter Substrate-Binding Protein from Listeria monocytogenes EGD-e
To Be Published
6HPB
DownloadVisualize
BU of 6hpb by Molmil
Crystal structure of the E.coli HicAB toxin-antitoxin complex
Descriptor: Antitoxin HicB, SULFATE ION, mRNA interferase toxin HicA
Authors:Manav, M.C, Brodersen, D.E.
Deposit date:2018-09-20
Release date:2019-09-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019
7BH8
DownloadVisualize
BU of 7bh8 by Molmil
3H4-Fab HLA-E-VL9 co-complex
Descriptor: 3H4 Fab heavy chain, 3H4 Fab light chain, Beta-2-microglobulin, ...
Authors:Walters, L.C, Rozbesky, D.
Deposit date:2021-01-10
Release date:2022-04-13
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Mouse and human antibodies bind HLA-E-leader peptide complexes and enhance NK cell cytotoxicity.
Commun Biol, 5, 2022
6HMR
DownloadVisualize
BU of 6hmr by Molmil
Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azothiazole-based inhibitor (compound 2)
Descriptor: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[4-(4-fluorophenyl)-2-[(~{E})-phenyldiazenyl]-1,3-thiazol-5-yl]pyridin-2-yl]propanamide, Casein kinase I isoform delta, MALONIC ACID
Authors:Pichlo, C, Schehr, M, Charl, J, Brunstein, E, Peifer, C, Baumann, U.
Deposit date:2018-09-12
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.782 Å)
Cite:2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
4ZT1
DownloadVisualize
BU of 4zt1 by Molmil
Crystal structure of human E-Cadherin (residues 3-213) in x-dimer conformation
Descriptor: CALCIUM ION, Cadherin-1
Authors:Nardone, V, Lucarelli, A.P, Dalle Vedove, A, Parisini, E.
Deposit date:2015-05-14
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal Structure of Human E-Cadherin-EC1EC2 in Complex with a Peptidomimetic Competitive Inhibitor of Cadherin Homophilic Interaction.
J.Med.Chem., 59, 2016
4ZTE
DownloadVisualize
BU of 4zte by Molmil
Crystal structure of human E-Cadherin (residues 3-213) in complex with a peptidomimetic inhibitor
Descriptor: CALCIUM ION, Cadherin-1, N-{[(2S,5S)-1-benzyl-5-(2-{[(2S,3S)-1-(tert-butylamino)-3-methyl-1-oxopentan-2-yl]amino}-2-oxoethyl)-3,6-dioxopiperazin-2-yl]methyl}-L-alpha-asparagine
Authors:Nardone, V, Lucarelli, A.P, Dalle Vedove, A, Parisini, E.
Deposit date:2015-05-14
Release date:2016-06-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Crystal Structure of Human E-Cadherin-EC1EC2 in Complex with a Peptidomimetic Competitive Inhibitor of Cadherin Homophilic Interaction.
J.Med.Chem., 59, 2016
1MBB
DownloadVisualize
BU of 1mbb by Molmil
OXIDOREDUCTASE
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, URIDINE DIPHOSPHO-N-ACETYLENOLPYRUVYLGLUCOSAMINE REDUCTASE, URIDINE-DIPHOSPHATE-3(N-ACETYLGLUCOSAMINYL)BUTYRIC ACID
Authors:Benson, T.E, Lees, W.J, Walsh, C.T, Hogle, J.M.
Deposit date:1995-11-07
Release date:1996-10-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:(E)-enolbutyryl-UDP-N-acetylglucosamine as a mechanistic probe of UDP-N-acetylenolpyruvylglucosamine reductase (MurB).
Biochemistry, 35, 1996
6HMP
DownloadVisualize
BU of 6hmp by Molmil
Crystal structure of human Casein Kinase I delta in complex with a photoswitchable 2-Azoimidazole-based Inhibitor (compound 3)
Descriptor: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[5-(4-fluorophenyl)-2-[(~{E})-(4-fluorophenyl)diazenyl]-3-methyl-imidazol-4-yl]pyridin-2-yl]propanamide, Casein kinase I isoform delta, PHOSPHATE ION
Authors:Pichlo, C, Schehr, M, Charl, J, Brunstein, E, Peifer, C, Baumann, U.
Deposit date:2018-09-12
Release date:2019-09-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
6FK0
DownloadVisualize
BU of 6fk0 by Molmil
Xray structure of domain-swapped cystatin E dimer
Descriptor: Cystatin-M
Authors:Dall, E, Brandstetter, H.
Deposit date:2018-01-23
Release date:2018-07-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and functional analysis of cystatin E reveals enzymologically relevant dimer and amyloid fibril states.
J. Biol. Chem., 293, 2018
6HPC
DownloadVisualize
BU of 6hpc by Molmil
Crystal structure of the HicB antitoxin from E. coli
Descriptor: Antitoxin HicB
Authors:Manav, M.C, Brodersen, D.E.
Deposit date:2018-09-20
Release date:2019-09-18
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:The E. coli HicB Antitoxin Contains a Structurally Stable Helix-Turn-Helix DNA Binding Domain.
Structure, 27, 2019

243531

数据于2025-10-22公开中

PDB statisticsPDBj update infoContact PDBjnumon