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4J8V	X-ray structure of NCP145 with bound chlorido(eta-6-p-cymene)(N-phenyl-2-pyridinecarbothioamide)ruthenium(II) Descriptor: DNA (145-MER), Histone H2A, Histone H2B 1.1, ... Authors: Adhireksan, Z, Davey, C.A. Deposit date: 2013-02-15 Release date: 2013-05-08 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.58 Å) Cite: Novel metal(II) arene 2-pyridinecarbothioamides: a rationale to orally active organometallic anticancer agents CHEM SCI, 4, 2013
7RQC	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MFI-tripeptidyl-tRNA analog ACCA-IFM at 2.50A resolution Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... Authors: Syroegin, E.A, Flemmich, L, Klepacki, D, Vazquez-Laslop, N, Micura, R, Polikanov, Y.S. Deposit date: 2021-08-06 Release date: 2022-01-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol. Nat.Struct.Mol.Biol., 29, 2022
7RQB	Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site aminoacyl-tRNA analog ACC-PMN, and P-site MAI-tripeptidyl-tRNA analog ACCA-IAM at 2.45A resolution Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ... Authors: Syroegin, E.A, Flemmich, L, Klepacki, D, Vazquez-Laslop, N, Micura, R, Polikanov, Y.S. Deposit date: 2021-08-06 Release date: 2022-01-26 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2.45 Å) Cite: Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol. Nat.Struct.Mol.Biol., 29, 2022
4J8U	X-ray structure of NCP145 with chlorido(eta-6-p-cymene)(N-phenyl-2-pyridinecarbothioamide)osmium(II) Descriptor: DNA, Histone H2A type 1, Histone H2B 1.1, ... Authors: Adhireksan, Z, Davey, C.A. Deposit date: 2013-02-15 Release date: 2013-04-17 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.38 Å) Cite: Novel metal(II) arene 2-pyridinecarbothioamides: a rationale to orally active organometallic anticancer agents CHEM SCI, 4, 2013
7Q5B	Cryo-EM structure of Ty3 retrotransposon targeting a TFIIIB-bound tRNA gene Descriptor: DNA (19-MER), DNA (31-MER), DNA (34-MER), ... Authors: Abascal-Palacios, G, Jochem, L, Pla-Prats, C, Beuron, F, Vannini, A. Deposit date: 2021-11-03 Release date: 2022-01-26 Method: ELECTRON MICROSCOPY (3.98 Å) Cite: Structural basis of Ty3 retrotransposon integration at RNA Polymerase III-transcribed genes. Nat Commun, 12, 2021
4JI3	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy, F.V, Murphy, E.L, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3.35 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
4KVB	Thermus thermophilus HB27 30S ribosomal subunit lacking ribosomal protein S17 Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Murphy, E.L, Jogl, G. Deposit date: 2013-05-22 Release date: 2014-06-04 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (4.198 Å) Cite: Structural robustness of the ribosome inferred from the X-ray crystal structure of a 30S ribosomal subunit lacking ribosomal protein S17 To be Published
7Q4P	U2 snRNP after ATP-dependent remodelling Descriptor: PHD finger-like domain-containing protein 5A, Splicing factor 3A subunit 2, Splicing factor 3A subunit 3, ... Authors: Tholen, J, Galej, W.P. Deposit date: 2021-11-01 Release date: 2022-03-30 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.15 Å) Cite: Structural basis of branch site recognition by the human spliceosome. Science, 375, 2022
7Q3L	Human 17S U2 snRNP 5' domain Descriptor: HIV Tat-specific factor 1, PHD finger-like domain-containing protein 5A, Probable ATP-dependent RNA helicase DDX46, ... Authors: Tholen, J, Galej, W.P. Deposit date: 2021-10-28 Release date: 2022-03-30 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.21 Å) Cite: Structural basis of branch site recognition by the human spliceosome. Science, 375, 2022
1VWA	STREPTAVIDIN-FSHPQNT Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN Authors: Katz, B.A, Cass, R.T. Deposit date: 1997-03-03 Release date: 1998-03-18 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (1.85 Å) Cite: In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0. J.Biol.Chem., 272, 1997
7A5F	Structure of the stalled human mitoribosome with P- and E-site mt-tRNAs Descriptor: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ... Authors: Desai, N, Yang, H, Chandrasekaran, V, Kazi, R, Minczuk, M, Ramakrishnan, V. Deposit date: 2020-08-21 Release date: 2020-12-23 Method: ELECTRON MICROSCOPY (4.4 Å) Cite: Elongational stalling activates mitoribosome-associated quality control. Science, 370, 2020
7R5K	Human nuclear pore complex (constricted) Descriptor: Aladin, E3 SUMO-protein ligase RanBP2, Nuclear pore complex protein Nup107, ... Authors: Mosalaganti, S, Obarska-Kosinska, A, Siggel, M, Taniguchi, R, Turonova, B, Zimmerli, C.E, Buczak, K, Schmidt, F.H, Margiotta, E, Mackmull, M.T, Hagen, W.J.H, Hummer, G, Kosinski, J, Beck, M. Deposit date: 2022-02-10 Release date: 2022-06-22 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (12 Å) Cite: AI-based structure prediction empowers integrative structural analysis of human nuclear pores. Science, 376, 2022
