PDB: 72960 resultsInfo pagesStatus searchChemie searchBIRD

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8K0R	The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric post cleavge state Descriptor: DNA, MAGNESIUM ION, RNA (542-MER) Authors: Zhu, H.Z, Liu, J.J.G. Deposit date: 2023-07-10 Release date: 2024-05-15 Method: ELECTRON MICROSCOPY (2.65 Å) Cite: Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage. Science, 383, 2024
8K15	The Streptococcus azizii ORF-less Group IIC intron HYER2 at apo state Descriptor: MAGNESIUM ION, RNA (470-MER) Authors: Zhu, H.Z, Liu, J.J.G. Deposit date: 2023-07-10 Release date: 2024-05-15 Method: ELECTRON MICROSCOPY (2.58 Å) Cite: Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage. Science, 383, 2024
1B3S	STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE Descriptor: PROTEIN (BARNASE), PROTEIN (BARSTAR) Authors: Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-12-01 Release date: 1998-12-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Structural response to mutation at a protein-protein interface. J.Mol.Biol., 286, 1999
1B2S	STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE Descriptor: PROTEIN (BARNASE), PROTEIN (BARSTAR), SULFATE ION Authors: Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-11-30 Release date: 1998-12-08 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Structural response to mutation at a protein-protein interface. J.Mol.Biol., 286, 1999
8K0S	The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 with 10-nt TRS at symmetric apo state Descriptor: MAGNESIUM ION, RNA (543-MER) Authors: Zhu, H.Z, Liu, J.J.G. Deposit date: 2023-07-10 Release date: 2024-05-01 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (3.41 Å) Cite: Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage. Science, 383, 2024
8K0Q	The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric pre-cleavage state Descriptor: DNA, MAGNESIUM ION, RNA (542-MER) Authors: Zhu, H.Z, Liu, J.J.G. Deposit date: 2023-07-10 Release date: 2024-05-15 Method: ELECTRON MICROSCOPY (3.14 Å) Cite: Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage. Science, 383, 2024
8K0P	The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric apo state Descriptor: MAGNESIUM ION, RNA (542-MER) Authors: Zhu, H.Z, Liu, J.J.G. Deposit date: 2023-07-10 Release date: 2024-05-15 Method: ELECTRON MICROSCOPY (2.99 Å) Cite: Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage. Science, 383, 2024
7BJS	Crystal structure of Khc/atypical Tm1 complex Descriptor: Kinesin heavy chain, SD21996p Authors: Dimitrova-Paternoga, L, Jagtap, P.K.A, Ephrussi, A, Hennig, J. Deposit date: 2021-01-14 Release date: 2021-05-26 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.28 Å) Cite: Molecular basis of mRNA transport by a kinesin-1-atypical tropomyosin complex. Genes Dev., 35, 2021
7BJN	Crystal structure of atypical Tm1 (Tm1-I/C), residues 270-334 Descriptor: SD21996p Authors: Dimitrova-Paternoga, L, Jagtap, P.K.A, Ephrussi, A, Hennig, J. Deposit date: 2021-01-14 Release date: 2021-05-26 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Molecular basis of mRNA transport by a kinesin-1-atypical tropomyosin complex. Genes Dev., 35, 2021
1MRE	PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES Descriptor: GUANOSINE-5'-DIPHOSPHATE, IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), ... Authors: Pokkuluri, P.R, Cygler, M. Deposit date: 1994-06-13 Release date: 1995-02-14 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes. J.Mol.Biol., 243, 1994
6FMB	Crystal structure of the BEC1054 RNase-like effector from the fungal pathogen Blumeria graminis Descriptor: CSEP0064 putative effector protein Authors: Jones, R, Garnett, J, Spanu, P.D, Cota, E. Deposit date: 2018-01-30 Release date: 2018-06-20 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Crystal structure of the BEC1054 RNase-like effector from the fungal pathogen Blumeria graminis Biorxiv, 2018
1B27	STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE Descriptor: PROTEIN (BARNASE), PROTEIN (BARSTAR) Authors: Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-12-04 Release date: 1998-12-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural response to mutation at a protein-protein interface. J.Mol.Biol., 286, 1999
6IB8	Structure of a complex of SuhB and NusA AR2 domain Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, Inositol-1-monophosphatase, ... Authors: Huang, Y.H, Loll, B, Wahl, M.C. Deposit date: 2018-11-29 Release date: 2019-04-17 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.646 Å) Cite: Structural basis for the function of SuhB as a transcription factor in ribosomal RNA synthesis. Nucleic Acids Res., 47, 2019
