Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SWC
DownloadVisualize
BU of 6swc by Molmil
IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi
Descriptor: 16S ribosomal rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Coureux, P.-D, Mechulam, Y, Schmitt, E.
Deposit date:2019-09-20
Release date:2020-02-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation.
Commun Biol, 3, 2020
6SWD
DownloadVisualize
BU of 6swd by Molmil
IC2 body model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssi
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
Authors:Coureux, P.-D, Mechulam, Y, Schmitt, E.
Deposit date:2019-09-20
Release date:2020-02-19
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM study of an archaeal 30S initiation complex gives insights into evolution of translation initiation.
Commun Biol, 3, 2020
6SWZ
DownloadVisualize
BU of 6swz by Molmil
Structure of the C-terminal domain of C. glutamicum mycoloyltransferase A
Descriptor: GLYCEROL, Protein PS1
Authors:Li de la Sierra-Gallay, I, Van tilbeurgh, H, Bayan, N.
Deposit date:2019-09-24
Release date:2020-03-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.995 Å)
Cite:The C-terminal domain of Corynebacterium glutamicum mycoloyltransferase A is composed of five repeated motifs involved in cell wall binding and stability.
Mol.Microbiol., 114, 2020
6SX4
DownloadVisualize
BU of 6sx4 by Molmil
Structure of C. glutamicum mycoloyltransferase A
Descriptor: ACETATE ION, Protein PS1
Authors:Li de la Sierra-Gallay, I, Van tilbeurgh, H, Bayan, N.
Deposit date:2019-09-24
Release date:2020-03-04
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:The C-terminal domain of Corynebacterium glutamicum mycoloyltransferase A is composed of five repeated motifs involved in cell wall binding and stability.
Mol.Microbiol., 114, 2020
6SXL
DownloadVisualize
BU of 6sxl by Molmil
Crystal structure of CrtE
Descriptor: Geranylgeranyl pyrophosphate synthase, PHOSPHATE ION
Authors:Feng, Y, Morgan, R.M.L, Nixon, P.J.
Deposit date:2019-09-26
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Geranylgeranyl Pyrophosphate Synthase (CrtE) Involved in Cyanobacterial Terpenoid Biosynthesis.
Front Plant Sci, 11, 2020
6SXN
DownloadVisualize
BU of 6sxn by Molmil
Crystal structure of P212121 apo form of CrtE
Descriptor: Geranylgeranyl pyrophosphate synthase
Authors:Feng, Y, Morgan, R.M.L, Nixon, P.J.
Deposit date:2019-09-26
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Crystal Structure of Geranylgeranyl Pyrophosphate Synthase (CrtE) Involved in Cyanobacterial Terpenoid Biosynthesis.
Front Plant Sci, 11, 2020
6T36
DownloadVisualize
BU of 6t36 by Molmil
Crystal structure of the PTPN3 PDZ domain bound to the HBV core protein C-terminal peptide
Descriptor: BROMIDE ION, Capsid protein, Tyrosine-protein phosphatase non-receptor type 3
Authors:Genera, M, Mechaly, A, Haouz, A, Caillet-Saguy, C.
Deposit date:2019-10-10
Release date:2021-01-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Molecular basis of the interaction of the human tyrosine phosphatase PTPN3 with the hepatitis B virus core protein.
Sci Rep, 11, 2021
6T39
DownloadVisualize
BU of 6t39 by Molmil
Crystal structure of rsEGFP2 in its off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6T3A
DownloadVisualize
BU of 6t3a by Molmil
Difference-refined structure of rsEGFP2 10 ns following 400-nm laser irradiation of the off-state determined by SFX
Descriptor: Green fluorescent protein
Authors:Woodhouse, J, Coquelle, N, Adam, V, Barends, T.R.M, De La Mora, E, Bourgeois, D, Colletier, J.P, Schlichting, I, Weik, M.
Deposit date:2019-10-10
Release date:2020-02-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Photoswitching mechanism of a fluorescent protein revealed by time-resolved crystallography and transient absorption spectroscopy.
Nat Commun, 11, 2020
6T4Q
DownloadVisualize
BU of 6t4q by Molmil
Structure of yeast 80S ribosome stalled on the CGA-CCG inhibitory codon combination.
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Tesina, P, Buschauer, R, Cheng, J, Berninghausen, O, Becker, R, Beckmann, R.
Deposit date:2019-10-14
Release date:2019-12-25
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
Embo J., 39, 2020
6T7I
DownloadVisualize
BU of 6t7i by Molmil
Structure of yeast 80S ribosome stalled on the CGA-CGA inhibitory codon combination.
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
Authors:Tesina, P, Buschauer, R, Cheng, J, Berninghausen, O, Becker, R, Beckmann, R.
Deposit date:2019-10-22
Release date:2019-12-25
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
Embo J., 39, 2020
6T7T
DownloadVisualize
BU of 6t7t by Molmil
Structure of yeast 80S ribosome stalled on poly(A) tract.
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Tesina, P, Buschauer, R, Cheng, J, Berninghausen, O, Becker, R, Beckmann, R.