7R5J	Human nuclear pore complex (dilated) Descriptor: Aladin, E3 SUMO-protein ligase RanBP2, Nuclear pore complex protein Nup107, ... Authors: Mosalaganti, S, Obarska-Kosinska, A, Siggel, M, Taniguchi, R, Turonova, B, Zimmerli, C.E, Buczak, K, Schmidt, F.H, Margiotta, E, Mackmull, M.T, Hagen, W.J.H, Hummer, G, Kosinski, J, Beck, M. Deposit date: 2022-02-10 Release date: 2022-09-21 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (50 Å) Cite: AI-based structure prediction empowers integrative structural analysis of human nuclear pores Science, 376, 2022
7PIA	70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. Deposit date: 2021-08-19 Release date: 2022-05-25 Last modified: 2022-10-19 Method: ELECTRON MICROSCOPY (13.6 Å) Cite: Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7PIQ	70S ribosome with A- and P-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Xue, L, Lenz, S, Rappsilber, J, Mahamid, J. Deposit date: 2021-08-23 Release date: 2022-05-25 Last modified: 2022-10-19 Method: ELECTRON MICROSCOPY (9.7 Å) Cite: Visualizing translation dynamics at atomic detail inside a bacterial cell. Nature, 610, 2022
7A23	Plant mitochondrial respiratory complex I Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 13kDa, 15kDa, ... Authors: Soufari, H, Waltz, F, Hashem, Y. Deposit date: 2020-08-15 Release date: 2020-10-28 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Specific features and assembly of the plant mitochondrial complex I revealed by cryo-EM. Nat Commun, 11, 2020
4LF7	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, PAROMOMYCIN, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.1484 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus To be Published, 2013
7ACR	Structure of post-translocated trans-translation complex on E. coli stalled ribosome. Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R. Deposit date: 2020-09-11 Release date: 2021-08-18 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Structures of tmRNA and SmpB as they transit through the ribosome. Nat Commun, 12, 2021
7R4X	Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Pellegrino, S, Dent, K.C, Spikes, T, Warren, A.J. Deposit date: 2022-02-09 Release date: 2023-02-22 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.15 Å) Cite: Cryo-EM reconstruction of the human 40S ribosomal subunit at 2.15 angstrom resolution. Nucleic Acids Res., 51, 2023
7AC7	Structure of accomodated trans-translation complex on E. Coli stalled ribosome. Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Guyomar, C, D'Urso, G, Chat, S, Giudice, E, Gillet, R. Deposit date: 2020-09-10 Release date: 2021-08-18 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Structures of tmRNA and SmpB as they transit through the ribosome. Nat Commun, 12, 2021
4JI1	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, MAGNESIUM ION, RIBOSOMAL PROTEIN S10, ... Authors: Demirci, H, Wang, L, Murphy IV, F, Murphy, E, Carr, J, Blanchard, S, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-03-05 Release date: 2013-11-06 Last modified: 2023-12-06 Method: X-RAY DIFFRACTION (3.144 Å) Cite: The central role of protein S12 in organizing the structure of the decoding site of the ribosome. Rna, 19, 2013
5VCP	Crystal structure of a peptide deformylase from Burkholderia xenovorans in complex with actinonin Descriptor: ACTINONIN, FE (II) ION, MAGNESIUM ION, ... Authors: Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2017-03-31 Release date: 2017-05-03 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of a peptide deformylase from Burkholderia xenovorans in complex with actinonin To be Published
6YST	Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis state Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... Authors: Chan, K.-H, Petrychenko, V, Mueller, C, Maracci, C, Holtkamp, W, Wilson, D.N, Fischer, N, Rodnina, M.V. Deposit date: 2020-04-23 Release date: 2020-08-19 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Mechanism of ribosome rescue by alternative ribosome-rescue factor B. Nat Commun, 11, 2020
7BEG	Structures of class I bacterial transcription complexes Descriptor: Class I pacrA promoter non-template DNA, Class I pacrA promoter template DNA, DNA-directed RNA polymerase subunit alpha, ... Authors: Ye, F.Z, Hao, M, Zhang, X.D. Deposit date: 2020-12-23 Release date: 2021-12-01 Last modified: 2024-07-10 Method: ELECTRON MICROSCOPY (4.2 Å) Cite: Structures of Class I and Class II Transcription Complexes Reveal the Molecular Basis of RamA-Dependent Transcription Activation. Adv Sci, 9, 2022
4LFA	Crystal Structure of 30S ribosomal subunit from Thermus thermophilus Descriptor: 16S rRNA, HYGROMYCIN B, MAGNESIUM ION, ... Authors: Demirci, H, Belardinelli, R, Carr, J, Murphy IV, F, Jogl, G, Dahlberg, A.E, Gregory, S.T. Deposit date: 2013-06-26 Release date: 2014-07-02 Method: X-RAY DIFFRACTION (3.6461 Å) Cite: Crystal Structure of 30S ribosomal subunit from Thermus thermophilus to be published, 2013

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