5AN4	Crystal structure of the human 8-oxoguanine glycosylase (OGG1) processed with the CrystalDirect automated mounting and cryo-cooling technology Descriptor: N-GLYCOSYLASE/DNA LYASE, SULFATE ION Authors: Zander, U, Ytre-Arne, M, Dalhus, B, Hoffmann, G, Cornaciu, I, Cipriani, F, Marquez, J.A. Deposit date: 2015-09-04 Release date: 2016-04-13 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Automated Harvesting and Processing of Protein Crystals Through Laser Photoablation. Acta Crystallogr.,Sect.D, 72, 2016
1MRC	PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES Descriptor: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ... Authors: Pokkuluri, P.R, Cygler, M. Deposit date: 1994-06-13 Release date: 1995-02-14 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes. J.Mol.Biol., 243, 1994
1MRD	PREPARATION, CHARACTERIZATION AND CRYSTALLIZATION OF AN ANTIBODY FAB FRAGMENT THAT RECOGNIZES RNA. CRYSTAL STRUCTURES OF NATIVE FAB AND THREE FAB-MONONUCLEOTIDE COMPLEXES Descriptor: IGG2B-KAPPA JEL103 FAB (HEAVY CHAIN), IGG2B-KAPPA JEL103 FAB (LIGHT CHAIN), IMIDAZOLE, ... Authors: Pokkuluri, P.R, Cygler, M. Deposit date: 1994-06-13 Release date: 1995-02-14 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Preparation, characterization and crystallization of an antibody Fab fragment that recognizes RNA. Crystal structures of native Fab and three Fab-mononucleotide complexes. J.Mol.Biol., 243, 1994
1LN4	CRYSTAL STRUCTURE OF E. COLI YHBY Descriptor: Hypothetical protein yhbY Authors: Ostheimer, G.J, Barkan, A, Matthews, B.W. Deposit date: 2002-05-02 Release date: 2002-05-15 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins Structure, 10, 2002
1B2U	STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE Descriptor: PROTEIN (BARNASE), PROTEIN (BARSTAR) Authors: Vaughan, C.K, Buckle, A.M, Fersht, A.R. Deposit date: 1998-12-01 Release date: 1998-12-09 Last modified: 2023-08-09 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural response to mutation at a protein-protein interface. J.Mol.Biol., 286, 1999
3LPH	Crystal structure of the HIV-1 Rev dimer Descriptor: BROMIDE ION, MALONATE ION, Protein Rev, ... Authors: Daugherty, M.D. Deposit date: 2010-02-05 Release date: 2010-12-08 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for cooperative RNA binding and export complex assembly by HIV Rev. Nat.Struct.Mol.Biol., 17, 2010
2XSF	Crystal structure of the RRM domain of mouse Deleted in azoospermia- like Descriptor: DELETED IN AZOOSPERMIA-LIKE, GLYCEROL, SULFATE ION Authors: Jenkins, H.T, Edwards, T.A. Deposit date: 2010-09-28 Release date: 2011-10-05 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Kinked Beta-Strands Mediate High-Affinity Recognition of Mrna Targets by the Germ-Cell Regulator Dazl Proc.Natl.Acad.Sci.USA, 108, 2011
5W1T	X-ray crystal structure of Escherichia coli RNA polymerase and DksA complex Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... Authors: Murakami, K.S, Molodtsov, V. Deposit date: 2017-06-04 Release date: 2017-06-14 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (4.5 Å) Cite: Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA. Mol. Cell, 69, 2018
4KB7	HCV NS5B GT1B N316Y with CMPD 32 Descriptor: 5-cyclopropyl-2-(4-fluorophenyl)-6-[{2-[(3R)-1-hydroxy-1,3-dihydro-2,1-benzoxaborol-3-yl]ethyl}(methylsulfonyl)amino]-N-methyl-1-benzofuran-3-carboxamide, HCV Polymerase Authors: Williams, S.P, Kahler, K.M, Shotwell, J.B. Deposit date: 2013-04-23 Release date: 2013-05-08 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Discovery of a Potent Boronic Acid Derived Inhibitor of the HCV RNA-Dependent RNA Polymerase. J.Med.Chem., 57, 2014
6UF1	Pistol ribozyme transition-state analog vanadate Descriptor: MANGANESE (II) ION, RNA (5'-R(*UP*CP*UP*GP*CP*UP*CP*UP*CP*(GVA)*UP*CP*CP*AP*A)-3'), RNA (50-MER) Authors: Teplova, M, Falschlunger, C, Krasheninina, O, Patel, D.J, Micura, R. Deposit date: 2019-09-23 Release date: 2019-12-18 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Crucial Roles of Two Hydrated Mg2+Ions in Reaction Catalysis of the Pistol Ribozyme. Angew.Chem.Int.Ed.Engl., 59, 2020
8T66	cA6 bound Cam1 Descriptor: Cam1, RNA (5'-R(P*AP*AP*AP*AP*A)-3') Authors: Yu, Y, Patel, D.J. Deposit date: 2023-06-15 Release date: 2024-01-10 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: The CRISPR effector Cam1 mediates membrane depolarization for phage defence. Nature, 625, 2024
8T65	cA4 bound Cam1 Descriptor: Cam1, RNA (5'-R(P*AP*AP*AP*A)-3') Authors: Yu, Y, Patel, D.J. Deposit date: 2023-06-15 Release date: 2024-01-10 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.09 Å) Cite: The CRISPR effector Cam1 mediates membrane depolarization for phage defence. Nature, 625, 2024

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