Deposit date:2019-10-23
Release date:2019-12-25
Last modified:2020-02-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
Embo J., 39, 2020
6T83
DownloadVisualize
BU of 6t83 by Molmil
Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ...
Authors:Tesina, P, Buschauer, R, Cheng, J, Berninghausen, O, Becker, R, Beckmann, R.
Deposit date:2019-10-24
Release date:2019-12-25
Last modified:2020-02-12
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Molecular mechanism of translational stalling by inhibitory codon combinations and poly(A) tracts.
Embo J., 39, 2020
6T90
DownloadVisualize
BU of 6t90 by Molmil
OCT4-SOX2-bound nucleosome - SHL-6
Descriptor: DNA (146-MER), Green fluorescent protein,POU domain, class 5, ...
Authors:Michael, A.K, Kempf, G, Cavadini, S, Bunker, R.D, Thoma, N.H.
Deposit date:2019-10-25
Release date:2020-05-06
Last modified:2020-07-08
Method:ELECTRON MICROSCOPY (3.05 Å)
Cite:Mechanisms of OCT4-SOX2 motif readout on nucleosomes.
Science, 368, 2020
6TA7
DownloadVisualize
BU of 6ta7 by Molmil
CRYSTAL STRUCTURE OF HUMAN G3BP1-NTF2 IN COMPLEX WITH HUMAN CAPRIN1-DERIVED SOLOMON MOTIF
Descriptor: CHLORIDE ION, Caprin-1, Ras GTPase-activating protein-binding protein 1, ...
Authors:Schulte, T, Achour, A, Panas, M.D, McInerney, G.M.
Deposit date:2019-10-29
Release date:2021-05-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Caprin-1 binding to the critical stress granule protein G3BP1 is regulated by pH
Biorxiv, 2021
6TB3
DownloadVisualize
BU of 6tb3 by Molmil
yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex
Descriptor: 25S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Buschauer, R, Cheng, J, Berninghausen, O, Tesina, P, Becker, T, Beckmann, R.
Deposit date:2019-10-31
Release date:2020-04-22
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:The Ccr4-Not complex monitors the translating ribosome for codon optimality.
Science, 368, 2020
6TH6
DownloadVisualize
BU of 6th6 by Molmil
Cryo-EM Structure of T. kodakarensis 70S ribosome
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M.
Deposit date:2019-11-18
Release date:2020-07-29
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Nature, 583, 2020
6TIT
DownloadVisualize
BU of 6tit by Molmil
VSV G_440
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
Authors:Albertini, A.A, Belot, L, Abouhamdan, A, Gaudin, Y.
Deposit date:2019-11-22
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Identification of a pH-Sensitive Switch in VSV-G and a Crystal Structure of the G Pre-fusion State Highlight the VSV-G Structural Transition Pathway.
Cell Rep, 32, 2020
6TNU
DownloadVisualize
BU of 6tnu by Molmil
Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.
Descriptor: 18S rRNA, 25S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Buschauer, R, Cheng, J, Berninghausen, O, Tesina, P, Becker, T, Beckmann, R.
Deposit date:2019-12-10
Release date:2020-04-22
Last modified:2020-04-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The Ccr4-Not complex monitors the translating ribosome for codon optimality.
Science, 368, 2020
6U1A
DownloadVisualize
BU of 6u1a by Molmil
Crystal Structure of Fluorescent Protein FusionRed
Descriptor: CALCIUM ION, NICKEL (II) ION, Red fluorescent protein
Authors:Pletnev, S, Muslinkina, L, Pletneva, N, Pletnev, V.Z.
Deposit date:2019-08-15
Release date:2020-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.09 Å)
Cite:Two independent routes of post-translational chemistry in fluorescent protein FusionRed.
Int.J.Biol.Macromol., 155, 2020
6U95
DownloadVisualize
BU of 6u95 by Molmil
Adeno-associated virus strain AAVhu.37 capsid icosahedral structure
Descriptor: Capsid protein VP1
Authors:Kaelber, J.T, Yost, S.A, Firlar, E, Mercer, A.C.
Deposit date:2019-09-06
Release date:2019-09-18
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Structure of the AAVhu.37 capsid by cryoelectron microscopy.
Acta Crystallogr.,Sect.F, 76, 2020
6UHJ
DownloadVisualize
BU of 6uhj by Molmil
X-ray Structure of C148 mGFP
Descriptor: C148 mGFP
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHK
DownloadVisualize
BU of 6uhk by Molmil
Crystal Structure of C176 mGFP
Descriptor: C176 mGFP
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHL
DownloadVisualize
BU of 6uhl by Molmil
Crystal Structure of C148 mGFP-scDNA-1
Descriptor: C148 mGFP-scDNA-1, UNKNOWN LIGAND
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020
6UHM
DownloadVisualize
BU of 6uhm by Molmil
Crystal Structure of a Physical Mixture of C148 mGFP and scDNA-1
Descriptor: C148 mGFP
Authors:Winegar, P.W, Hayes, O.G, McMillan, J.R, Figg, C.A, Focia, P.J, Mirkin, C.A.
Deposit date:2019-09-27
Release date:2020-03-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:DNA-Directed Protein Packing within Single Crystals.
Chem, 6, 2020

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon